BLASTX nr result

ID: Bupleurum21_contig00024415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024415
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569246.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-lik...   288   4e-76
gb|AAS67855.2| root hair defective 3 GTP-binding protein [Tritic...   285   4e-75
ref|XP_004145461.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   285   5e-75
ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   285   6e-75
ref|XP_002455827.1| hypothetical protein SORBIDRAFT_03g025850 [S...   284   1e-74

>ref|XP_003569246.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Brachypodium
           distachyon]
          Length = 806

 Score =  288 bits (738), Expect = 4e-76
 Identities = 140/166 (84%), Positives = 151/166 (90%)
 Frame = -3

Query: 498 MEKGSYATQLIDGDGNFNEEGVNSFVKNIKLADCGLSYAVVAIMGPQSSGKSTLLNHLFH 319
           ME    +TQLIDGDG FN  G+ +F+K +KLADCGLSYAVV+IMGPQSSGKSTLLNHLF 
Sbjct: 1   MEDACLSTQLIDGDGVFNVSGLENFMKEVKLADCGLSYAVVSIMGPQSSGKSTLLNHLFR 60

Query: 318 TNFREMDAYRGRFQTTKGIWIAKAVGIDPCTLVMDLEGTDGRERGEDDTTFEKQSALFAL 139
           TNFREMDA+RGR QTTKGIW+AKA  I+PCTLVMDLEGTDGRERGEDDT FEKQSALFAL
Sbjct: 61  TNFREMDAFRGRSQTTKGIWMAKAQNIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFAL 120

Query: 138 AVSDIVLVNMWCHDIGREHAANKPLLKTVFQVMMRLFSPRKTTLLF 1
           AVSDIVL+NMWCHDIGRE AANKPLLKTVFQVMMRLFSPRKTT+LF
Sbjct: 121 AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLF 166


>gb|AAS67855.2| root hair defective 3 GTP-binding protein [Triticum aestivum]
          Length = 804

 Score =  285 bits (730), Expect = 4e-75
 Identities = 138/160 (86%), Positives = 149/160 (93%)
 Frame = -3

Query: 480 ATQLIDGDGNFNEEGVNSFVKNIKLADCGLSYAVVAIMGPQSSGKSTLLNHLFHTNFREM 301
           +TQLIDGDG FN  G+ SF+K +KLA+CGLSYAVV+IMGPQSSGKSTLLNHLF TNFREM
Sbjct: 6   STQLIDGDGVFNVSGLESFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHLFRTNFREM 65

Query: 300 DAYRGRFQTTKGIWIAKAVGIDPCTLVMDLEGTDGRERGEDDTTFEKQSALFALAVSDIV 121
           DA+RGR QTTKGIW+AKA  I+PCTLVMDLEGTDGRERGEDDT FEKQSALFALAVSDIV
Sbjct: 66  DAFRGRSQTTKGIWMAKAQNIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIV 125

Query: 120 LVNMWCHDIGREHAANKPLLKTVFQVMMRLFSPRKTTLLF 1
           L+NMWCHDIGRE AANKPLLKTVFQVMMRLFSPRKTT+LF
Sbjct: 126 LINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLF 165


>ref|XP_004145461.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Cucumis
           sativus] gi|449513053|ref|XP_004164215.1| PREDICTED:
           protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Cucumis
           sativus]
          Length = 809

 Score =  285 bits (729), Expect = 5e-75
 Identities = 133/161 (82%), Positives = 149/161 (92%)
 Frame = -3

Query: 483 YATQLIDGDGNFNEEGVNSFVKNIKLADCGLSYAVVAIMGPQSSGKSTLLNHLFHTNFRE 304
           + TQLID +G+FN  G+  F++ IKLA+CGLSYAVV+IMGPQSSGKSTLLNHLFHTNFRE
Sbjct: 7   FTTQLIDANGDFNAAGLEDFIRKIKLAECGLSYAVVSIMGPQSSGKSTLLNHLFHTNFRE 66

Query: 303 MDAYRGRFQTTKGIWIAKAVGIDPCTLVMDLEGTDGRERGEDDTTFEKQSALFALAVSDI 124
           MDAY+GR QTTKGIW+AK V  +PCT+ MDLEGTDGRERGEDDTTFEKQSALFALAVSDI
Sbjct: 67  MDAYKGRVQTTKGIWVAKCVATEPCTIAMDLEGTDGRERGEDDTTFEKQSALFALAVSDI 126

Query: 123 VLVNMWCHDIGREHAANKPLLKTVFQVMMRLFSPRKTTLLF 1
           VL+N+WCHDIGREHAAN+PLLKTVF+VMMRLFSPRKTTLLF
Sbjct: 127 VLINIWCHDIGREHAANRPLLKTVFEVMMRLFSPRKTTLLF 167


>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  285 bits (728), Expect = 6e-75
 Identities = 137/160 (85%), Positives = 149/160 (93%)
 Frame = -3

Query: 480 ATQLIDGDGNFNEEGVNSFVKNIKLADCGLSYAVVAIMGPQSSGKSTLLNHLFHTNFREM 301
           +TQLIDGDG FN  GV +F+K +KLA+CGLSYAVV+IMGPQSSGKSTLLNHLF TNFREM
Sbjct: 9   STQLIDGDGTFNVFGVENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREM 68

Query: 300 DAYRGRFQTTKGIWIAKAVGIDPCTLVMDLEGTDGRERGEDDTTFEKQSALFALAVSDIV 121
           DA++GR QTTKGIW+A+  GI+PCTLVMDLEGTDGRERGEDDT FEKQSALFALAVSDIV
Sbjct: 69  DAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIV 128

Query: 120 LVNMWCHDIGREHAANKPLLKTVFQVMMRLFSPRKTTLLF 1
           L+NMWCHDIGRE AANKPLLKTVFQVMMRLFSPRKTTLLF
Sbjct: 129 LINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLF 168


>ref|XP_002455827.1| hypothetical protein SORBIDRAFT_03g025850 [Sorghum bicolor]
           gi|241927802|gb|EES00947.1| hypothetical protein
           SORBIDRAFT_03g025850 [Sorghum bicolor]
          Length = 808

 Score =  284 bits (726), Expect = 1e-74
 Identities = 137/166 (82%), Positives = 151/166 (90%)
 Frame = -3

Query: 498 MEKGSYATQLIDGDGNFNEEGVNSFVKNIKLADCGLSYAVVAIMGPQSSGKSTLLNHLFH 319
           M    ++TQLIDGDG FN  G+ +F+K+++L +CGLSYAVV+IMGPQSSGKSTLLNHLF 
Sbjct: 1   MGDACFSTQLIDGDGVFNVSGLENFMKDVRLGECGLSYAVVSIMGPQSSGKSTLLNHLFG 60

Query: 318 TNFREMDAYRGRFQTTKGIWIAKAVGIDPCTLVMDLEGTDGRERGEDDTTFEKQSALFAL 139
           TNFREMDA+RGR QTTKGIW+AKA  I+PCTLVMDLEGTDGRERGEDDT FEKQSALFAL
Sbjct: 61  TNFREMDAFRGRSQTTKGIWLAKAQNIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFAL 120

Query: 138 AVSDIVLVNMWCHDIGREHAANKPLLKTVFQVMMRLFSPRKTTLLF 1
           AVSDIVL+NMWCHDIGRE AANKPLLKTVFQVMMRLFSPRKTTLLF
Sbjct: 121 AVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLF 166


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