BLASTX nr result

ID: Bupleurum21_contig00024518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024518
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277314.1| PREDICTED: uncharacterized protein LOC100245...   465   e-128
ref|XP_002298818.1| predicted protein [Populus trichocarpa] gi|2...   463   e-128
emb|CAN83979.1| hypothetical protein VITISV_007068 [Vitis vinifera]   461   e-127
ref|XP_002885364.1| extracellular ligand-gated ion channel [Arab...   460   e-127
ref|NP_566658.1| uncharacterized protein [Arabidopsis thaliana] ...   458   e-127

>ref|XP_002277314.1| PREDICTED: uncharacterized protein LOC100245205 [Vitis vinifera]
          Length = 435

 Score =  465 bits (1196), Expect = e-128
 Identities = 237/373 (63%), Positives = 284/373 (76%), Gaps = 2/373 (0%)
 Frame = +1

Query: 1    DQSTGWTTFVSWLMYIIFAIVIPCLSYFGLACSDCDSRHSRPFDKLVQLSLSSVATLSFL 180
            DQST  T  +SW ++I+ AI +P +S+F LACS CD++H RP+D +VQLSLSSVA LSFL
Sbjct: 38   DQSTISTGCLSWSVFILLAIAVPVMSHFLLACSSCDAKHQRPYDAVVQLSLSSVAVLSFL 97

Query: 181  CLSRFVSRYGLRRFLFFDRLCDESQMVRQGYTEQLNRSLKILFYFVLPCFAAESAYKIWW 360
            CLSRF+  YGLRRFLFFD+L DES+MVR+ YTEQLNRS+KIL  FVLPCFAAE+ YKIWW
Sbjct: 98   CLSRFIRNYGLRRFLFFDKLRDESEMVRKNYTEQLNRSMKILSLFVLPCFAAEATYKIWW 157

Query: 361  YSSGGTRIPFLGNVILSDFVACTLELLSWLYRTXXXXXXXXXXXXICYLQILRLQDFAQI 540
            YSSG +RIPFLGNV +SD +ACTLEL SWLYRT            IC+LQILRLQDFA++
Sbjct: 158  YSSGRSRIPFLGNVYVSDVIACTLELCSWLYRTSVFFLVCVLFRLICHLQILRLQDFARV 217

Query: 541  FHTDSDVETVXXXXXXXXXXXXXXXXXXXAFILSALFGITISQFASLLMTTRSTADLNIF 720
            F  +SDVE+V                    FIL AL  +T SQFASLL TTRS AD+N+F
Sbjct: 218  FQAESDVESVLKEHLRIRRHLRIISHRNRVFILFALMFVTASQFASLLSTTRSRADVNMF 277

Query: 721  KSGELALCSMSLLAGLMIILRSATRITHKAQAVTSLAAKWHVCATIDSFDSVEADATPLA 900
             +GELALCS++L+ GLM++ RSAT+ITHKAQA+T LAAKWHVCATIDSF+S E + +P  
Sbjct: 278  TAGELALCSITLVTGLMVLFRSATKITHKAQAITCLAAKWHVCATIDSFESNEPE-SPRI 336

Query: 901  QVGQYQSFPGVTG--NDTLSDAEDVGDEEDELDNTKLLPAYAYSTISFQKRQALVAYFEN 1074
            Q+   + FP      ND  SD ED GDEED++D+TKL+PAYA STISFQKRQALV YFEN
Sbjct: 337  QIPCPRPFPSRASNENDVESDGEDAGDEEDDVDSTKLIPAYASSTISFQKRQALVVYFEN 396

Query: 1075 NRAGITVFGWMLD 1113
            NRAGITV+G+MLD
Sbjct: 397  NRAGITVYGFMLD 409


>ref|XP_002298818.1| predicted protein [Populus trichocarpa] gi|222846076|gb|EEE83623.1|
            predicted protein [Populus trichocarpa]
          Length = 433

 Score =  463 bits (1191), Expect = e-128
 Identities = 233/371 (62%), Positives = 286/371 (77%)
 Frame = +1

