BLASTX nr result

ID: Bupleurum21_contig00024543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024543
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320812.1| predicted protein [Populus trichocarpa] gi|2...    72   9e-11
ref|XP_002302596.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-09
ref|XP_002511891.1| hypothetical protein RCOM_1616170 [Ricinus c...    65   2e-08
ref|XP_002278446.1| PREDICTED: uncharacterized protein LOC100241...    62   1e-07

>ref|XP_002320812.1| predicted protein [Populus trichocarpa] gi|222861585|gb|EEE99127.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 68/250 (27%), Positives = 91/250 (36%), Gaps = 68/250 (27%)
 Frame = -3

Query: 729 QLEGDNSLLNNNGFGDLFGAVESVASL--------------------------------- 649
           Q EG++S   N   GD  GAVESVAS+                                 
Sbjct: 54  QFEGEDSFNGNGSLGDSVGAVESVASMMMEDIEEKGMMKMKVDHMVIVDDNYENEGNKRS 113

Query: 648 KLCVDYEEQEEEEAMKINYCSKTDENGNWVCGLEAKQGETFCEFH--------------- 514
           ++  DYEE + +   K+  C+KTD  G W C  + K G T C+ H               
Sbjct: 114 EMFGDYEEMKIDSEFKLKKCNKTDGKG-WHCKNDTKNGHTVCDHHHHLTSHKSSYSNINN 172

Query: 513 -LRSYIAPVIXXXXXXXXXXXTARAKKTKP----ESNPYEDVYYYSGSGPSWGKRR---- 361
            +    A                RAK  K      SNPYE  YYYSG GP WGKRR    
Sbjct: 173 NINGSAATKKPDKVASIIGARRGRAKSAKKGSSSSSNPYE-FYYYSGFGPLWGKRRGDKD 231

Query: 360 -----VARELSKKSGVVAILPQEGSEN------XXXXXXXXXXXXXXXXXXXXGKRGRKR 214
                 A+++   + + +++P     +                           KR RK 
Sbjct: 232 TVNKNEAKDVDNSTVIGSMIPNTTPSSSYSPIENNQGFDYVDEDDDDEEEDSGKKRMRKP 291

Query: 213 IKARSLKSLI 184
           +KARSLKSL+
Sbjct: 292 VKARSLKSLM 301


>ref|XP_002302596.1| predicted protein [Populus trichocarpa] gi|222844322|gb|EEE81869.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 70/254 (27%), Positives = 89/254 (35%), Gaps = 72/254 (28%)
 Frame = -3

Query: 729 QLEGDNSLLNNNGFGDLFGAVESVASL--------------------------------- 649
           Q EG++SL  N   GD  GAVESVAS+                                 
Sbjct: 53  QFEGEDSLNGNGSLGDSIGAVESVASMMMEDSEQKGMIKMKVDNMVIIDDNHDNEGNRRS 112

Query: 648 KLCVDYEEQEEEEAMKINYCSKTDENGNWVCGLEAKQGETFCEFHLR------------- 508
           ++  DYE  + +   ++  C+KTD  G W C  E + G   C+ H               
Sbjct: 113 EMLDDYEGMKIDSEFELKNCNKTDGKG-WHCKNETRNGLPMCDHHHHLTSLKSSSCNNGN 171

Query: 507 ---SYIAPVIXXXXXXXXXXXTARAKKTK----PESNPYEDVYYYSGSGPSWGKRRVARE 349
              S IA                RAK  K      SNPYE  YYYSG GP WGKRR  R+
Sbjct: 172 INGSAIATKKPDKGTCITGARRGRAKSAKKGSSSNSNPYE-FYYYSGFGPLWGKRRGDRD 230

Query: 348 LSKK-------SGVV------------AILPQEGSENXXXXXXXXXXXXXXXXXXXXGKR 226
              K       +G +            +  P E +                       KR
Sbjct: 231 AVNKNEDKDVDNGTIIDSMTQNTTPFSSSSPIENNRQFDYVEEEEEDDDDDKEEDSGKKR 290

