BLASTX nr result
ID: Bupleurum21_contig00024573
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00024573 (368 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28616.3| unnamed protein product [Vitis vinifera] 113 2e-23 emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera] 113 2e-23 ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containin... 108 3e-22 ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containin... 108 3e-22 ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|2... 108 6e-22 >emb|CBI28616.3| unnamed protein product [Vitis vinifera] Length = 672 Score = 113 bits (282), Expect = 2e-23 Identities = 54/94 (57%), Positives = 66/94 (70%) Frame = -3 Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181 ++RG+FSAC +PT LDS DP +LQLGARM YN+QD+LWRRK Q RRLM Sbjct: 373 VERGEFSACSTPTGLDSRDPYDLQLGARMFYNTQDMLWRRKLEEQADLQQAIELQGRRLM 432 Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHNR 79 L+LLD K+ H RA STGA + SPTHSP+F N+ Sbjct: 433 GLQLLDVKKQQHHRALSTGAPIPSPTHSPSFFNQ 466 >emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera] Length = 682 Score = 113 bits (282), Expect = 2e-23 Identities = 54/94 (57%), Positives = 66/94 (70%) Frame = -3 Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181 ++RG+FSAC +PT LDS DP +LQLGARM YN+QD+LWRRK Q RRLM Sbjct: 451 VERGEFSACSTPTGLDSRDPYDLQLGARMFYNTQDMLWRRKLEEQADLQQAIELQGRRLM 510 Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHNR 79 L+LLD K+ H RA STGA + SPTHSP+F N+ Sbjct: 511 GLQLLDVKKQQHHRALSTGAPIPSPTHSPSFFNQ 544 >ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like [Glycine max] Length = 700 Score = 108 bits (271), Expect = 3e-22 Identities = 54/94 (57%), Positives = 67/94 (71%) Frame = -3 Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181 +DRGDFS CG+PT LD+ D +LQLG RMLYN+QD+LWRRK Q+RRLM Sbjct: 447 VDRGDFSPCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRRLM 506 Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHNR 79 L+LLD K+ +HQRA STG+ + SPTHSPN N+ Sbjct: 507 GLQLLDIKK-HHQRALSTGSPIPSPTHSPNMFNQ 539 >ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like [Glycine max] Length = 696 Score = 108 bits (271), Expect = 3e-22 Identities = 54/94 (57%), Positives = 67/94 (71%) Frame = -3 Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181 +DRGDFS CG+PT LD+ D +LQLG RMLYN+QD+LWRRK Q+RRLM Sbjct: 441 VDRGDFSPCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRRLM 500 Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHNR 79 L+LLD K+ +HQRA STG+ + SPTHSPN N+ Sbjct: 501 GLQLLDIKK-HHQRALSTGSPIPSPTHSPNMFNQ 533 >ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|222841330|gb|EEE78877.1| predicted protein [Populus trichocarpa] Length = 680 Score = 108 bits (269), Expect = 6e-22 Identities = 54/93 (58%), Positives = 66/93 (70%) Frame = -3 Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181 ++RG+FS CG+PT LDS DP +LQLGARM YN+QD+LWRRK Q+RRLM Sbjct: 424 VERGEFSPCGTPTGLDSRDPFDLQLGARMFYNTQDMLWRRKLEEQADLQQALELQSRRLM 483 Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHN 82 SL+LLD K+ +H RA S G+ V SPTHSPN N Sbjct: 484 SLQLLDVKK-HHHRALSNGSPVPSPTHSPNIFN 515