BLASTX nr result

ID: Bupleurum21_contig00023977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023977
         (1374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]   242   2e-61
gb|ACY01934.1| hypothetical protein [Beta vulgaris]                   230   7e-58
gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]    226   1e-56
emb|CAN69709.1| hypothetical protein VITISV_018584 [Vitis vinifera]   208   3e-51
ref|XP_003516673.1| PREDICTED: uncharacterized protein LOC100801...   193   1e-46

>emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]
          Length = 1048

 Score =  242 bits (617), Expect = 2e-61
 Identities = 123/255 (48%), Positives = 160/255 (62%), Gaps = 7/255 (2%)
 Frame = -1

Query: 960 EICDTFKCNNVTDDAIKLRLFPFSLRDKAKGWLHSLPSGSIKTWEDLAQKFLTKFFPMAK 781
           EI DTFK N VTDDAI+LRLFPFSL +KAK WL SLP G+I TW+ L   FL K+FP+AK
Sbjct: 17  EIRDTFKHNGVTDDAIRLRLFPFSLNNKAKAWLISLPPGTITTWDGLVNAFLAKYFPLAK 76

Query: 780 TAAMRNAITQFQQQSGESLCEAWERYKELIRKCPHHGIPDWMLINCFYNGLGVQSRPMID 601
           +  MRN IT F QQ  ESL EAWER+K+L+RKCPHHG+P WM    FYN L   ++ M+D
Sbjct: 77  STKMRNDITNFLQQDQESLYEAWERFKDLLRKCPHHGLPIWMQAQMFYNSLHPNTQTMVD 136

Query: 600 ASSGGALWAKSYDEAYELLETIAANEYQNPTQRMTQAKVAGVLEVDXXXXXXXXXXXLSM 421
           A+SGGA   K+ DE Y+L++ +A+N +   T R  Q +  GV ++D           L+ 
Sbjct: 137 AASGGAFINKTPDEGYQLIKVMASNNFLKSTDRNAQKRTVGVHDIDVFNNLATQVAILNN 196

Query: 420 KVDALANFGVPQVASICELCAGAHNTSQCAIS-------NESVQYVSNFQRQQPPASNFY 262
               L    V  +  +CE CAG H + +C +        ++ V YV+N QRQ  P SN++
Sbjct: 197 NFKKLNVVVVSNL--VCENCAGNHPSLECQVGGPYEANPSKQVNYVANNQRQYNPNSNYF 254

Query: 261 TPNNRNHPNFSWTNN 217
               RNHPNFSW+NN
Sbjct: 255 NQGWRNHPNFSWSNN 269


>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score =  230 bits (586), Expect = 7e-58
 Identities = 153/409 (37%), Positives = 212/409 (51%), Gaps = 26/409 (6%)
 Frame = -1

Query: 1152 MGDN--KALMEYSQPKIDAIKSSIVRPAIAANTFEIKPGTIQMVQNSVQFGGAPSEDPNQ 979
            MG+N  +   +Y+QP  D + + +  P IAA  FEIK   + MVQN+ QF G PSEDPNQ
Sbjct: 1    MGENVTRTFRDYAQPSPDNVPTGVPMPTIAATNFEIKSHVLNMVQNN-QFAGLPSEDPNQ 59

Query: 978  HIRDFIEICDTFKCNNVTDDAIKLRLFPFSLRDKAKGWLHSLPSGSIKTWEDLAQKFLTK 799
            H++ F++ C T K   VT D +KL LF FSLRDKA    + LPS +I TW +L + FL K
Sbjct: 60   HLQRFLQCCATQKQAGVTPDEMKLLLFGFSLRDKALFCYNKLPS-TITTWPELFKIFLIK 118

Query: 798  FFPMAKTAAMRNAITQFQQQSGESLCEAWERYKELIRKCPHHGIPDWMLINCFYNGLGVQ 619
            ++P  KTA MR+AI  F Q  GESL EAWER+K+L R CPHHG+  W L   FY  +   
Sbjct: 119  WYPYQKTADMRHAIVTFTQDPGESLYEAWERFKDLQRLCPHHGLDQWYLCQIFYTRVDAD 178

Query: 618  SRPMIDASSGGALWAKSYDEAYELLETIAANEYQNPTQRMTQAKVAGVLEVDXXXXXXXX 439
            +R +ID +SGG    K+ +E YELLE +A+N  Q  T R +  K  G  +V+        
Sbjct: 179  TRRVIDGASGGFFMDKAIEEGYELLEKLASN--QASTIR-SSLKKGGKHDVEAISLLSGQ 235

