BLASTX nr result

ID: Bupleurum21_contig00024545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024545
         (1812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   123   1e-25
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               98   8e-18
ref|NP_198999.1| putative F-box/LRR-repeat protein [Arabidopsis ...    97   2e-17
ref|NP_197662.2| F-box/FBD/LRR-repeat protein [Arabidopsis thali...    95   5e-17
dbj|BAB11676.1| unnamed protein product [Arabidopsis thaliana] g...    95   5e-17

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  123 bits (309), Expect = 1e-25
 Identities = 124/441 (28%), Positives = 194/441 (43%), Gaps = 31/441 (7%)
 Frame = -1

Query: 1428 DRISTLPDELLCHIISYLPLKDAIRTSTLSSRWTDIMAFVPVLDFEHPA---PS------ 1276
            D IS LPDELLCHI+S+LP K A+ TS LS RW  + A VP+LDF+      PS      
Sbjct: 10   DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69

Query: 1275 ---LKFINIADKLLSNKRSANLQKLRLHVDKFDWSILVFCVNDWVRSAIDCNVVDLDVRV 1105
               + F N  D +L +   + ++K RL     +    +  V  W+  A++  V +LD+ +
Sbjct: 70   ERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNN----LDSVYSWICIALERRVQELDLHL 125

Query: 1104 PDFDSNIIENGEEFGLHIIASDTLQTLKVSGGLGLHMPSSTGCFKNLKTFEVK-LNDPDK 928
                  +I+   E         TL  +K+S  L L +P +T    +LK   +K +   D 
Sbjct: 126  ------LIDWRVELPPMFFICKTLVVVKLSCALFLDIP-TTVWLPSLKALHLKSVEYSDD 178

Query: 927  ELLEKLFCSLPQLEKLLFEGKFSKLMKMDMNICINIIVPALKQLSLKINQEDF------H 766
            + ++KL    P LE+L+ E +     + D    +N+  P+LK L +    + F       
Sbjct: 179  DSIQKLLSGCPVLEELVIERE-----ERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQE 233

Query: 765  NADFEVMIDAPVLENIFLEDEYLATYSIKHPTSLVKATLDVGRXXXXXXXXXXDA----- 601
            + D++V++DAP LE + + D     Y +K   SLVKA +DV +          +      
Sbjct: 234  DQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYH 293

Query: 600  -----RLFRVNEXXXXXXXXXXXXXLNGAAAALNWCAEGVPLLHELTHXXXXXXXXXXXX 436
                  L R++              L+G           +P  H +T             
Sbjct: 294  GPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYK-----LPTFHNMTRLEFLFIGGFNWD 348

Query: 435  XLPVFFASAPNLKTAVITV--QKQFNNXXXXXXXXXXXTRVSHLEEFEIRRAKLIRDKLN 262
             LP F  S+PNL+  VI      +                V HL+E EIRR  ++ +   
Sbjct: 349  FLPNFLHSSPNLEALVIETGYTNELIPEGWLMPLQVPACLVLHLKEIEIRR--IVGEDYE 406

Query: 261  LKEMVRYIVMNAEVLKKLTVD 199
            L E V Y++ NAEVL+++T+D
Sbjct: 407  L-EAVEYLLKNAEVLQQMTID 426


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 97.8 bits (242), Expect = 8e-18
 Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 19/281 (6%)
 Frame = -1

Query: 1428 DRISTLPDELLCHIISYLPLKDAIRTSTLSSRWTDIMAFVPVLDFEHPA---PS------ 1276
            D IS LPDELLCHI+S+LP K A+ TS LS RW  + A VP+LDF+      PS      
Sbjct: 10   DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69

Query: 1275 ---LKFINIADKLLSNKRSANLQKLRLHVDKFDWSILVFCVNDWVRSAIDCNVVDLDVRV 1105
               + F N  D +L +   + ++K RL                                 
Sbjct: 70   ERIIMFQNFVDGVLRHSEVSCIKKFRLGYR------------------------------ 99

Query: 1104 PDFDSNIIENGEEFGLHIIASDTLQTLKVSGGLGLHMPSSTGCFKNLKTFEVK-LNDPDK 928
               D+N+   G E         TL  +K+S  L L +P +T    +LK   +K +   D 
Sbjct: 100  ---DNNLDNWGVELPPMFFICKTLVVVKLSCALFLDIP-TTVWLPSLKALHLKSVEYSDD 155

Query: 927  ELLEKLFCSLPQLEKLLFEGKFSKLMKMDMNICINIIVPALKQLSLKINQEDF------H 766
            + ++KL    P LE+L+ E +     + D    +N+  P+LK L +    + F       
Sbjct: 156  DSIQKLLSGCPVLEELVIERE-----ERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQE 210

Query: 765  NADFEVMIDAPVLENIFLEDEYLATYSIKHPTSLVKATLDV 643
            + D++V++DAP LE + + D     Y +K   SLVKA +DV
Sbjct: 211  DQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDV 251


