BLASTX nr result

ID: Bupleurum21_contig00024553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024553
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A,...    87   2e-33
gb|AFK34094.1| unknown [Lotus japonicus]                               82   4e-33
emb|CBI24768.3| unnamed protein product [Vitis vinifera]               82   2e-32
gb|ABS50432.1| chilling-responsive protein [Nicotiana tabacum]         85   2e-32
emb|CAN78553.1| hypothetical protein VITISV_042205 [Vitis vinifera]    82   2e-32

>ref|XP_002533345.1| Late embryogenesis abundant protein Lea14-A, putative [Ricinus
           communis] gi|223526810|gb|EEF29030.1| Late embryogenesis
           abundant protein Lea14-A, putative [Ricinus communis]
          Length = 313

 Score = 87.4 bits (215), Expect(3) = 2e-33
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = -3

Query: 167 LKKADIVVDVLIKNPNPIPFPLVDINYLIESDGRKLLSGLIPDAG 33
           L+KADIVVDVLIKNPNP+P PLVDINYLIESDGRKL+SGLIPDAG
Sbjct: 65  LEKADIVVDVLIKNPNPVPIPLVDINYLIESDGRKLISGLIPDAG 109



 Score = 78.6 bits (192), Expect(3) = 2e-33
 Identities = 40/69 (57%), Positives = 46/69 (66%)
 Frame = -2

Query: 363 MSSSDTPEVVARGVXXXXXXXXXXKGGHFGTIKGFVQDIGEKIEETVGFGKPTADVTAIH 184
           M+SSD PEVV R V           GG    +K F+ DIGEKIEE +GFGKPTADVT +H
Sbjct: 1   MASSDKPEVVDRDVKDKDDKDEEK-GGFIDKVKDFIHDIGEKIEEAIGFGKPTADVTGVH 59

Query: 183 IPKINLEKS 157
           IP INLEK+
Sbjct: 60  IPSINLEKA 68



 Score = 22.3 bits (46), Expect(3) = 2e-33
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 37  LESHGSETIKIP 2
           + +HG ET+KIP
Sbjct: 111 IRAHGEETVKIP 122


>gb|AFK34094.1| unknown [Lotus japonicus]
          Length = 188

 Score = 82.4 bits (202), Expect(3) = 4e-33
 Identities = 41/70 (58%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
 Frame = -2

Query: 363 MSSSDTPEVVARGVXXXXXXXXXXK-GGHFGTIKGFVQDIGEKIEETVGFGKPTADVTAI 187
           MS+SD PEVV RG           + GG   T+KGF+QDIG+KIE  +GFGKPTADVT I
Sbjct: 1   MSTSDKPEVVERGAKDEKHKEGDDEKGGFLNTVKGFIQDIGDKIEGAIGFGKPTADVTGI 60

Query: 186 HIPKINLEKS 157
           HIP INL+K+
Sbjct: 61  HIPSINLDKA 70



 Score = 82.0 bits (201), Expect(3) = 4e-33
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 167 LKKADIVVDVLIKNPNPIPFPLVDINYLIESDGRKLLSGLIPDAG 33
           L KAD+VVD+LIKNPNP+P PL+DINY++ESDGRKL+SGLIPD+G
Sbjct: 67  LDKADLVVDILIKNPNPVPIPLIDINYVVESDGRKLVSGLIPDSG 111



 Score = 22.7 bits (47), Expect(3) = 4e-33
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 37  LESHGSETIKIP 2
           + +HG ETIKIP
Sbjct: 113 IHAHGEETIKIP 124


>emb|CBI24768.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 82.4 bits (202), Expect(3) = 2e-32
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = -3

Query: 176 KSTLKKADIVVDVLIKNPNPIPFPLVDINYLIESDGRKLLSGLIPDAG 33
           K  L++ADIV+DVL+ NPNPIP PLVDI+YLIESDGRKL+SGLIPDAG
Sbjct: 148 KINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIPDAG 195



