BLASTX nr result

ID: Bupleurum21_contig00024557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024557
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28838.3| unnamed protein product [Vitis vinifera]              247   2e-63
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...   245   7e-63
ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   230   2e-58
ref|XP_002321137.1| condensin complex components subunit [Populu...   223   2e-56
ref|XP_002881232.1| predicted protein [Arabidopsis lyrata subsp....   218   7e-55

>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  247 bits (630), Expect = 2e-63
 Identities = 120/177 (67%), Positives = 143/177 (80%)
 Frame = +3

Query: 6    LPEDCHYQPENLVKLFLRPNVMCLGRSKRKSSAELGHQMDDYDKMPSWDDEAGFADHFDD 185
            LPEDCHYQPENLVKLFL PN+MCLGR +R+ S E   Q+DD+   PSWDDE GF D FD+
Sbjct: 483  LPEDCHYQPENLVKLFLLPNIMCLGRRRRRFSDESRQQVDDFGVSPSWDDENGFDDAFDN 542

Query: 186  GNNYSDVDESNTLVSQPRQVNKIEVQYDRKSKQVDVQALKETLWESLRESQLQSVEAQGG 365
            GN +SD+++S+TLVSQPRQVNKIEVQYD+ SKQVDVQALKETLW  +++S   SV+ +  
Sbjct: 543  GNFHSDLEDSSTLVSQPRQVNKIEVQYDKTSKQVDVQALKETLWGHMQKSTQSSVKDE-E 601

Query: 366  TISFKHTLATFPDDCKAAASLNDISPHLCFIALLHLANEHGLSIQSCGSLDDLSICL 536
             +SF+H LA+FPD  +AAA++ DISPHLCFI LLHLANEHGLSI  C  LDDLSI L
Sbjct: 602  AVSFRHILASFPDHSRAAAAMEDISPHLCFICLLHLANEHGLSINGCADLDDLSIHL 658


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score =  245 bits (625), Expect = 7e-63
 Identities = 120/181 (66%), Positives = 142/181 (78%), Gaps = 4/181 (2%)
 Frame = +3

Query: 6    LPEDCHYQPENLVKLFLRPNVMCLGRSKRKSSAELGHQMDDYDKMPSWDDEAGFADHFDD 185
            LPEDCHYQPENLVKLFL PN+MCLGR +R+ S E   Q+DD+   PSWDDE GF D FD+
Sbjct: 483  LPEDCHYQPENLVKLFLLPNIMCLGRRRRRFSDESRQQVDDFGVSPSWDDENGFDDAFDN 542

Query: 186  GNNYSDVDESNTLVSQPRQVNKIEVQYDRKSKQVDVQALKETLWESLRESQLQSVEA--- 356
            GN +SD+++S+TLVSQPRQVNKIEVQYD+ SKQVDVQALKETLW  +++S   SV+    
Sbjct: 543  GNFHSDLEDSSTLVSQPRQVNKIEVQYDKTSKQVDVQALKETLWGHMQKSTQSSVKVSEY 602

Query: 357  -QGGTISFKHTLATFPDDCKAAASLNDISPHLCFIALLHLANEHGLSIQSCGSLDDLSIC 533
                 +SF+H LA+FPD  +AAA++ DISPHLCFI LLHLANEHGLSI  C  LDDLSI 
Sbjct: 603  LDEEAVSFRHILASFPDHSRAAAAMEDISPHLCFICLLHLANEHGLSINGCADLDDLSIH 662

Query: 534  L 536
            L
Sbjct: 663  L 663


>ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
            [Cucumis sativus] gi|449490353|ref|XP_004158580.1|
            PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit
            2-like [Cucumis sativus]
          Length = 667

 Score =  230 bits (586), Expect = 2e-58
 Identities = 113/180 (62%), Positives = 135/180 (75%), Gaps = 5/180 (2%)
 Frame = +3

Query: 6    LPEDCHYQPENLVKLFLRPNVMCLGRSKRKSSAELGHQMDDYDKMPSWDDEAGFADHFDD 185
            LPEDCHYQPE+LVKLFL PNV CL R  R+ S E  H  DDY  MPSW+D+  F   FD+
Sbjct: 482  LPEDCHYQPEDLVKLFLLPNVKCLRRKGRQHSDEPMHHNDDYGTMPSWEDDNDFGGQFDE 541

