BLASTX nr result

ID: Bupleurum21_contig00024561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024561
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34978.3| unnamed protein product [Vitis vinifera]              182   1e-43
ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 4...   182   1e-43
emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera]   182   1e-43
ref|XP_002517400.1| Spotted leaf protein, putative [Ricinus comm...   172   1e-40
ref|XP_003543493.1| PREDICTED: U-box domain-containing protein 4...   167   6e-39

>emb|CBI34978.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  182 bits (462), Expect = 1e-43
 Identities = 102/183 (55%), Positives = 114/183 (62%)
 Frame = +3

Query: 615  KITSSQVFQQEEGLILLRKITRTGEIDRGDLCXXXXXXXXXXXXXXXYVSIQVNCAAALV 794
            K+ S QVF+QEE L+ LRKITRTGE  R  LC               Y  IQVN  A LV
Sbjct: 174  KLKSPQVFEQEEALVSLRKITRTGEETRVSLCSPRLLSMLRSLIISRYSGIQVNAVAVLV 233

Query: 795  NLSLENTNKVKIVRAGIVPPLIDVLRSGFPEAQEHAAGALFSLSLDDQNKTAIGVLGALQ 974
            NLSLE  NKVKIVR+GIVPPLIDVL+ GFPEAQ+HAAGALFSL+L+D NKTAIGVLGAL 
Sbjct: 234  NLSLEKINKVKIVRSGIVPPLIDVLKGGFPEAQDHAAGALFSLALEDANKTAIGVLGALP 293

Query: 975  PLVHXXXXXXXXXXXXXXXXXYHLTLVQSNRXXXXXXXXXXXXXDMVGSGHMSGRVLLIL 1154
            PL+H                 YHL+LVQSNR              MV SGH+  R LL+L
Sbjct: 294  PLLHTLRSESERARNDSALALYHLSLVQSNRTKLVKLGAVQILMGMVNSGHLWSRALLVL 353

Query: 1155 GNL 1163
             NL
Sbjct: 354  CNL 356



 Score =  108 bits (269), Expect = 3e-21
 Identities = 51/94 (54%), Positives = 70/94 (74%), Gaps = 3/94 (3%)
 Frame = +3

Query: 66  IGAKQQRWKISFHWSFKNNT---KHSHPPPEFLCPIAGTLMSDPVIVSSGHTFDRTSVEA 236
           +G  +QRW++ +  S  +N    +   PP EFLCPI+G+LM+DPVIVSSG TF+R  V+ 
Sbjct: 1   MGNGKQRWRVFYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACVQV 60

Query: 237 CLSLSFIPTLSDGSRPDFSTLIPNLALKSAILNY 338
           C +L F PTLS+GS PDFST+IPNLA++S IL++
Sbjct: 61  CKALGFNPTLSEGSSPDFSTIIPNLAIQSTILSW 94


>ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 40 [Vitis vinifera]
          Length = 519

 Score =  182 bits (462), Expect = 1e-43
 Identities = 102/183 (55%), Positives = 114/183 (62%)
 Frame = +3

Query: 615  KITSSQVFQQEEGLILLRKITRTGEIDRGDLCXXXXXXXXXXXXXXXYVSIQVNCAAALV 794
            K+ S QVF+QEE L+ LRKITRTGE  R  LC               Y  IQVN  A LV
Sbjct: 213  KLKSPQVFEQEEALVSLRKITRTGEETRVSLCSPRLLSMLRSLIISRYSGIQVNAVAVLV 272

Query: 795  NLSLENTNKVKIVRAGIVPPLIDVLRSGFPEAQEHAAGALFSLSLDDQNKTAIGVLGALQ 974
            NLSLE  NKVKIVR+GIVPPLIDVL+ GFPEAQ+HAAGALFSL+L+D NKTAIGVLGAL 
Sbjct: 273  NLSLEKINKVKIVRSGIVPPLIDVLKGGFPEAQDHAAGALFSLALEDANKTAIGVLGALP 332

Query: 975  PLVHXXXXXXXXXXXXXXXXXYHLTLVQSNRXXXXXXXXXXXXXDMVGSGHMSGRVLLIL 1154
            PL+H                 YHL+LVQSNR              MV SGH+  R LL+L
Sbjct: 333  PLLHTLRSESERARNDSALALYHLSLVQSNRTKLVKLGAVQILMGMVNSGHLWSRALLVL 392

