BLASTX nr result
ID: Bupleurum21_contig00024548
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00024548 (620 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vit... 344 8e-93 ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Rici... 341 7e-92 ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|2... 337 8e-91 gb|AEL98819.1| AP-1 complex subunit gamma-1, partial [Silene lat... 335 5e-90 gb|AAD14483.1| Strong similarity to gb|AF061286 gamma-adaptin 1 ... 333 2e-89 >ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vitis vinifera] gi|296086533|emb|CBI32122.3| unnamed protein product [Vitis vinifera] Length = 878 Score = 344 bits (882), Expect = 8e-93 Identities = 174/206 (84%), Positives = 187/206 (90%) Frame = -2 Query: 619 CTDGLVKILKDVVNSPYAPEYDIAGIADPFXXXXXXXXXXXXXXGDADASDCMNDILAQV 440 CT+ LVK+LKDVVNSPYAPEYDIAGI DPF GDADASDCMNDILAQV Sbjct: 219 CTEVLVKVLKDVVNSPYAPEYDIAGITDPFLHIRLLRLLRVLGQGDADASDCMNDILAQV 278 Query: 439 ATKTESNKNAGNAVLYECVDTIMSIEDNSGLRVLAINILGRFLSNRDNNIRYVALNMLMR 260 ATKTESNKNAGNA+LYECV+TIMSIED SGLRVLAINILGRFLSNRDNNIRYVALNMLM+ Sbjct: 279 ATKTESNKNAGNAILYECVETIMSIEDTSGLRVLAINILGRFLSNRDNNIRYVALNMLMK 338 Query: 259 AITVDSQAVQRHRATILECVKDSDASIRKKALELIYLLVNENNVMSLSKELINYLEVSDP 80 AITVD+QAVQRHRATILECVKDSDASIRK+ALELIY+LVN++NV L+KELI+YLEVSDP Sbjct: 339 AITVDAQAVQRHRATILECVKDSDASIRKRALELIYVLVNDSNVKPLAKELIDYLEVSDP 398 Query: 79 EFKGDLTAKICSLVEKFSPEKIWYID 2 EFKGDLTAKICS+VEKFSPEKIWYID Sbjct: 399 EFKGDLTAKICSIVEKFSPEKIWYID 424 >ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Ricinus communis] gi|223539863|gb|EEF41443.1| AP-1 complex subunit gamma-2, putative [Ricinus communis] Length = 875 Score = 341 bits (874), Expect = 7e-92 Identities = 173/206 (83%), Positives = 184/206 (89%) Frame = -2 Query: 619 CTDGLVKILKDVVNSPYAPEYDIAGIADPFXXXXXXXXXXXXXXGDADASDCMNDILAQV 440 CTDGLV+ L+DVVNSPYAPEYDIAGI DPF GDADASD MNDILAQV Sbjct: 219 CTDGLVRTLRDVVNSPYAPEYDIAGITDPFLHIRLLRLLRMLGQGDADASDAMNDILAQV 278 Query: 439 ATKTESNKNAGNAVLYECVDTIMSIEDNSGLRVLAINILGRFLSNRDNNIRYVALNMLMR 260 ATKTESNKNAGNA+LYECV+TIMSIEDN GLRVLAINILGRFLSNRDNNIRYVALNMLM+ Sbjct: 279 ATKTESNKNAGNAILYECVETIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMK 338 Query: 259 AITVDSQAVQRHRATILECVKDSDASIRKKALELIYLLVNENNVMSLSKELINYLEVSDP 80 AITVD+QAVQRHRATILECVKDSDASIRK+ALEL+YLLVNE+NV L+KELI YLEVSD Sbjct: 339 AITVDAQAVQRHRATILECVKDSDASIRKRALELVYLLVNESNVKPLTKELIEYLEVSDQ 398 Query: 79 EFKGDLTAKICSLVEKFSPEKIWYID 2 EFKGDLTAKICS+VEKFSPEKIWYID Sbjct: 399 EFKGDLTAKICSIVEKFSPEKIWYID 424 >ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|222855073|gb|EEE92620.1| predicted protein [Populus trichocarpa] Length = 877 Score = 337 bits (865), Expect = 8e-91 Identities = 172/205 (83%), Positives = 184/205 (89%) Frame = -2 Query: 616 TDGLVKILKDVVNSPYAPEYDIAGIADPFXXXXXXXXXXXXXXGDADASDCMNDILAQVA 437 T+GLV+ LKDVVNSPYAPEYDIAGIADPF GDADASD MNDILAQVA Sbjct: 220 TEGLVRTLKDVVNSPYAPEYDIAGIADPFLHVRLLKLLRALGQGDADASDAMNDILAQVA 279 Query: 436 TKTESNKNAGNAVLYECVDTIMSIEDNSGLRVLAINILGRFLSNRDNNIRYVALNMLMRA 257 TKTESNKNAGNA+LYECV+TIMSIEDN GLRVLAINILGRFLSNRDNNIRYVALNMLM+A Sbjct: 280 TKTESNKNAGNAILYECVETIMSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKA 339 Query: 256 ITVDSQAVQRHRATILECVKDSDASIRKKALELIYLLVNENNVMSLSKELINYLEVSDPE 77 ITVD+QAVQRHRATILECVKDSDASIRK+ALEL+Y+LVNE NV L+KELI+YLEVSD E Sbjct: 340 ITVDAQAVQRHRATILECVKDSDASIRKRALELVYVLVNETNVKPLTKELIDYLEVSDEE 399 Query: 76 FKGDLTAKICSLVEKFSPEKIWYID 2 FKGDLTAKICS+VEKFSPEKIWYID Sbjct: 400 FKGDLTAKICSIVEKFSPEKIWYID 424 >gb|AEL98819.1| AP-1 complex subunit gamma-1, partial [Silene latifolia] Length = 878 Score = 335 bits (858), Expect = 5e-90 Identities = 168/206 (81%), Positives = 181/206 (87%) Frame = -2 Query: 619 CTDGLVKILKDVVNSPYAPEYDIAGIADPFXXXXXXXXXXXXXXGDADASDCMNDILAQV 440 CTD +V++LKD+VNS YAPEYD+AGI DPF GDADASDCMNDILAQV Sbjct: 219 CTDAVVRVLKDLVNSSYAPEYDVAGITDPFLHIRLLRFLRVLGHGDADASDCMNDILAQV 278 Query: 439 ATKTESNKNAGNAVLYECVDTIMSIEDNSGLRVLAINILGRFLSNRDNNIRYVALNMLMR 260 ATKTESNKNAGNA+LYECVDTIMSIEDNSGLRVLAINILGRFLSN+DNNIRYVALNMLMR Sbjct: 279 ATKTESNKNAGNAILYECVDTIMSIEDNSGLRVLAINILGRFLSNKDNNIRYVALNMLMR 338 Query: 259 AITVDSQAVQRHRATILECVKDSDASIRKKALELIYLLVNENNVMSLSKELINYLEVSDP 80 AI VDSQAVQRHR TILECVKDSDASIRK+ALEL+YLLVNE+NV L+KELI YLE SD Sbjct: 339 AINVDSQAVQRHRTTILECVKDSDASIRKRALELVYLLVNESNVKPLTKELIEYLEASDH 398 Query: 79 EFKGDLTAKICSLVEKFSPEKIWYID 2 EFKGDL+ KICS+VEKFSPEKIWYID Sbjct: 399 EFKGDLSTKICSIVEKFSPEKIWYID 424 >gb|AAD14483.1| Strong similarity to gb|AF061286 gamma-adaptin 1 from Arabidopsis thaliana. EST gb|H37393 comes from this gene [Arabidopsis thaliana] Length = 867 Score = 333 bits (853), Expect = 2e-89 Identities = 165/206 (80%), Positives = 183/206 (88%) Frame = -2 Query: 619 CTDGLVKILKDVVNSPYAPEYDIAGIADPFXXXXXXXXXXXXXXGDADASDCMNDILAQV 440 CT+GLVK L+D+ NSPY+PEYD+AGI DPF GDADASDCMNDILAQV Sbjct: 219 CTEGLVKTLRDIANSPYSPEYDVAGITDPFLHIRLLKLLRVLGQGDADASDCMNDILAQV 278 Query: 439 ATKTESNKNAGNAVLYECVDTIMSIEDNSGLRVLAINILGRFLSNRDNNIRYVALNMLMR 260 A+KTESNKNAGNA+LYECV TIMSIE+N GLRVLAINILG+FLSNRDNNIRYVALNMLMR Sbjct: 279 ASKTESNKNAGNAILYECVQTIMSIEENGGLRVLAINILGKFLSNRDNNIRYVALNMLMR 338 Query: 259 AITVDSQAVQRHRATILECVKDSDASIRKKALELIYLLVNENNVMSLSKELINYLEVSDP 80 ++TVDSQAVQRHRATILECVKDSDASI+K+ALELIYLLVNENNV L+KELI YLEVS+ Sbjct: 339 SLTVDSQAVQRHRATILECVKDSDASIQKRALELIYLLVNENNVKPLAKELIEYLEVSEQ 398 Query: 79 EFKGDLTAKICSLVEKFSPEKIWYID 2 +FKGDLTAKICS+VEKF+PEKIWYID Sbjct: 399 DFKGDLTAKICSIVEKFAPEKIWYID 424