Query: 1    DQSTGWTTFVSWLMYIIFAIVIPCLSYFGLACSDCDSRHSRPFDKLVQLSLSSVATLSFL 180
            DQS+  T  +SW M+++F +V+P  S+F LACS CDSRH RP+D +VQLSLSSVATLSF+
Sbjct: 41   DQSSMGTACLSWTMFVLFGLVVPATSHFVLACSSCDSRHGRPYDSVVQLSLSSVATLSFV 100

Query: 181  CLSRFVSRYGLRRFLFFDRLCDESQMVRQGYTEQLNRSLKILFYFVLPCFAAESAYKIWW 360
            CLSRFV +YGLRRFLFFD+L DES+ VR+GYT QLN SLK+L  FV+PCF AE AYKIWW
Sbjct: 101  CLSRFVRKYGLRRFLFFDKLWDESETVRRGYTNQLNSSLKLLLIFVIPCFVAECAYKIWW 160

Query: 361  YSSGGTRIPFLGNVILSDFVACTLELLSWLYRTXXXXXXXXXXXXICYLQILRLQDFAQI 540
            Y+SG ++IPFLGNV+LSD VAC +EL SWLYRT            IC+LQILRLQDFA++
Sbjct: 161  YASGASQIPFLGNVVLSDTVACIMELCSWLYRTIVIFLVCVLFHLICHLQILRLQDFARV 220

Query: 541  FHTDSDVETVXXXXXXXXXXXXXXXXXXXAFILSALFGITISQFASLLMTTRSTADLNIF 720
            F  DSDV +V                    F+L +L  IT SQF+SLL+TT++ A ++I+
Sbjct: 221  FQVDSDVGSVLSEHFRIRRHLRIISHRYRGFVLCSLILITGSQFSSLLITTKAHAVVDIY 280

Query: 721  KSGELALCSMSLLAGLMIILRSATRITHKAQAVTSLAAKWHVCATIDSFDSVEADATPLA 900
            ++GELALCS++L+ GL+IILRSAT+ITHKAQAVTSLAAKWH+CAT+D+FD+ E + TP  
Sbjct: 281  RAGELALCSITLVTGLLIILRSATKITHKAQAVTSLAAKWHICATLDTFDATEGE-TPRH 339

Query: 901  QVGQYQSFPGVTGNDTLSDAEDVGDEEDELDNTKLLPAYAYSTISFQKRQALVAYFENNR 1080
              GQ   FP V G D  SD +D GDEEDELDN+KL+PAYAYSTISFQKRQALV YFENNR
Sbjct: 340  DSGQV--FP-VVGTDGESDGDDAGDEEDELDNSKLIPAYAYSTISFQKRQALVTYFENNR 396

Query: 1081 AGITVFGWMLD 1113
            AGITV+G++LD
Sbjct: 397  AGITVYGFILD 407


>emb|CAN83979.1| hypothetical protein VITISV_007068 [Vitis vinifera]
          Length = 435

 Score =  461 bits (1187), Expect = e-127
 Identities = 235/373 (63%), Positives = 282/373 (75%), Gaps = 2/373 (0%)
 Frame = +1

Query: 1    DQSTGWTTFVSWLMYIIFAIVIPCLSYFGLACSDCDSRHSRPFDKLVQLSLSSVATLSFL 180
            DQST  T  +SW ++I+ AI +P +S+F LACS CD++H RP+D +VQLSLSSVA LSFL
Sbjct: 38   DQSTISTGCLSWSVFILLAIAVPVMSHFLLACSSCDAKHQRPYDAVVQLSLSSVAVLSFL 97

Query: 181  CLSRFVSRYGLRRFLFFDRLCDESQMVRQGYTEQLNRSLKILFYFVLPCFAAESAYKIWW 360
            CLSRF+  YGLRRFLFFD+L DES+MVR  YTEQLNRS+KIL  FVLPCFAAE+ YKIWW
Sbjct: 98   CLSRFIRNYGLRRFLFFDKLRDESEMVRXNYTEQLNRSMKILSLFVLPCFAAEATYKIWW 157