>ref|NP_198999.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75262537|sp|Q9FJ30.1|FBL88_ARATH RecName:
            Full=Putative F-box/LRR-repeat protein At5g41840
            gi|10177368|dbj|BAB10659.1| unnamed protein product
            [Arabidopsis thaliana] gi|332007352|gb|AED94735.1|
            putative F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 540

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 94/378 (24%), Positives = 148/378 (39%), Gaps = 31/378 (8%)
 Frame = -1

Query: 1428 DRISTLPDELLCHIISYLPLKDAIRTSTLSSRWTDIMAFVPVLDFE-----HPAPSL--- 1273
            DRIS LPD L+CHI+S+LP K+A  T+ L+ RW  ++AFVP L+F+     HP       
Sbjct: 14   DRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARRNKY 73

Query: 1272 -----KFINIADKLLSNKRSANLQKLRLHVDKFDWSILVFCVNDWVRSAIDCNVVDLDVR 1108
                  F++  D +L+ +        R HV K +  +    V +W+   +   V+D+D+ 
Sbjct: 74   SKSYESFMSFVDSVLALQAKTKTPLKRFHV-KCEDVVDQSWVLEWIPKVLKRGVLDIDLH 132

Query: 1107 VPDFDSNIIENGEEFGL--HIIASDTLQTLKVSGGLGLHMPSSTG-CFKNLKTFEVKLND 937
            +     N  EN   + L   I  S TL  LK+    G+H+    G     LKT  +    
Sbjct: 133  ITS-SRNYCENSSFYSLPSKIFVSKTLVRLKIQFQDGVHIDVEGGVSLPKLKTLHLDYFK 191

Query: 936  PDKELLEKLFCSLPQLEKLLFEGKFSKLMKMDMNICINIIVPALKQLSLKINQEDFHNAD 757
             +  +L KL      LE+L+           D    +++ +P LK+L+     EDF+  +
Sbjct: 192  IETSMLNKLLSGCHALEELVLANLMWADSSEDEACHVSVSIPTLKRLNF-CRSEDFYEGE 250

Query: 756  F---------------EVMIDAPVLENIFLEDEYLATYSIKHPTSLVKATLDVGRXXXXX 622
            F                +  D P L  +   D  +  Y      SLV+A L + +     
Sbjct: 251  FHFYEDYDEENINEGVSLSFDNPNLVYLEYSDVIVDKYKQVSFDSLVEANLRLRKTPDQD 310

Query: 621  XXXXXDARLFRVNEXXXXXXXXXXXXXLNGAAAALNWCAEGVPLLHELTHXXXXXXXXXX 442
                       V +              +     L+ C E +P+   L            
Sbjct: 311  ETDK-----VNVTKLLMGIHNVKILYLSDDTLEVLSCCRERIPVFDNLLELTIKTTPYVG 365

Query: 441  XXXLPVFFASAPNLKTAV 388
               LP    S P+L+T V
Sbjct: 366  WKSLPPLLKSCPSLETLV 383


>ref|NP_197662.2| F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
            gi|143015960|sp|Q9FNJ1.2|FDL47_ARATH RecName:
            Full=F-box/FBD/LRR-repeat protein At5g22700
            gi|332005682|gb|AED93065.1| F-box/FBD/LRR-repeat protein
            [Arabidopsis thaliana]
          Length = 437

 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 114/435 (26%), Positives = 184/435 (42%), Gaps = 23/435 (5%)
 Frame = -1

Query: 1428 DRISTLPDELLCHIISYLPLKDAIRTSTLSSRWTDIMAFVPVLDFEHPA--PSLKFINIA 1255
            DRIS+LPDELLC I+S LP K+A+ TS LS+RW  I    PVLD +  A   +  F++ A
Sbjct: 6    DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDATTFVSFA 65

Query: 1254 DKLLSNKRSANLQKLRLHVDKFDWSILVFCVNDWVRSAIDCNVVDLDVRVPDFDSNIIEN 1075
             + L   + + L K +L V++ D  + +  +  W++ A++  +  L+V     D     +
Sbjct: 66   SRFLEFSKDSCLHKFKLSVERDD--VDMCTIMPWIQDAVNRRIQHLEV-----DCRFSFH 118

Query: 1074 GEEFGLHIIASDTLQTLKVSGGLGLHMPSSTGCFKNLKTFEVKLN-DPDKELLEKLFCSL 898
             E   L +  S+TL +L++   + LH         NLK   ++ N     E LE    S 
Sbjct: 119  FEAVYLTLYLSETLVSLRLH-FVTLHRYEFVS-LPNLKVMHLEENIYYCLETLENFISSC 176