 Score = 78.2 bits (191), Expect(3) = 2e-32
 Identities = 40/69 (57%), Positives = 45/69 (65%)
 Frame = -2

Query: 363 MSSSDTPEVVARGVXXXXXXXXXXKGGHFGTIKGFVQDIGEKIEETVGFGKPTADVTAIH 184
           MSSSD PE V              KGG    +K F+ DIGEKIEE +GFGKPTADVT IH
Sbjct: 86  MSSSDKPEEVVERDAKEKDDKNEEKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADVTGIH 145

Query: 183 IPKINLEKS 157
           IPKINLE++
Sbjct: 146 IPKINLERA 154



 Score = 23.9 bits (50), Expect(3) = 2e-32
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 37  LESHGSETIKIP 2
           + +HGSET+KIP
Sbjct: 197 INAHGSETVKIP 208


>gb|ABS50432.1| chilling-responsive protein [Nicotiana tabacum]
          Length = 320

 Score = 85.1 bits (209), Expect(3) = 2e-32
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = -3

Query: 167 LKKADIVVDVLIKNPNPIPFPLVDINYLIESDGRKLLSGLIPDAG 33
           LKKA+IVVDVL+KNPNP+P PL+DINYLI+SDGRKL+SGLIPDAG
Sbjct: 71  LKKAEIVVDVLVKNPNPVPIPLIDINYLIDSDGRKLVSGLIPDAG 115



 Score = 75.5 bits (184), Expect(3) = 2e-32
 Identities = 41/74 (55%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
 Frame = -2

Query: 363 MSSSDTPEVVARGVXXXXXXXXXXK-----GGHFGTIKGFVQDIGEKIEETVGFGKPTAD 199
           MSSS+ PE+V R            K     GG    +K F+QDIGEKIEET+GFGKPTAD
Sbjct: 1   MSSSENPEIVERVFGDKEKEEKEDKKDEQKGGFIEKVKDFIQDIGEKIEETIGFGKPTAD 60

Query: 198 VTAIHIPKINLEKS 157
           VT IHIP INL+K+
Sbjct: 61  VTEIHIPHINLKKA 74



 Score = 23.9 bits (50), Expect(3) = 2e-32
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 37  LESHGSETIKIP 2
           + +HGSET+KIP
Sbjct: 117 IHAHGSETVKIP 128


>emb|CAN78553.1| hypothetical protein VITISV_042205 [Vitis vinifera]
          Length = 317

 Score = 82.4 bits (202), Expect(3) = 2e-32
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = -3

Query: 176 KSTLKKADIVVDVLIKNPNPIPFPLVDINYLIESDGRKLLSGLIPDAG 33
           K  L++ADIV+DVL+ NPNPIP PLVDI+YLIESDGRKL+SGLIPDAG
Sbjct: 63  KINLERADIVIDVLVTNPNPIPIPLVDIDYLIESDGRKLVSGLIPDAG 110



 Score = 78.2 bits (191), Expect(3) = 2e-32
 Identities = 40/69 (57%), Positives = 45/69 (65%)
 Frame = -2

Query: 363 MSSSDTPEVVARGVXXXXXXXXXXKGGHFGTIKGFVQDIGEKIEETVGFGKPTADVTAIH 184
           MSSSD PE V              KGG    +K F+ DIGEKIEE +GFGKPTADVT IH
Sbjct: 1   MSSSDKPEEVVERDAKEKDDKNEEKGGFIEKVKDFIHDIGEKIEEAIGFGKPTADVTGIH 60

Query: 183 IPKINLEKS 157
           IPKINLE++
Sbjct: 61  IPKINLERA 69



 Score = 23.9 bits (50), Expect(3) = 2e-32
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 37  LESHGSETIKIP 2
           + +HGSET+KIP
Sbjct: 112 INAHGSETVKIP 123


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