Query: 361  YSSGGTRIPFLGNVILSDFVACTLELLSWLYRTXXXXXXXXXXXXICYLQILRLQDFAQI 540
            YSSG +RIPFLGNV +SD +ACTLEL SWLYRT            IC+LQILRLQDFA++
Sbjct: 158  YSSGRSRIPFLGNVYVSDVIACTLELCSWLYRTSVFFLVCVLFRLICHLQILRLQDFARV 217

Query: 541  FHTDSDVETVXXXXXXXXXXXXXXXXXXXAFILSALFGITISQFASLLMTTRSTADLNIF 720
            F  +SDVE+V                    FIL AL  +T SQFASLL TTRS AD+N+F
Sbjct: 218  FQAESDVESVLREHLRIRRHLRIISHRNRVFILFALMFVTASQFASLLSTTRSRADVNMF 277

Query: 721  KSGELALCSMSLLAGLMIILRSATRITHKAQAVTSLAAKWHVCATIDSFDSVEADATPLA 900
             +GELALCS++L+ GL+++ R AT+ITHKAQA+T LAAKWHVCATIDSF+S E + +P  
Sbjct: 278  TAGELALCSITLVTGLLVLFRGATKITHKAQAITCLAAKWHVCATIDSFESNEPE-SPRI 336

Query: 901  QVGQYQSFPGVTG--NDTLSDAEDVGDEEDELDNTKLLPAYAYSTISFQKRQALVAYFEN 1074
            Q+   + FP      ND  SD ED GDEED++D+TKL+PAYA STISFQKRQALV YFEN
Sbjct: 337  QIPCPRPFPSRASNENDVESDGEDAGDEEDDVDSTKLIPAYASSTISFQKRQALVVYFEN 396

Query: 1075 NRAGITVFGWMLD 1113
            NRAGITV+G+MLD
Sbjct: 397  NRAGITVYGFMLD 409


>ref|XP_002885364.1| extracellular ligand-gated ion channel [Arabidopsis lyrata subsp.
            lyrata] gi|297331204|gb|EFH61623.1| extracellular
            ligand-gated ion channel [Arabidopsis lyrata subsp.
            lyrata]
          Length = 451

 Score =  460 bits (1183), Expect = e-127
 Identities = 228/371 (61%), Positives = 279/371 (75%)
 Frame = +1

Query: 1    DQSTGWTTFVSWLMYIIFAIVIPCLSYFGLACSDCDSRHSRPFDKLVQLSLSSVATLSFL 180
            DQS+ WT  +SW M+++F +V+P  S+F LAC+DCDS HSRP+D +VQLSLSS A LSFL
Sbjct: 55   DQSSPWTAVLSWSMFVVFTLVVPATSHFMLACADCDSHHSRPYDSVVQLSLSSFAALSFL 114

Query: 181  CLSRFVSRYGLRRFLFFDRLCDESQMVRQGYTEQLNRSLKILFYFVLPCFAAESAYKIWW 360
            CLSRFVS+YGLRRFLFFD+L DES+ VR+GYT QLNRSLKIL YFV PCF A S+YKIWW
Sbjct: 115  CLSRFVSKYGLRRFLFFDKLWDESETVRRGYTNQLNRSLKILSYFVTPCFLAMSSYKIWW 174

Query: 361  YSSGGTRIPFLGNVILSDFVACTLELLSWLYRTXXXXXXXXXXXXICYLQILRLQDFAQI 540
            Y+SG ++IPFLGNVILSD VAC +EL SWLYRT            IC+LQILRLQDFAQ+
Sbjct: 175  YASGASQIPFLGNVILSDTVACLMELCSWLYRTTVIFLVCVLFRLICHLQILRLQDFAQV 234

Query: 541  FHTDSDVETVXXXXXXXXXXXXXXXXXXXAFILSALFGITISQFASLLMTTRSTADLNIF 720
            F  DSDV ++                    FIL +L  +T SQF SLL+TT++ A+LNI+
Sbjct: 235  FQMDSDVGSILSEHLRIRRHLRIISHRYRTFILLSLILVTGSQFYSLLITTKAYAELNIY 294

