BLASTX nr result

ID: Bupleurum21_contig00024554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024554
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524235.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
ref|XP_002316258.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002311191.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002524235.1| conserved hypothetical protein [Ricinus communis]
           gi|223536512|gb|EEF38159.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 337

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/95 (38%), Positives = 53/95 (55%)
 Frame = +1

Query: 4   ISMAISTQLSLIFYFFSVLTSTQSVQLDAAGKSMYLSPRILFSNYEKMISAFKIYIYDXX 183
           ++M+IS  LSL   FFS+ TS     L  +  S+YLSP + F NY++M+ +FKIY Y   
Sbjct: 1   MTMSIS-HLSLFLVFFSLYTS-----LSQSSTSLYLSPALFFPNYQRMLQSFKIYTY--T 52

Query: 184 XXXXXXXXXXXESNFYSGLLRSNFRTEIADEAHLF 288
                      ES F++ L  S+F T   ++AHLF
Sbjct: 53  PPQPFSFTSPVESLFFTSLQNSHFITLNPEQAHLF 87


>ref|XP_002316258.1| predicted protein [Populus trichocarpa] gi|222865298|gb|EEF02429.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = +1

Query: 28  LSLIFYFF--SVLTSTQSVQLDAAGKSMYLSPRILFSNYEKMISAFKIYIYDXXXXXXXX 201
           +S   YF   S+LTS     +D+   S+YLSP ILF +Y+ M+ +FKIYIY         
Sbjct: 1   MSTFIYFLCLSLLTSVSKSMIDST--SLYLSPTILFPDYQNMLISFKIYIY--TPPNALS 56

Query: 202 XXXXXESNFYSGLLRSNFRTEIADEAHLF 288
                ESNF++ L  S F T+  +EAHL+
Sbjct: 57  FSSPTESNFFTCLQNSPFVTQNPEEAHLY 85


>ref|XP_002311191.1| predicted protein [Populus trichocarpa] gi|222851011|gb|EEE88558.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = +1

Query: 28  LSLIFYFF--SVLTSTQSVQLDAAGKSMYLSPRILFSNYEKMISAFKIYIYDXXXXXXXX 201
           +S I YF   S+LTS      D+   S+YLSP I F NY+ M+++FKIYIY         
Sbjct: 1   MSTIIYFLCLSLLTSVSKSINDST--SLYLSPTIFFPNYQNMLNSFKIYIY--TPSKPFS 56

Query: 202 XXXXXESNFYSGLLRSNFRTEIADEAHLF 288
                ES F++ L  S F T+  +EAHLF
Sbjct: 57  FSSPTESLFFTSLQASPFVTQNPEEAHLF 85


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