BLASTX nr result

ID: Bupleurum21_contig00024572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024572
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15107.3| unnamed protein product [Vitis vinifera]              168   6e-40
ref|XP_002280600.1| PREDICTED: microtubule-associated protein TO...   168   6e-40
ref|XP_002322140.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_003613461.1| Microtubule-associated protein TORTIFOLIA1 [...   145   3e-33

>emb|CBI15107.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  168 bits (425), Expect = 6e-40
 Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 16/189 (8%)
 Frame = -2

Query: 545 KINKISGTRTRPHPVPYPDSVSESTPK--NDKEYVYRNEKDSGDLSLIQKQLLQIENQQS 372
           K+NK  G R+    VP  +  SE+T +  N  E  +RN K+  DLSLI+KQL+QIENQQS
Sbjct: 310 KMNKFGGFRSGSRVVPCQEENSETTVEVSNTTEVPHRNHKECEDLSLIRKQLVQIENQQS 369

Query: 371 SLLHILQGFIGTSRNGMCALESRVHGLEMALDEISYELGVSTRRMSSTNSTAAMCCTLPG 192
           SLL++L+ F+G+S+NG+ +LE+RVHGLE+ALDEIS++L VS RRMSST++  A CC LPG
Sbjct: 370 SLLNLLEKFMGSSQNGLRSLETRVHGLELALDEISFDLAVSNRRMSSTDTAGATCCMLPG 429

Query: 191 TEFISSKFRRRT-----NSQLIDVH---------NMADENCRSSTIGPKDRRFRLQGGSA 54
            +F+SSKF R+T      S+    H          +A +N  + T   ++ RFRLQGG  
Sbjct: 430 ADFLSSKFWRKTEGRGSTSRFSPSHATQSGTAMRYIAGKNDNAGTFKSENLRFRLQGGGG 489

Query: 53  FILNPLAEV 27
           F++NPLAE+
Sbjct: 490 FVVNPLAEI 498


>ref|XP_002280600.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Vitis
           vinifera]
          Length = 638

 Score =  168 bits (425), Expect = 6e-40
 Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 16/189 (8%)
 Frame = -2

Query: 545 KINKISGTRTRPHPVPYPDSVSESTPK--NDKEYVYRNEKDSGDLSLIQKQLLQIENQQS 372
           K+NK  G R+    VP  +  SE+T +  N  E  +RN K+  DLSLI+KQL+QIENQQS
Sbjct: 427 KMNKFGGFRSGSRVVPCQEENSETTVEVSNTTEVPHRNHKECEDLSLIRKQLVQIENQQS 486

Query: 371 SLLHILQGFIGTSRNGMCALESRVHGLEMALDEISYELGVSTRRMSSTNSTAAMCCTLPG 192
           SLL++L+ F+G+S+NG+ +LE+RVHGLE+ALDEIS++L VS RRMSST++  A CC LPG
Sbjct: 487 SLLNLLEKFMGSSQNGLRSLETRVHGLELALDEISFDLAVSNRRMSSTDTAGATCCMLPG 546

Query: 191 TEFISSKFRRRT-----NSQLIDVH---------NMADENCRSSTIGPKDRRFRLQGGSA 54
            +F+SSKF R+T      S+    H          +A +N  + T   ++ RFRLQGG  
Sbjct: 547 ADFLSSKFWRKTEGRGSTSRFSPSHATQSGTAMRYIAGKNDNAGTFKSENLRFRLQGGGG 606

Query: 53  FILNPLAEV 27
           F++NPLAE+
Sbjct: 607 FVVNPLAEI 615


>ref|XP_002322140.1| predicted protein [Populus trichocarpa] gi|222869136|gb|EEF06267.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score =  152 bits (385), Expect = 2e-35
 Identities = 85/182 (46%), Positives = 118/182 (64%), Gaps = 14/182 (7%)
 Frame = -2

Query: 530 SGTRTRPHPVPYPDSVSESTPKNDKEYVYRNEKDSGDLSLIQKQLLQIENQQSSLLHILQ 351
           SG+R  P     P S   ++   + ++   N K+  DLSLI+ QL+QIE QQSSLL +LQ
Sbjct: 419 SGSRVAPCYEESPQSTVVASSGTENQH--SNHKEPEDLSLIRNQLVQIERQQSSLLDLLQ 476

