BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024580
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containin...   144   1e-32
ref|XP_003526333.1| PREDICTED: zinc finger CCCH domain-containin...   134   6e-30
ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containin...   129   2e-28
ref|XP_002309834.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
gb|ACN40315.1| unknown [Picea sitchensis]                             110   9e-23

>ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containing protein 13 [Vitis
           vinifera] gi|297739310|emb|CBI28961.3| unnamed protein
           product [Vitis vinifera]
          Length = 444

 Score =  144 bits (362), Expect = 1e-32
 Identities = 75/135 (55%), Positives = 93/135 (68%), Gaps = 4/135 (2%)
 Frame = +1

Query: 91  MVESKQLKTKLCVQYKKGRCSRQNCSFAHGDAELRRFSRSFSGRQDYRVGDLRDKIGRRH 270
           MVE K  KTKLCV Y++G C RQ CSFAHGDAELR FS SF+GR+DYR  DLRDK+ RRH
Sbjct: 1   MVERKLYKTKLCVLYERGHCPRQTCSFAHGDAELRGFSGSFNGRRDYRDDDLRDKLDRRH 60

Query: 271 SPIRRHSPGRDAR---ISQGYNTPRLFGRSSDSEH-RKRQLDARDDISRNLKISNSAEDN 438
           SP RR+SPGR AR   +  GY+  R  G+ SD +H RK+QLD + D S +L+IS+  +D 
Sbjct: 61  SPPRRYSPGRGARSRPVIHGYSPSRSVGKKSDRKHRRKQQLDGQSDFSGSLRISDGTDDR 120

Query: 439 VHDRKAMSLDSKEKL 483
           + + K     SK  L
Sbjct: 121 LKEGKLAPSGSKNVL 135


>ref|XP_003526333.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
           [Glycine max]
          Length = 399

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/136 (50%), Positives = 92/136 (67%), Gaps = 4/136 (2%)
 Frame = +1

Query: 91  MVESKQLKTKLCVQYKKGRCSRQNCSFAHGDAELRRFSRSFSGRQDYRVGDLRDKIGRRH 270
           MVE KQ KTKLCV Y++GRC+R NCSFAHG AELRRFS S+SGR+DY   DLRDK+ RRH
Sbjct: 1   MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSAELRRFSASYSGRRDYLDNDLRDKLDRRH 60

Query: 271 SPIRRHSPGRDAR---ISQGYNTPRLFGRSSDSEHRKRQ-LDARDDISRNLKISNSAEDN 438
              RR+SP  D R   I + Y+  R   + SD  +R++Q +  + D+S NLK+S+  +D 
Sbjct: 61  VSPRRYSPTPDTRGRQIIREYSPTRSLEKKSDRRYRRKQDITGQSDVSGNLKVSDRVQDR 120

Query: 439 VHDRKAMSLDSKEKLD 486
           V + K +S  S+  L+
Sbjct: 121 VKEGKLLSSGSRNNLE 136


>ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
           [Glycine max]
          Length = 417

 Score =  129 bits (324), Expect = 2e-28
 Identities = 67/136 (49%), Positives = 90/136 (66%), Gaps = 4/136 (2%)
 Frame = +1

Query: 91  MVESKQLKTKLCVQYKKGRCSRQNCSFAHGDAELRRFSRSFSGRQDYRVGDLRDKIGRRH 270
           MVE KQ KTKLCV Y++GRC+R NCSFAHG A+LRRFS S+SGR+DY   DLRDK+ RR+
Sbjct: 1   MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSADLRRFSASYSGRRDYLGNDLRDKLDRRY 60

Query: 271 SPIRRHSPGRDAR---ISQGYNTPRLFGRSSDSEHRKRQ-LDARDDISRNLKISNSAEDN 438
              RR+SP  D R   I + Y+      + SD  HR++Q  + + DIS NLK+S+  +  
Sbjct: 61  VSPRRYSPAPDTRGRQIIREYSPTMSLEKKSDRRHRRKQDTNGQSDISGNLKVSDRVQGQ 120

Query: 439 VHDRKAMSLDSKEKLD 486
           V + K +S  S+  L+
Sbjct: 121 VKEGKLLSSGSRNNLE 136


>ref|XP_002309834.1| predicted protein [Populus trichocarpa] gi|222852737|gb|EEE90284.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/131 (49%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
 Frame = +1

Query: 91  MVESKQLKTKLCVQYKKGRCSRQNCSFAHGDAELRRFSRSFSGRQDYRVGDLRDKIGRRH 270
           M E K  KTKLCV Y+KGRC RQNCSFAHG+AELR+   S  G +DYR GDLRDK+ +R 
Sbjct: 1   MAERKLFKTKLCVLYRKGRCHRQNCSFAHGNAELRQSMPSRYGTRDYRGGDLRDKLDQRL 60

Query: 271 SPIRRHSPGRDARISQGY--NTPRLFGRSSDSEHRKRQLDARDDISRNLKISNSAEDNVH 444
           SP R++SPG+DA     +  ++P      S    +K+Q D + D S +LK+S+ A+D V 
Sbjct: 61  SPKRQYSPGKDANRRDSFRGSSPSRSLEKSKKRRKKQQYDGQSDFSGSLKVSDRADDQVK 120

Query: 445 DRKAMSLDSKE 477
           +RK  S + KE
Sbjct: 121 ERKGASSELKE 131


>gb|ACN40315.1| unknown [Picea sitchensis]
          Length = 493

 Score =  110 bits (276), Expect = 9e-23
 Identities = 64/138 (46%), Positives = 81/138 (58%), Gaps = 14/138 (10%)
 Frame = +1

Query: 91  MVESKQLKTKLCVQYKKGRCSRQNCSFAHGDAELRRFSRSFSGRQDYRVGDLRDKIGRRH 270
           M +    KTKLC  Y++G C RQ+CSFAHGDAELRRFS S +GR+++R GDLRDK+ RRH
Sbjct: 2   MFDRDLYKTKLCTLYQRGHCPRQSCSFAHGDAELRRFSGSGNGRREHRSGDLRDKLDRRH 61

Query: 271 SPIRRHSPGRDARISQ------------GYNTPRLFGRSSDSEHRKRQ-LDAR-DDISRN 408
           SP RR SP RDA+  Q            G++  R   R S+   RKRQ LD    D+S N
Sbjct: 62  SPHRRSSPARDAKGRQTYADQRSLPHDRGHSLSRSPPRGSERRERKRQRLDRHIGDVSPN 121

Query: 409 LKISNSAEDNVHDRKAMS 462
                   D+ H ++  S
Sbjct: 122 FNYLGDDTDHDHTKEVKS 139