BLASTX nr result

ID: Bupleurum21_contig00024080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024080
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ...   155   4e-36
ref|XP_003598094.1| Helicase-like protein [Medicago truncatula] ...   154   6e-36
gb|ABA95557.1| AT hook motif-containing protein, putative [Oryza...   152   3e-35
ref|XP_003606601.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   148   6e-34
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza...   147   7e-34

>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
            gi|355506578|gb|AES87720.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1585

 Score =  155 bits (392), Expect = 4e-36
 Identities = 79/174 (45%), Positives = 111/174 (63%)
 Frame = -3

Query: 536  FEAVDRSIRDLMRHKDASNLDKPFGGKTVLLGGDFRQILPVLPKKGREDIVMSSVNRSYL 357
            FEA+DRS+RD++R ++    D PFGGK V+LGGDFRQ+LPV+PK  R+++V +S+N SYL
Sbjct: 1221 FEALDRSLRDILRVQNNGRTDIPFGGKVVVLGGDFRQVLPVMPKANRQEVVNASINSSYL 1280

Query: 356  WSNCNVFKLDKNMRIELGVPEVTISGNKIPYADWVIGVGDGQVPTVASVEGDEPVWIEIP 177
            W  C V  L  NMR+  G     I+  K  +++WV+G+GDG V     V  DE + IEIP
Sbjct: 1281 WQFCEVLTLSTNMRLLHGSSSSDINERK-QFSEWVLGIGDGTV----GVANDEDIDIEIP 1335

Query: 176  KELSLDPKDDGKKVIIETIYSRLCDSSNASDYFRDRAILTPLNEDVDDINREVL 15
            ++L +    D    I+  IY  L D  +   +F+DRAILTP N  V++IN  V+
Sbjct: 1336 EDLLIRSSGDHIAAIVNEIYPSLLDEMHDPSFFQDRAILTPKNSTVEEINEYVM 1389


>ref|XP_003598094.1| Helicase-like protein [Medicago truncatula]
            gi|355487142|gb|AES68345.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1672

 Score =  154 bits (390), Expect = 6e-36
 Identities = 77/174 (44%), Positives = 113/174 (64%)
 Frame = -3

Query: 536  FEAVDRSIRDLMRHKDASNLDKPFGGKTVLLGGDFRQILPVLPKKGREDIVMSSVNRSYL 357
            FEA+DRS+RD++RH++   LD PFGGK V+LGGDFRQ+LPV+PK  R+++  +++N S L
Sbjct: 1308 FEALDRSMRDILRHQNGGRLDIPFGGKVVVLGGDFRQVLPVIPKANRQEVCNATINSSQL 1367

Query: 356  WSNCNVFKLDKNMRIELGVPEVTISGNKIPYADWVIGVGDGQVPTVASVEGDEPVWIEIP 177
            W +C V  L  NMR+  G     I   K  +++WV+G+GDG +      E DE + ++IP
Sbjct: 1368 WHSCEVLTLTTNMRLLHGSSPHDICERK-EFSEWVLGIGDGSI----GEENDEYINMQIP 1422

Query: 176  KELSLDPKDDGKKVIIETIYSRLCDSSNASDYFRDRAILTPLNEDVDDINREVL 15
             +L +    D    I++ IY  L D+ +  D+F+DRAILTP N  VD+IN  +L
Sbjct: 1423 HDLLIHSSRDHIASIVDCIYPSLLDNMHEKDFFQDRAILTPKNVSVDEINDYML 1476


>gb|ABA95557.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
           Group]
          Length = 561

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/176 (42%), Positives = 115/176 (65%)
 Frame = -3

Query: 536 FEAVDRSIRDLMRHKDASNLDKPFGGKTVLLGGDFRQILPVLPKKGREDIVMSSVNRSYL 357
           FEA+D+S+RD+MR  + ++ ++PFGG TV+LGGDFRQILPV+PK  RE+IV +S+ RSYL
Sbjct: 229 FEALDKSLRDIMRFTNENSSERPFGGMTVVLGGDFRQILPVIPKGRRENIVNASIKRSYL 288