Query: 186  GNNYSDVDESNTLVSQPRQVNKIEVQYDRKSKQVDVQALKETLWESLRESQLQSVEAQGG 365
            G+  SDV++ + LV+QPRQVNK+EVQYD+KSKQVDVQALKETLW  L+ESQ  +  +   
Sbjct: 542  GDGQSDVEDPDALVTQPRQVNKVEVQYDKKSKQVDVQALKETLWSHLQESQTDTEVSXHA 601

Query: 366  TI-----SFKHTLATFPDDCKAAASLNDISPHLCFIALLHLANEHGLSIQSCGSLDDLSI 530
             +     SFK  LATFPDDC+AA ++NDISPHLCFI LLHLANEHGLSI+    L+DL+I
Sbjct: 602  QLLYEMASFKQILATFPDDCRAAQTINDISPHLCFICLLHLANEHGLSIKGSDHLNDLTI 661


>ref|XP_002321137.1| condensin complex components subunit [Populus trichocarpa]
           gi|222861910|gb|EEE99452.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 605

 Score =  223 bits (569), Expect = 2e-56
 Identities = 109/176 (61%), Positives = 130/176 (73%)
 Frame = +3

Query: 3   TLPEDCHYQPENLVKLFLRPNVMCLGRSKRKSSAELGHQMDDYDKMPSWDDEAGFADHFD 182
           TLPEDCHYQPE+L KLFL PN+M           E   Q DD   +PSWD E+ FA  FD
Sbjct: 435 TLPEDCHYQPEDLAKLFLLPNIMI---------DETRQQADDCGPLPSWDGESAFAGQFD 485

Query: 183 DGNNYSDVDESNTLVSQPRQVNKIEVQYDRKSKQVDVQALKETLWESLRESQLQSVEAQG 362
           DG+ YSDV++ NTLV+QPRQVNKIEV YD+ SKQVDVQ LKETLW  ++ES    V+ Q 
Sbjct: 486 DGDAYSDVEDPNTLVTQPRQVNKIEVHYDKASKQVDVQTLKETLWHHIQESPQMPVQDQE 545

Query: 363 GTISFKHTLATFPDDCKAAASLNDISPHLCFIALLHLANEHGLSIQSCGSLDDLSI 530
             +SF+  LA+FP DC+AAA++ +ISPHLCFI LLHLANEHGLSI+ C SL+DLSI
Sbjct: 546 EAVSFRDLLASFPSDCRAAATIKEISPHLCFICLLHLANEHGLSIRGCASLNDLSI 601


>ref|XP_002881232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297327071|gb|EFH57491.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 704

 Score =  218 bits (556), Expect = 7e-55
 Identities = 115/191 (60%), Positives = 138/191 (72%), Gaps = 14/191 (7%)
 Frame = +3

Query: 6    LPEDCHYQPENLVKLFLRPNVMCLGRSKRKSSAELGHQM-DDYDKMPSWDDEAGFADH-- 176
            LPEDCHYQPENL+KLFL PNVMCLGR +RKSS E   Q  DDY+   SW ++  + D   
Sbjct: 513  LPEDCHYQPENLIKLFLLPNVMCLGRRRRKSSGETSRQQHDDYEHAESWGNDNVYDDDGT 572

Query: 177  FDDGNNYSDVDESNTLVSQPRQVNKIEVQYDRKSKQVDVQALKETLWESLRESQ------ 338
            FD+GN+ SD +++N+L+SQPRQVNKIEVQYD+ SKQVDVQ LKETLWE L+ES       
Sbjct: 573  FDNGNDQSDAEDTNSLISQPRQVNKIEVQYDKASKQVDVQVLKETLWECLQESHQPPIQN 632

Query: 339  --LQSVEAQ---GGTISFKHTLATFPDDCKAAASLNDISPHLCFIALLHLANEHGLSIQS 503
              +Q  E Q     + SFK  LA+FPDDC+AA +  DISPHLCFI LLHLANEH LS+  
Sbjct: 633  LIVQDEEHQQEPPESRSFKELLASFPDDCQAAGATQDISPHLCFICLLHLANEHNLSLVG 692

Query: 504  CGSLDDLSICL 536
              +LDDL+I L
Sbjct: 693  SQNLDDLTIHL 703


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