BLASTX nr result

ID: Bupleurum21_contig00024519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024519
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02810.1| unnamed protein product [Arabidopsis thaliana]         59   4e-07
ref|XP_002885364.1| extracellular ligand-gated ion channel [Arab...    59   4e-07
dbj|BAD95208.1| hypothetical protein [Arabidopsis thaliana]            59   4e-07
ref|NP_566658.1| uncharacterized protein [Arabidopsis thaliana] ...    59   4e-07
ref|XP_004151004.1| PREDICTED: uncharacterized protein LOC101212...    59   5e-07

>dbj|BAB02810.1| unnamed protein product [Arabidopsis thaliana]
          Length = 430

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -3

Query: 279 FGWMLDRTTLHTIFGFELSLVLWLLGKTVGIS 184
           FG+ LDR+TLHTIFG E+SLVLWLLGKT+GIS
Sbjct: 399 FGFTLDRSTLHTIFGIEMSLVLWLLGKTIGIS 430


>ref|XP_002885364.1| extracellular ligand-gated ion channel [Arabidopsis lyrata subsp.
           lyrata] gi|297331204|gb|EFH61623.1| extracellular
           ligand-gated ion channel [Arabidopsis lyrata subsp.
           lyrata]
          Length = 451

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -3

Query: 279 FGWMLDRTTLHTIFGFELSLVLWLLGKTVGIS 184
           FG+ LDR+TLHTIFG E+SLVLWLLGKT+GIS
Sbjct: 420 FGFTLDRSTLHTIFGIEMSLVLWLLGKTIGIS 451


>dbj|BAD95208.1| hypothetical protein [Arabidopsis thaliana]
          Length = 148

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -3

Query: 279 FGWMLDRTTLHTIFGFELSLVLWLLGKTVGIS 184
           FG+ LDR+TLHTIFG E+SLVLWLLGKT+GIS
Sbjct: 117 FGFTLDRSTLHTIFGIEMSLVLWLLGKTIGIS 148


>ref|NP_566658.1| uncharacterized protein [Arabidopsis thaliana]
           gi|18377809|gb|AAL67091.1| AT3g20300/MQC12_5
           [Arabidopsis thaliana] gi|21537221|gb|AAM61562.1|
           unknown [Arabidopsis thaliana]
           gi|22655008|gb|AAM98095.1| AT3g20300/MQC12_5
           [Arabidopsis thaliana] gi|332642840|gb|AEE76361.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 452

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -3

Query: 279 FGWMLDRTTLHTIFGFELSLVLWLLGKTVGIS 184
           FG+ LDR+TLHTIFG E+SLVLWLLGKT+GIS
Sbjct: 421 FGFTLDRSTLHTIFGIEMSLVLWLLGKTIGIS 452


>ref|XP_004151004.1| PREDICTED: uncharacterized protein LOC101212672 [Cucumis sativus]
           gi|449482633|ref|XP_004156355.1| PREDICTED:
           uncharacterized protein LOC101230635 [Cucumis sativus]
          Length = 434

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 279 FGWMLDRTTLHTIFGFELSLVLWLLGKTVGIS 184
           +G+ LDRTTLHTIFG ELSLVLWLLGKT+G S
Sbjct: 403 YGFTLDRTTLHTIFGIELSLVLWLLGKTIGFS 434


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