Query: 356 WSNCNVFKLDKNMRIELGVPEVTISGNKIPYADWVIGVGDGQVPTVASVEGDEPVWIEIP 177
           W++  + KL +NMR+     E         +A W++ +GDG     AS EG+E  W++IP
Sbjct: 289 WNHFEIIKLTENMRLSCMSNEPLEKQKVAEFAKWILHIGDG---ASASDEGEE--WVKIP 343

Query: 176 KELSLDPKDDGKKVIIETIYSRLCDSSNASDYFRDRAILTPLNEDVDDINREVLKR 9
            ++ L    D K+ I+++IY  L D+    ++  +RAIL P NE V +IN  ++ +
Sbjct: 344 SDILLQKGQDPKETIVKSIYPNLLDNYREREFLEERAILCPRNETVQEINEYIMNQ 399


>ref|XP_003606601.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507656|gb|AES88798.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 729

 Score =  148 bits (373), Expect = 6e-34
 Identities = 74/173 (42%), Positives = 109/173 (63%)
 Frame = -3

Query: 533 EAVDRSIRDLMRHKDASNLDKPFGGKTVLLGGDFRQILPVLPKKGREDIVMSSVNRSYLW 354
           +A+DR++RD++RH++   LD PFGGK V+LGGDFRQ+LPV+PK  R DI+ +S+N S LW
Sbjct: 380 KALDRTLRDVLRHRNNGRLDIPFGGKVVVLGGDFRQVLPVIPKATRPDIIYASINSSPLW 439

Query: 353 SNCNVFKLDKNMRIELGVPEVTISGNKIPYADWVIGVGDGQVPTVASVEGDEPVWIEIPK 174
           ++C V  L   MR+  G         K  +++WV+ +GDG +      E DE + + IP+
Sbjct: 440 NHCEVLTLTTKMRLLHGCSSTDYQSKK-EFSEWVLAIGDGSI----GEENDEDIKVSIPE 494

Query: 173 ELSLDPKDDGKKVIIETIYSRLCDSSNASDYFRDRAILTPLNEDVDDINREVL 15
           +L +    D    I+E IY  L  + +  ++F+DRAILTP N  VD+IN  VL
Sbjct: 495 DLRIHCSSDPIAAIVECIYPSLLANMHDFEFFQDRAILTPKNVTVDEINAFVL 547


>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
            Group]
          Length = 1682

 Score =  147 bits (372), Expect = 7e-34
 Identities = 76/174 (43%), Positives = 107/174 (61%)
 Frame = -3

Query: 536  FEAVDRSIRDLMRHKDASNLDKPFGGKTVLLGGDFRQILPVLPKKGREDIVMSSVNRSYL 357
            FEA+DRS+RD++R K   N  KPFGG TV+LGGDFRQILPV+ K  R  IV +S+ RSYL
Sbjct: 1321 FEALDRSLRDILRSKGEDNSTKPFGGMTVVLGGDFRQILPVVRKGRRTQIVNASIKRSYL 1380

Query: 356  WSNCNVFKLDKNMRIELGVPEVTISGNKIPYADWVIGVGDGQVPTVASVEGDEPVWIEIP 177
            W + ++FKL +NMR+     +         +A W++ +GDG+     S +G+E  WIEIP
Sbjct: 1381 WQHFHIFKLTRNMRLSCISRDEDEQKRTADFAQWIVNIGDGK---TTSADGEE--WIEIP 1435

Query: 176  KELSLDPKDDGKKVIIETIYSRLCDSSNASDYFRDRAILTPLNEDVDDINREVL 15
             +L L    D K+ I+++IY  L  +    D+   RAIL P NE   +IN  ++
Sbjct: 1436 DDLILKKGGDPKEEIVKSIYPNLVQNYKKRDFLEQRAILCPRNETAREINEFIM 1489


Top