Query: 438  XXXLSMKVDAL------ANFGVPQVAS-------ICELCA-GAHNTSQCAISNESVQYVS 301
               L+ K+D+L      ++  V  +AS       +C+ C    HN+ +C     + + V+
Sbjct: 236  LATLTQKIDSLKLGNDSSHMSVNAMASASNYNVHVCDACGISGHNSQECPALGNNCEAVN 295

Query: 300  NFQRQQ----PPASNFYTPNNRNHPNFSW-TNNXXXXXXXXXXXXXXXXXQFGAKQYNPP 136
             FQ Q      P SN Y P  R HPN S+ + N                 Q+   Q  PP
Sbjct: 296  AFQSQPRNQFNPYSNTYNPGLRQHPNLSYRSTNVLNPQPQQPYPPQQQGQQYQPSQQAPP 355

Query: 135  GFK-----SQPQANVGQAVTGISELEEIKRKQQSTDIILADINKQLGQL 4
            GF+      QP      A+T +  +  + + Q+  +   AD   QL  L
Sbjct: 356  GFQRNPAPPQPAPPADPAMTELKNM--MFQMQKGFNAFQADTKAQLENL 402


>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score =  226 bits (575), Expect = 1e-56
 Identities = 117/249 (46%), Positives = 158/249 (63%), Gaps = 10/249 (4%)
 Frame = -1

Query: 936 NNVTDDAIKLRLFPFSLRDKAKGWLHSLPSGSIKTWEDLAQKFLTKFFPMAKTAAMRNAI 757
           N V+DDAIKLRLFPFSLRDKA+ WL SLP GSI TW+ L++ FL K+FP +KTA +RN I
Sbjct: 2   NGVSDDAIKLRLFPFSLRDKARAWLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQI 61

Query: 756 TQFQQQSGESLCEAWERYKELIRKCPHHGIPDWMLINCFYNGLGVQSRPMIDASSGGALW 577
           T F Q+ GESL +AWERYK+L+R CPHHG+ DW++I+ FYNGL   +R  +DA++GGAL 
Sbjct: 62  TTFTQKEGESLYDAWERYKDLLRMCPHHGLEDWLIIHTFYNGLLYNTRMTVDAAAGGALM 121

Query: 576 AKSYDEAYELLETIAANEYQNPTQRMTQAKVAGVLEVDXXXXXXXXXXXLSMKVDALANF 397
            KS  +A +L+E +A N +Q   +R +  K +G  +VD           L  K D ++  
Sbjct: 122 NKSVRDAKQLIEDMAQNHFQWSGER-SLPKKSGRYDVDALDHIASRVDALFQKFDKMSMN 180

Query: 396 GVPQVASICELCA-GAHNTSQCAISN---------ESVQYVSNFQRQQPPASNFYTPNNR 247
            V   ++ CE+C    H+  +C I N         E V Y++NF ++  P SN Y P  R
Sbjct: 181 SVASNSTNCEICGIIGHSAVECQIGNSPSPDAPLSEHVNYMNNFNQKGDPFSNTYNPGWR 240

Query: 246 NHPNFSWTN 220
           NHPN S+ N
Sbjct: 241 NHPNLSYKN 249


>emb|CAN69709.1| hypothetical protein VITISV_018584 [Vitis vinifera]
          Length = 363

 Score =  208 bits (529), Expect = 3e-51
 Identities = 123/284 (43%), Positives = 161/284 (56%), Gaps = 5/284 (1%)
 Frame = -1

Query: 1299 IQLRYCMTRLSSGDLFPVYPEIERQFREW---RKQQLKQ--PPFNTENFLANTEMGDNKA 1135
            ++ R CM R  S DL  +  +I +  R+    RKQQ+ Q  P    EN   N     N+A
Sbjct: 97   LKRRSCMRRTRSVDLVLIDLDINKTLRKLNQKRKQQVIQEVPAMRNENHGDNGV--PNRA 154

Query: 1134 LMEYSQPKIDAIKSSIVRPAIAANTFEIKPGTIQMVQNSVQFGGAPSEDPNQHIRDFIEI 955
            L +Y  P +    SSI RP I AN FEIK   IQM+Q+S+QFGG  ++DPN HI +F+EI
Sbjct: 155  LKDYFVPNVGV--SSIRRPPIQANNFEIKLAIIQMIQSSIQFGGLANDDPNLHIANFLEI 212

Query: 954  CDTFKCNNVTDDAIKLRLFPFSLRDKAKGWLHSLPSGSIKTWEDLAQKFLTKFFPMAKTA 775
              TFK N VTDDAI+LRLFPF L +KAK WL SLP G+I TW+ L               
Sbjct: 213  FYTFKHNGVTDDAIRLRLFPFPLNNKAKAWLISLPPGTITTWDGL--------------- 257