Query: 350 GFIGTSRNGMCALESRVHGLEMALDEISYELGVSTRRMSSTNSTAAMCCTLPGTEFISSK 171
            FIG+S+NGM +LE+RVHGLE+ALDEISY+L VS+R M++ +S    CC LPG +F+SSK
Sbjct: 477 SFIGSSQNGMRSLETRVHGLELALDEISYDLAVSSRGMTNRDSNRTTCCLLPGADFLSSK 536

Query: 170 FRRRTNSQLID--------------VHNMADENCRSSTIGPKDRRFRLQGGSAFILNPLA 33
           F R+T+ +  +              V + AD N +S T    ++R RLQGG+ FI+NPLA
Sbjct: 537 FWRKTDGRYSNSRISSSRGTSLSAAVRHRADRNGQSETSNLGNQRLRLQGGAGFIVNPLA 596

Query: 32  EV 27
           E+
Sbjct: 597 EI 598


>ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|222859297|gb|EEE96844.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score =  147 bits (371), Expect = 1e-33
 Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 14/182 (7%)
 Frame = -2

Query: 530 SGTRTRPHPVPYPDSVSESTPKNDKEYVYRNEKDSGDLSLIQKQLLQIENQQSSLLHILQ 351
           SG+R  P     P S   ++   +  +   NE +  DLSLI+ QL+QIE QQSSLL +LQ
Sbjct: 432 SGSRVAPCHEESPHSTVVASSGTENHHSNHNECE--DLSLIRFQLVQIERQQSSLLDLLQ 489

Query: 350 GFIGTSRNGMCALESRVHGLEMALDEISYELGVSTRRMSSTNSTAAMCCTLPGTEFISSK 171
            FIG+S+NGM +LE+RV GLE+ALDEISY+L VS+ RM++T+S    CC LPG +F+SSK
Sbjct: 490 SFIGSSQNGMHSLETRVRGLELALDEISYDLAVSSGRMTNTDSNRTTCCLLPGADFLSSK 549

Query: 170 FRRRT-----NSQLID---------VHNMADENCRSSTIGPKDRRFRLQGGSAFILNPLA 33
           F ++T     NS++           V + AD N  S TI   ++R RLQGG   I+NPLA
Sbjct: 550 FWKKTEGRYSNSRIYSSRGTPLSAVVRHRADRNGHSETINLGNQRLRLQGGGGLIVNPLA 609

Query: 32  EV 27
           E+
Sbjct: 610 EI 611


>ref|XP_003613461.1| Microtubule-associated protein TORTIFOLIA1 [Medicago truncatula]
            gi|355514796|gb|AES96419.1| Microtubule-associated
            protein TORTIFOLIA1 [Medicago truncatula]
          Length = 750

 Score =  145 bits (367), Expect = 3e-33
 Identities = 85/190 (44%), Positives = 116/190 (61%), Gaps = 16/190 (8%)
 Frame = -2

Query: 545  KINKISGTRTRPHPVPYPDSVSESTPKNDKEYVYRNEKDSGDLSLIQKQLLQIENQQSSL 366
            KI K  G++ R  P    D +      N+   +  + +D  DLSLI+ QL+QIENQQS+L
Sbjct: 440  KIRKFGGSKARVVPCYDDDDLETDVTVNNDNEICESPQDVEDLSLIRDQLVQIENQQSNL 499

Query: 365  LHILQGFIGTSRNGMCALESRVHGLEMALDEISYELGVSTRRMSSTNSTAAMCCTLPGTE 186
            L +LQ FIGTS+NGM  LE+RV+GLEMALDEISY+L VS+ R+ +T++   MCC LPGT+
Sbjct: 500  LDLLQRFIGTSQNGMNLLETRVYGLEMALDEISYDLAVSSGRIPNTDAIDDMCCKLPGTD 559

Query: 185  FISSKFRRRTNSQLID-------------VHNMADENCRSSTIGPKDRRF---RLQGGSA 54
            F+SSKF ++T+S+                VHN  D N          +RF   R +GGS 
Sbjct: 560  FLSSKFWKKTDSRYTTSRLSFGSSASTNLVHNATDRNGSKEIFTTNSKRFQHRRDEGGS- 618

Query: 53   FILNPLAEVR 24
              +NPLAE++
Sbjct: 619  -FMNPLAEIQ 627


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