BLASTX nr result

ID: Bupleurum21_contig00024573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024573
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28616.3| unnamed protein product [Vitis vinifera]              113   2e-23
emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]   113   2e-23
ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containin...   108   3e-22
ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containin...   108   3e-22
ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22

>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/94 (57%), Positives = 66/94 (70%)
 Frame = -3

Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181
           ++RG+FSAC +PT LDS DP +LQLGARM YN+QD+LWRRK             Q RRLM
Sbjct: 373 VERGEFSACSTPTGLDSRDPYDLQLGARMFYNTQDMLWRRKLEEQADLQQAIELQGRRLM 432

Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHNR 79
            L+LLD K+  H RA STGA + SPTHSP+F N+
Sbjct: 433 GLQLLDVKKQQHHRALSTGAPIPSPTHSPSFFNQ 466


>emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
          Length = 682

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/94 (57%), Positives = 66/94 (70%)
 Frame = -3

Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181
           ++RG+FSAC +PT LDS DP +LQLGARM YN+QD+LWRRK             Q RRLM
Sbjct: 451 VERGEFSACSTPTGLDSRDPYDLQLGARMFYNTQDMLWRRKLEEQADLQQAIELQGRRLM 510

Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHNR 79
            L+LLD K+  H RA STGA + SPTHSP+F N+
Sbjct: 511 GLQLLDVKKQQHHRALSTGAPIPSPTHSPSFFNQ 544


>ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Glycine max]
          Length = 700

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/94 (57%), Positives = 67/94 (71%)
 Frame = -3

Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181
           +DRGDFS CG+PT LD+ D  +LQLG RMLYN+QD+LWRRK             Q+RRLM
Sbjct: 447 VDRGDFSPCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRRLM 506

Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHNR 79
            L+LLD K+ +HQRA STG+ + SPTHSPN  N+
Sbjct: 507 GLQLLDIKK-HHQRALSTGSPIPSPTHSPNMFNQ 539


>ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Glycine max]
          Length = 696

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/94 (57%), Positives = 67/94 (71%)
 Frame = -3

Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181
           +DRGDFS CG+PT LD+ D  +LQLG RMLYN+QD+LWRRK             Q+RRLM
Sbjct: 441 VDRGDFSPCGTPTGLDARDQFDLQLGGRMLYNTQDMLWRRKLEEQADLQQALELQSRRLM 500

Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHNR 79
            L+LLD K+ +HQRA STG+ + SPTHSPN  N+
Sbjct: 501 GLQLLDIKK-HHQRALSTGSPIPSPTHSPNMFNQ 533


>ref|XP_002303898.1| predicted protein [Populus trichocarpa] gi|222841330|gb|EEE78877.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/93 (58%), Positives = 66/93 (70%)
 Frame = -3

Query: 360 MDRGDFSACGSPTSLDSSDPLNLQLGARMLYNSQDLLWRRKXXXXXXXXXXXXXQNRRLM 181
           ++RG+FS CG+PT LDS DP +LQLGARM YN+QD+LWRRK             Q+RRLM
Sbjct: 424 VERGEFSPCGTPTGLDSRDPFDLQLGARMFYNTQDMLWRRKLEEQADLQQALELQSRRLM 483

Query: 180 SLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFHN 82
           SL+LLD K+ +H RA S G+ V SPTHSPN  N
Sbjct: 484 SLQLLDVKK-HHHRALSNGSPVPSPTHSPNIFN 515


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