Query: 225 GRKRIKARSLKSLI 184
            RK +KARSLKS +
Sbjct: 291 MRKPVKARSLKSFM 304


>ref|XP_002511891.1| hypothetical protein RCOM_1616170 [Ricinus communis]
           gi|223549071|gb|EEF50560.1| hypothetical protein
           RCOM_1616170 [Ricinus communis]
          Length = 311

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 74/261 (28%), Positives = 92/261 (35%), Gaps = 79/261 (30%)
 Frame = -3

Query: 729 QLEGDNSLLNNNGFGDLFGAVES--VASLK-----------------LCVDYEEQE---- 619
           Q EG++S   N    D  GAVES  VASL                  + VD +  E    
Sbjct: 52  QYEGEDSFSGNGSLADSIGAVESSSVASLMEYDPEDKAAIKIKVNNMVIVDDDNYEIRRI 111

Query: 618 -------EEEAMKIN---------YCSKTDENGNWVCGLEAKQGETFCEFHLRSYI---- 499
                   EE  + N         YC    +   W C  E K+G + C+ H+ S +    
Sbjct: 112 NQEKKTMSEEDCEFNHKLKKGEKIYCCNKIDGKEWHCKNELKEGHSMCDHHILSSLKSSY 171

Query: 498 --------------APVIXXXXXXXXXXXTARAKKTKP----ESNPYEDVYYYSGSGPSW 373
                         +P I             R K  K      SNPYE  YYYSG GP W
Sbjct: 172 NNNVTSACIASPTNSPSIKKPEKAVAGTRRGRGKGAKKGQSSSSNPYE-FYYYSGFGPLW 230

Query: 372 GKRRVAR--------ELSKKSGVVAI----------LPQEGSENXXXXXXXXXXXXXXXX 247
           GKRR  R        + S+ SG +AI          LP E  +                 
Sbjct: 231 GKRRGDRGEGNKNESKESEISGAIAIHHNTTPFSAPLPIEDHQELDFVDEDDDDDEDSEG 290

Query: 246 XXXXGKRGRKRIKARSLKSLI 184
                KR RK +KARSLKSL+
Sbjct: 291 GDIGKKRMRKPVKARSLKSLM 311


>ref|XP_002278446.1| PREDICTED: uncharacterized protein LOC100241428 [Vitis vinifera]
           gi|297745355|emb|CBI40435.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 64/237 (27%), Positives = 91/237 (38%), Gaps = 55/237 (23%)
 Frame = -3

Query: 729 QLEGDNSLLNNNGFGDLFGAVESVASLKLCVDYEE----------------QEEEEAMK- 601
           + +GD+S   N   GD  GAVES + + +  D +                 +E++ A K 
Sbjct: 57  RFDGDDSFTANGSIGDSIGAVESRSLVPVVEDDDATNPNDRNPLSPDTRVVEEDKPAAKT 116

Query: 600 ------------INYCSKTDENGNWVCGLEAKQGETFCEFHL---RSYIAPVIXXXXXXX 466
                       I +C+K+D  G W C   AK+G   CE HL   RSY +          
Sbjct: 117 KPDEIASTKNKTILFCNKSDGKG-WQCRKAAKEGHALCEHHLAQLRSYNSSNQSSSRKLD 175

Query: 465 XXXXTARAKKT-----KPESNPYEDVYYYSGSGPSWGKRR-VARELSKKSGVVAILP--- 313
                   ++      KP SNP E  YYYSG GP WGK+R  ++  S ++ +    P   
Sbjct: 176 KPADRPSVRRRGRGLKKPPSNPNE-YYYYSGFGPLWGKKRGGSKPESNRNELKTESPPSY 234

Query: 312 --------------QEGSENXXXXXXXXXXXXXXXXXXXXGKRGRKRIKARSLKSLI 184
                         +E   +                     KR RK +KARSLKSL+
Sbjct: 235 SSQIDSPDDPDQKIEEEHHHDDDDEDDDDMVDEEENGESAKKRNRKPVKARSLKSLM 291


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