Query: 1155 GNL 1163
             NL
Sbjct: 393  CNL 395



 Score =  108 bits (269), Expect = 3e-21
 Identities = 51/94 (54%), Positives = 70/94 (74%), Gaps = 3/94 (3%)
 Frame = +3

Query: 66  IGAKQQRWKISFHWSFKNNT---KHSHPPPEFLCPIAGTLMSDPVIVSSGHTFDRTSVEA 236
           +G  +QRW++ +  S  +N    +   PP EFLCPI+G+LM+DPVIVSSG TF+R  V+ 
Sbjct: 1   MGNGKQRWRVFYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACVQV 60

Query: 237 CLSLSFIPTLSDGSRPDFSTLIPNLALKSAILNY 338
           C +L F PTLS+GS PDFST+IPNLA++S IL++
Sbjct: 61  CKALGFNPTLSEGSSPDFSTIIPNLAIQSTILSW 94


>emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera]
          Length = 543

 Score =  182 bits (462), Expect = 1e-43
 Identities = 102/183 (55%), Positives = 114/183 (62%)
 Frame = +3

Query: 615  KITSSQVFQQEEGLILLRKITRTGEIDRGDLCXXXXXXXXXXXXXXXYVSIQVNCAAALV 794
            K+ S QVF+QEE L+ LRKITRTGE  R  LC               Y  IQVN  A LV
Sbjct: 241  KLKSPQVFEQEEALVSLRKITRTGEETRVSLCSPRLLSMLRSLIISRYSGIQVNAVAVLV 300

Query: 795  NLSLENTNKVKIVRAGIVPPLIDVLRSGFPEAQEHAAGALFSLSLDDQNKTAIGVLGALQ 974
            NLSLE  NKVKIVR+GIVPPLIDVL+ GFPEAQ+HAAGALFSL+L+D NKTAIGVLGAL 
Sbjct: 301  NLSLEKINKVKIVRSGIVPPLIDVLKGGFPEAQDHAAGALFSLALEDANKTAIGVLGALP 360

Query: 975  PLVHXXXXXXXXXXXXXXXXXYHLTLVQSNRXXXXXXXXXXXXXDMVGSGHMSGRVLLIL 1154
            PL+H                 YHL+LVQSNR              MV SGH+  R LL+L
Sbjct: 361  PLLHTLRSESERARNDSALALYHLSLVQSNRTKLVKLGAVQILMGMVNSGHLWSRALLVL 420

Query: 1155 GNL 1163
             NL
Sbjct: 421  CNL 423



 Score =  108 bits (269), Expect = 3e-21
 Identities = 51/94 (54%), Positives = 70/94 (74%), Gaps = 3/94 (3%)
 Frame = +3

Query: 66  IGAKQQRWKISFHWSFKNNT---KHSHPPPEFLCPIAGTLMSDPVIVSSGHTFDRTSVEA 236
           +G  +QRW++ +  S  +N    +   PP EFLCPI+G+LM+DPVIVSSG TF+R  V+ 
Sbjct: 29  MGNGKQRWRVFYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACVQV 88

Query: 237 CLSLSFIPTLSDGSRPDFSTLIPNLALKSAILNY 338
           C +L F PTLS+GS PDFST+IPNLA++S IL++
Sbjct: 89  CKALGFNPTLSEGSSPDFSTIIPNLAIQSTILSW 122


>ref|XP_002517400.1| Spotted leaf protein, putative [Ricinus communis]
            gi|223543411|gb|EEF44942.1| Spotted leaf protein,
            putative [Ricinus communis]
          Length = 558

 Score =  172 bits (436), Expect = 1e-40
 Identities = 98/183 (53%), Positives = 113/183 (61%)
 Frame = +3

Query: 615  KITSSQVFQQEEGLILLRKITRTGEIDRGDLCXXXXXXXXXXXXXXXYVSIQVNCAAALV 794
            K+ S QVF+ EE LI +RK+TRT E  R  LC               Y +IQVN  A LV
Sbjct: 244  KLRSPQVFEIEETLISIRKMTRTKEDTRIHLCTPRLLSALRSLVTSRYTNIQVNSVACLV 303

