BLASTX nr result

ID: Bupleurum21_contig00023974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023974
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vin...   168   5e-40
emb|CBI27448.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glyc...   167   1e-39
emb|CAE03228.1| OSJNBa0018M05.3 [Oryza sativa Japonica Group] gi...   166   2e-39
ref|XP_002316140.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39

>ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vinifera]
          Length = 328

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/95 (82%), Positives = 87/95 (91%)
 Frame = +1

Query: 1   VRQHQANSHAKKGWEQYTDAVIETISKKKRGVVFLLWGNYAQVKSRLIDGTKHHILKAAH 180
           VR HQANSHAKKGWEQ+TD+VI TIS+K+RGVVFLLWGN AQ KSRLID TKHHILKAAH
Sbjct: 234 VRSHQANSHAKKGWEQFTDSVIRTISQKQRGVVFLLWGNSAQEKSRLIDDTKHHILKAAH 293

Query: 181 PSGLSASRGFFGCRHFSRTNQLLEEMGMSPIVWQL 285
           PSGLSA+RGFFGCRHFSRTN++LE+ G+ PI WQL
Sbjct: 294 PSGLSANRGFFGCRHFSRTNKILEQKGVPPIDWQL 328


>emb|CBI27448.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/95 (82%), Positives = 87/95 (91%)
 Frame = +1

Query: 1   VRQHQANSHAKKGWEQYTDAVIETISKKKRGVVFLLWGNYAQVKSRLIDGTKHHILKAAH 180
           VR HQANSHAKKGWEQ+TD+VI TIS+K+RGVVFLLWGN AQ KSRLID TKHHILKAAH
Sbjct: 227 VRSHQANSHAKKGWEQFTDSVIRTISQKQRGVVFLLWGNSAQEKSRLIDDTKHHILKAAH 286

Query: 181 PSGLSASRGFFGCRHFSRTNQLLEEMGMSPIVWQL 285
           PSGLSA+RGFFGCRHFSRTN++LE+ G+ PI WQL
Sbjct: 287 PSGLSANRGFFGCRHFSRTNKILEQKGVPPIDWQL 321


>ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glycine max]
          Length = 303

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/95 (81%), Positives = 86/95 (90%)
 Frame = +1

Query: 1   VRQHQANSHAKKGWEQYTDAVIETISKKKRGVVFLLWGNYAQVKSRLIDGTKHHILKAAH 180
           VR+HQANSHAKKGWEQ+TD VI+TIS+KK GVVFLLWGN A+ KSRLID  KHH+L AAH
Sbjct: 209 VRKHQANSHAKKGWEQFTDVVIKTISQKKEGVVFLLWGNSAREKSRLIDARKHHVLTAAH 268

Query: 181 PSGLSASRGFFGCRHFSRTNQLLEEMGMSPIVWQL 285
           PSGLSA+RGFFGCRHFSRTNQLLE+MG+ PI WQL
Sbjct: 269 PSGLSANRGFFGCRHFSRTNQLLEQMGIDPIDWQL 303


>emb|CAE03228.1| OSJNBa0018M05.3 [Oryza sativa Japonica Group]
           gi|222629761|gb|EEE61893.1| hypothetical protein
           OsJ_16593 [Oryza sativa Japonica Group]
          Length = 303

 Score =  166 bits (421), Expect = 2e-39
 Identities = 76/95 (80%), Positives = 87/95 (91%)
 Frame = +1

Query: 1   VRQHQANSHAKKGWEQYTDAVIETISKKKRGVVFLLWGNYAQVKSRLIDGTKHHILKAAH 180
           VR+HQANSHAKKGWEQ+TDAVI+TIS KK G+VF+LWGN AQ K+RLID TKHHILK+AH
Sbjct: 209 VREHQANSHAKKGWEQFTDAVIKTISLKKSGIVFILWGNSAQAKTRLIDETKHHILKSAH 268

Query: 181 PSGLSASRGFFGCRHFSRTNQLLEEMGMSPIVWQL 285
           PSGLSASRGFFGCRHFS+TNQ+LE +G+S I WQL
Sbjct: 269 PSGLSASRGFFGCRHFSKTNQILERLGLSAIDWQL 303


>ref|XP_002316140.1| predicted protein [Populus trichocarpa] gi|222865180|gb|EEF02311.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/94 (81%), Positives = 86/94 (91%)
 Frame = +1

Query: 1   VRQHQANSHAKKGWEQYTDAVIETISKKKRGVVFLLWGNYAQVKSRLIDGTKHHILKAAH 180
           VR HQANSH+KKGWE +TDAVI+TIS+KK GVVFLLWGN AQ KS+LID TKHHILKAAH
Sbjct: 123 VRNHQANSHSKKGWEHFTDAVIKTISQKKEGVVFLLWGNSAQEKSKLIDQTKHHILKAAH 182

Query: 181 PSGLSASRGFFGCRHFSRTNQLLEEMGMSPIVWQ 282
           PSGLSA+RGFFGCRHFSRTN+LL +MG+SPI WQ
Sbjct: 183 PSGLSANRGFFGCRHFSRTNKLLAQMGISPIEWQ 216


Top