Query: 897  PQLEKLLFEGKFSKLMKMDMNICINIIVPALKQLSLKINQEDFHNAD----FEVMIDAPV 730
            P LE L       +++ +     + +   +L  L L ++  +    D    ++V+IDAP 
Sbjct: 177  PVLEDL----TVVRIVDIITEKILRVRSRSLNSLKLVLDSSNGWFIDDIDEWKVIIDAPR 232

Query: 729  LENIFLEDEYLATYSIKHPTSLVKATLDVGRXXXXXXXXXXDARLFRVN---EXXXXXXX 559
            L  + L+D+  A++ I +  S  KA + V                F VN   +       
Sbjct: 233  LAYLSLKDDQSASFVISNLGSSAKADIKVS---------------FNVNDIWDLPVTFER 277

Query: 558  XXXXXXLNGAAAALNWCAEGVPLL---HELTH----------XXXXXXXXXXXXXLPVFF 418
                  L G ++  +    G  L+   H L H                       LP   
Sbjct: 278  SNVGKLLTGLSSIRDLTISGTTLMIICHYLKHEPMPQFCNMVRLNARFYDCDLEMLPCVL 337

Query: 417  ASAPNLKTAVITVQKQFNNXXXXXXXXXXXTRVSHLEEFEIRRAKLIRDKLNLKEMVRYI 238
             S PNLK+ V+ +                   +S LE  EI R++L R +  +K + RY 
Sbjct: 338  ESCPNLKSLVLGLLSSAETEQQSRVSSVPPCFLSSLEFVEI-RSRLCRKRYVMK-VARYF 395

Query: 237  VMNAEVLKKLTVDGK 193
              N+ +LKK    G+
Sbjct: 396  AKNSVMLKKFVYVGR 410


>dbj|BAB11676.1| unnamed protein product [Arabidopsis thaliana]
            gi|225898923|dbj|BAH30592.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 452

 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 114/435 (26%), Positives = 184/435 (42%), Gaps = 23/435 (5%)
 Frame = -1

Query: 1428 DRISTLPDELLCHIISYLPLKDAIRTSTLSSRWTDIMAFVPVLDFEHPA--PSLKFINIA 1255
            DRIS+LPDELLC I+S LP K+A+ TS LS+RW  I    PVLD +  A   +  F++ A
Sbjct: 21   DRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDATTFVSFA 80

Query: 1254 DKLLSNKRSANLQKLRLHVDKFDWSILVFCVNDWVRSAIDCNVVDLDVRVPDFDSNIIEN 1075
             + L   + + L K +L V++ D  + +  +  W++ A++  +  L+V     D     +
Sbjct: 81   SRFLEFSKDSCLHKFKLSVERDD--VDMCTIMPWIQDAVNRRIQHLEV-----DCRFSFH 133

Query: 1074 GEEFGLHIIASDTLQTLKVSGGLGLHMPSSTGCFKNLKTFEVKLN-DPDKELLEKLFCSL 898
             E   L +  S+TL +L++   + LH         NLK   ++ N     E LE    S 
Sbjct: 134  FEAVYLTLYLSETLVSLRLH-FVTLHRYEFVS-LPNLKVMHLEENIYYCLETLENFISSC 191

Query: 897  PQLEKLLFEGKFSKLMKMDMNICINIIVPALKQLSLKINQEDFHNAD----FEVMIDAPV 730
            P LE L       +++ +     + +   +L  L L ++  +    D    ++V+IDAP 
Sbjct: 192  PVLEDL----TVVRIVDIITEKILRVRSRSLNSLKLVLDSSNGWFIDDIDEWKVIIDAPR 247

Query: 729  LENIFLEDEYLATYSIKHPTSLVKATLDVGRXXXXXXXXXXDARLFRVN---EXXXXXXX 559
            L  + L+D+  A++ I +  S  KA + V                F VN   +       
Sbjct: 248  LAYLSLKDDQSASFVISNLGSSAKADIKVS---------------FNVNDIWDLPVTFER 292

Query: 558  XXXXXXLNGAAAALNWCAEGVPLL---HELTH----------XXXXXXXXXXXXXLPVFF 418
                  L G ++  +    G  L+   H L H                       LP   
Sbjct: 293  SNVGKLLTGLSSIRDLTISGTTLMIICHYLKHEPMPQFCNMVRLNARFYDCDLEMLPCVL 352

Query: 417  ASAPNLKTAVITVQKQFNNXXXXXXXXXXXTRVSHLEEFEIRRAKLIRDKLNLKEMVRYI 238
             S PNLK+ V+ +                   +S LE  EI R++L R +  +K + RY 
Sbjct: 353  ESCPNLKSLVLGLLSSAETEQQSRVSSVPPCFLSSLEFVEI-RSRLCRKRYVMK-VARYF 410

Query: 237  VMNAEVLKKLTVDGK 193
              N+ +LKK    G+
Sbjct: 411  AKNSVMLKKFVYVGR 425


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