Query: 721  KSGELALCSMSLLAGLMIILRSATRITHKAQAVTSLAAKWHVCATIDSFDSVEADATPLA 900
            ++GELALCSM+L+  L+I+LRSA++ITHKAQAVT LAAKWHVCATI+SF++V+ +   L 
Sbjct: 295  RAGELALCSMTLVTALLILLRSASKITHKAQAVTCLAAKWHVCATIESFETVDGETPRLV 354

Query: 901  QVGQYQSFPGVTGNDTLSDAEDVGDEEDELDNTKLLPAYAYSTISFQKRQALVAYFENNR 1080
                   +     ++  SD+ED GDEED+ DN  L+PAYAYSTISFQKRQALV YFENNR
Sbjct: 355  DRASGHGYYPTDDDNGESDSEDYGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNR 414

Query: 1081 AGITVFGWMLD 1113
            AGITVFG+ LD
Sbjct: 415  AGITVFGFTLD 425


>ref|NP_566658.1| uncharacterized protein [Arabidopsis thaliana]
            gi|18377809|gb|AAL67091.1| AT3g20300/MQC12_5 [Arabidopsis
            thaliana] gi|21537221|gb|AAM61562.1| unknown [Arabidopsis
            thaliana] gi|22655008|gb|AAM98095.1| AT3g20300/MQC12_5
            [Arabidopsis thaliana] gi|332642840|gb|AEE76361.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 452

 Score =  458 bits (1179), Expect = e-127
 Identities = 228/371 (61%), Positives = 278/371 (74%)
 Frame = +1

Query: 1    DQSTGWTTFVSWLMYIIFAIVIPCLSYFGLACSDCDSRHSRPFDKLVQLSLSSVATLSFL 180
            DQS+ WT  +SW M+++F +V+P  S+F LACSDCDS HSRP+D +VQLSLSS A LSFL
Sbjct: 56   DQSSPWTAVLSWSMFVVFTLVVPATSHFMLACSDCDSHHSRPYDSVVQLSLSSFAALSFL 115

Query: 181  CLSRFVSRYGLRRFLFFDRLCDESQMVRQGYTEQLNRSLKILFYFVLPCFAAESAYKIWW 360
            CLSRFVS+YGLRRFLFFD+L DES+ VR GYT QLNRSLKIL YFV PCF A S+YKIWW
Sbjct: 116  CLSRFVSKYGLRRFLFFDKLWDESETVRLGYTNQLNRSLKILSYFVSPCFLAMSSYKIWW 175

Query: 361  YSSGGTRIPFLGNVILSDFVACTLELLSWLYRTXXXXXXXXXXXXICYLQILRLQDFAQI 540
            Y+SG ++IPFLGNVILSD VAC +EL SWLYRT            IC+LQILRLQDFAQ+
Sbjct: 176  YASGASQIPFLGNVILSDTVACLMELCSWLYRTTVIFLVCVLFRLICHLQILRLQDFAQV 235

Query: 541  FHTDSDVETVXXXXXXXXXXXXXXXXXXXAFILSALFGITISQFASLLMTTRSTADLNIF 720
            F  DSDV ++                    FIL +L  +T SQF SLL+TT++ A+LNI+
Sbjct: 236  FQMDSDVGSILSEHLRIRRHLRIISHRYRTFILLSLILVTGSQFYSLLITTKAYAELNIY 295

Query: 721  KSGELALCSMSLLAGLMIILRSATRITHKAQAVTSLAAKWHVCATIDSFDSVEADATPLA 900
            ++GELALCSM+L+  L+I+LRSA++ITHKAQAVT LAAKWHVCATI+SF++V+ +   L 
Sbjct: 296  RAGELALCSMTLVTALLILLRSASKITHKAQAVTCLAAKWHVCATIESFETVDGETPRLV 355

Query: 901  QVGQYQSFPGVTGNDTLSDAEDVGDEEDELDNTKLLPAYAYSTISFQKRQALVAYFENNR 1080
                   +     ++  SD+ED GDEED+ DN  L+PAYAYSTISFQKRQALV YFENNR
Sbjct: 356  DRASGHGYYPTDDDNGESDSEDYGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNR 415

Query: 1081 AGITVFGWMLD 1113
            +GITVFG+ LD
Sbjct: 416  SGITVFGFTLD 426


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