Query: 795  NLSLENTNKVKIVRAGIVPPLIDVLRSGFPEAQEHAAGALFSLSLDDQNKTAIGVLGALQ 974
            NLSLE +NKVKIVR+G+VP LIDVL+ GFP+AQEHA GA+FSL+LDD NKTAIGVLGAL 
Sbjct: 304  NLSLEKSNKVKIVRSGLVPLLIDVLKGGFPDAQEHACGAIFSLALDDHNKTAIGVLGALP 363

Query: 975  PLVHXXXXXXXXXXXXXXXXXYHLTLVQSNRXXXXXXXXXXXXXDMVGSGHMSGRVLLIL 1154
            PL+H                 YHL+LVQSNR              M+ SGHM  RVLLIL
Sbjct: 364  PLLHLLRSNSEGTRHDSALALYHLSLVQSNRTKLVKLGAVPILLGMIKSGHMRSRVLLIL 423

Query: 1155 GNL 1163
             NL
Sbjct: 424  CNL 426



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
 Frame = +3

Query: 78  QQRWKISFHWSFKNNTKHSHP----PPEFLCPIAGTLMSDPVIVSSGHTFDRTSVEACLS 245
           Q +WK+       +     +P    P EFLCPI+  LM+DPVIVSSGHTF+R+SV+AC +
Sbjct: 51  QPKWKVVSFRRSSSTKPQLNPKLEIPIEFLCPISNILMNDPVIVSSGHTFERSSVQACNT 110

Query: 246 LSFIPTLSDGSR-PDFSTLIPNLALKSAILNY 338
           L FIPTL+  +  PDFS +IPNLALKSAI+N+
Sbjct: 111 LGFIPTLTTNTTVPDFSAVIPNLALKSAIINW 142


>ref|XP_003543493.1| PREDICTED: U-box domain-containing protein 40-like [Glycine max]
          Length = 557

 Score =  167 bits (422), Expect = 6e-39
 Identities = 95/183 (51%), Positives = 114/183 (62%)
 Frame = +3

Query: 615  KITSSQVFQQEEGLILLRKITRTGEIDRGDLCXXXXXXXXXXXXXXXYVSIQVNCAAALV 794
            K+ + Q+   EE LI LRK+TR  E  R  LC               +V++QVN  A++V
Sbjct: 246  KLKNPQLNAIEEALISLRKLTRIREETRLQLCTPRLLSALRSLVLSKHVNVQVNALASVV 305

Query: 795  NLSLENTNKVKIVRAGIVPPLIDVLRSGFPEAQEHAAGALFSLSLDDQNKTAIGVLGALQ 974
            NLSLE +NKVKIVR+G+VPPLI+VL+ G  EAQEH AGALFSL+LDD NKTAIGVLG L 
Sbjct: 306  NLSLEKSNKVKIVRSGMVPPLIEVLKFGSSEAQEHGAGALFSLALDDDNKTAIGVLGGLA 365

Query: 975  PLVHXXXXXXXXXXXXXXXXXYHLTLVQSNRXXXXXXXXXXXXXDMVGSGHMSGRVLLIL 1154
            PL+H                 YHL+LVQSNR             +MV SGHM+GRVLLIL
Sbjct: 366  PLLHMLRSESERTRHDSALALYHLSLVQSNRSKMVKLGSVPVLLNMVKSGHMTGRVLLIL 425

Query: 1155 GNL 1163
            GNL
Sbjct: 426  GNL 428



 Score =  107 bits (267), Expect = 6e-21
 Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
 Frame = +3

Query: 42  KNKAPMAPI-GAKQQRWKISFHWSFKNNTKHSHPPPEFLCPIAGTLMSDPVIVSSGHTFD 218
           K   P+ P     + +WK  F +  K  T+   PP EFLCPI+ +LM DPVIVSSGH+++
Sbjct: 24  KESEPITPTPNTPKLKWKKIF-FQTKTKTQIQTPPEEFLCPISRSLMFDPVIVSSGHSYE 82

Query: 219 RTSVEACLSLSFIPTLSDGSRPDFSTLIPNLALKSAILNY 338
           R+SVEAC +++F P L DG+ PDFSTLIPNLALKSAIL +
Sbjct: 83  RSSVEACKNVNFTPQLPDGTTPDFSTLIPNLALKSAILKW 122


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