Query: 774  AMRNAITQFQQQSGESLCEAWERYKELIRKCPHHGIPDWMLINCFYNGLGVQSRPMIDAS 595
                       Q  ESL EA ER+K+L+RKC HHG+P WM +  FYN L   ++ M+DA 
Sbjct: 258  -----------QDQESLYEARERFKDLLRKCSHHGLPMWMQVQTFYNSLHXNTQTMVDAP 306

Query: 594  SGGALWAKSYDEAYELLETIAANEYQNPTQRMTQAKVAGVLEVD 463
            S G    K+ +E Y+L+E +A N +   T R  Q ++ GV + D
Sbjct: 307  SXGXFINKTPEEGYQLIEVMAXNNFLKSTDRNAQKRIVGVHDFD 350


>ref|XP_003516673.1| PREDICTED: uncharacterized protein LOC100801435 [Glycine max]
          Length = 1661

 Score =  193 bits (490), Expect = 1e-46
 Identities = 142/468 (30%), Positives = 215/468 (45%), Gaps = 43/468 (9%)
 Frame = -1

Query: 1275 RLSSGDLFPVYPEIE------RQFREWRKQQLK-----QPPFNTENFLANTEMGDNKALM 1129
            R +SGD+ P+  EIE         R  R+Q  +      PP +  +   + E      L 
Sbjct: 4    RTASGDVLPINLEIEATCRRNNAARRRREQDTEGSSHTSPPLSPHHTEMDGEQARRVTLE 63

Query: 1128 EYSQPKIDAIKSSIVRPAIAANTFEIKPGTIQMVQNSVQFGGAPSEDPNQHIRDFIEICD 949
            ++S        +SI RP + A         IQ++Q ++ F G PSEDP  H+  +IEIC+
Sbjct: 64   DFSNTATPQFFTSIARPEVQAANISYPHSLIQLIQGNL-FHGLPSEDPYAHLASYIEICN 122

Query: 948  TFKCNNVTDDAIKLRLFPFSLRDKAKGWLHSLPSGSIKTWEDLAQKFLTKFFPMAKTAAM 769
            T K   V +DA++L LF FSL  +AK WLHS    S++TWE++ +KFL K+FP +KTA  
Sbjct: 123  TVKIAGVPEDAVRLNLFSFSLAGEAKRWLHSFKGNSLRTWEEVVEKFLKKYFPESKTAEG 182

Query: 768  RNAITQFQQQSGESLCEAWERYKELIRKCPHHGIPDWMLINCFYNGLGVQSRPMIDASSG 589
            +  I+ F Q   ESL EA +R+  L+RK P HG  + + +N F +GL   S+ ++DAS+G
Sbjct: 183  KMEISSFHQFPDESLSEALDRFHGLLRKTPTHGYSEPVQLNIFIDGLRPHSKQLLDASAG 242

Query: 588  GALWAKSYDEAYELLETIAANEYQNPTQRMTQAKVAGVLEVDXXXXXXXXXXXLSMKVDA 409
            G +  K+ +EA EL+E +AA++      R        +LE+            L+ +++A
Sbjct: 243  GKIKLKTPEEAMELIENMAASDQAILRDRSYVPTKRSLLELGTQDATLAQNKLLTRQIEA 302

Query: 408  L----------------ANFGVPQVASICELCAGAHNTSQCAISNES---VQYVSNFQR- 289
            L                ++  V QV   C  C G H   QC    ++   V Y+    R 
Sbjct: 303  LTETLSKLPQQLQAVSSSHSSVLQVEG-CPTCGGTHEPGQCVSQQDTSREVNYMGVPNRG 361

Query: 288  ----QQPPASNFYTPN---NRNHPNFSWTNNXXXXXXXXXXXXXXXXXQFGAKQYNPPGF 130
                 Q  +S F+      N   P F+   N                 +   + Y PP  
Sbjct: 362  YQGYNQGNSSGFHQGGAGFNHGPPGFNQGRNFTQGSGWRNQGNQYKEQR-NQQPYQPPYQ 420

Query: 129  KSQPQANVGQAVTGISEL-----EEIKRKQQSTDIILADINKQLGQLA 1
                  N     T I EL     +E +  Q+STD  + ++  Q+GQLA
Sbjct: 421  HPSQGPNQQDKPTNIEELLLQFIQETRSHQKSTDAAIRNLEVQMGQLA 468


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