BLASTX nr result

ID: Bupleurum21_contig00023963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023963
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308907.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002533678.1| RNA binding protein, putative [Ricinus commu...   179   3e-43
ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 prote...   174   5e-42
ref|XP_004171080.1| PREDICTED: uncharacterized protein LOC101231...   172   2e-41
ref|XP_004152940.1| PREDICTED: uncharacterized protein LOC101217...   172   2e-41

>ref|XP_002308907.1| predicted protein [Populus trichocarpa] gi|222854883|gb|EEE92430.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/144 (63%), Positives = 116/144 (80%)
 Frame = +1

Query: 1   LPNSLSTHFSLSKMAQELAQNRFNIKE*CVTVPPSGKNGESLVLPNLKLKVLIEAIRIIL 180
           L +S+S  FS+ +M +E+ +NRF+I+  CV +      GE+LVLPNLKLKV IEAIRI+L
Sbjct: 120 LYHSVSKRFSIEEMGREIFENRFDIEAHCVKM---SDEGETLVLPNLKLKVFIEAIRIVL 176

Query: 181 QVLYDDRFVTFSYGGRVDMRRHTAIRYLKNCVENPSWWFSVCFDNVVFDSKHVDKLCVFL 360
           +++YDDRFVTFSYGGRV+M RHTAIRYLKN V NPSWWFSVCF++V FD + VDKL +F+
Sbjct: 177 EIVYDDRFVTFSYGGRVNMGRHTAIRYLKNSVNNPSWWFSVCFNDVKFDKRKVDKLYLFI 236

Query: 361 EEKIKDEIFIDMIRLFFDYGVVRI 432
           EEKIKD I ID+I+  FD GV++I
Sbjct: 237 EEKIKDGILIDVIKRLFDCGVLKI 260


>ref|XP_002533678.1| RNA binding protein, putative [Ricinus communis]
           gi|223526429|gb|EEF28708.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 751

 Score =  179 bits (453), Expect = 3e-43
 Identities = 83/141 (58%), Positives = 110/141 (78%)
 Frame = +1

Query: 10  SLSTHFSLSKMAQELAQNRFNIKE*CVTVPPSGKNGESLVLPNLKLKVLIEAIRIILQVL 189
           S+S HFS+ +M +E+   RF+++  C         GESLVLPNLKLKV IEAIR++L+++
Sbjct: 87  SVSKHFSIEEMGREVFDKRFDLESHCARF---ASKGESLVLPNLKLKVFIEAIRVVLEIV 143

Query: 190 YDDRFVTFSYGGRVDMRRHTAIRYLKNCVENPSWWFSVCFDNVVFDSKHVDKLCVFLEEK 369
           YDDRFVTF YGGRV+M RHTAIRYLKN V++PSWWFSVCF  + FDS+++DKLC+F+EEK
Sbjct: 144 YDDRFVTFCYGGRVNMGRHTAIRYLKNTVKDPSWWFSVCFSRLKFDSRNLDKLCLFIEEK 203

Query: 370 IKDEIFIDMIRLFFDYGVVRI 432
           I D + ID+I+  F+ GV+ I
Sbjct: 204 INDGVLIDVIKRLFECGVLNI 224


>ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 protein-like [Vitis
           vinifera]
          Length = 757

 Score =  174 bits (442), Expect = 5e-42
 Identities = 79/141 (56%), Positives = 112/141 (79%)
 Frame = +1

Query: 10  SLSTHFSLSKMAQELAQNRFNIKE*CVTVPPSGKNGESLVLPNLKLKVLIEAIRIILQVL 189
           +++  FS+ ++ +EL +NRF+++  CV + PS K GESLVLPNLKLKV+IEAIR++L+++
Sbjct: 90  AVALRFSVEELGRELGENRFDVESCCVRMVPSRKKGESLVLPNLKLKVVIEAIRMVLEIV 149

Query: 190 YDDRFVTFSYGGRVDMRRHTAIRYLKNCVENPSWWFSVCFDNVVFDSKHVDKLCVFLEEK 369
           YD+R VTF+YGGRV M RHTAIRYLKN V+NP+WWF V FD   F+ K+V+KLC+ +EEK
Sbjct: 150 YDERLVTFAYGGRVGMGRHTAIRYLKNSVQNPNWWFKVTFDREKFEHKNVNKLCLIIEEK 209

Query: 370 IKDEIFIDMIRLFFDYGVVRI 432
           IKD + I ++R  F+  V++I
Sbjct: 210 IKDTVLIGIVRKLFECEVLQI 230


>ref|XP_004171080.1| PREDICTED: uncharacterized protein LOC101231062 [Cucumis sativus]
          Length = 768

 Score =  172 bits (437), Expect = 2e-41
 Identities = 81/140 (57%), Positives = 110/140 (78%)
 Frame = +1

Query: 13  LSTHFSLSKMAQELAQNRFNIKE*CVTVPPSGKNGESLVLPNLKLKVLIEAIRIILQVLY 192
           +S  FS+  MA+EL++NRF++   CV + P  + GESL+LPNLKLKVLIEAIR++++++Y
Sbjct: 169 VSKCFSVEVMARELSENRFDVGACCVPMAPLEEKGESLLLPNLKLKVLIEAIRMVMEIVY 228

Query: 193 DDRFVTFSYGGRVDMRRHTAIRYLKNCVENPSWWFSVCFDNVVFDSKHVDKLCVFLEEKI 372
           D+RFVTFSYGGRV M RHTAIRYLKN V+NPSWWF+V F    F+S HV+ LC+ ++EKI
Sbjct: 229 DERFVTFSYGGRVGMGRHTAIRYLKNSVQNPSWWFTVAFRRKKFESVHVNTLCLLMQEKI 288

Query: 373 KDEIFIDMIRLFFDYGVVRI 432
           KD+I I M+R  F+   ++I
Sbjct: 289 KDDILIYMLRKLFEVEAIQI 308


>ref|XP_004152940.1| PREDICTED: uncharacterized protein LOC101217546 [Cucumis sativus]
          Length = 751

 Score =  172 bits (437), Expect = 2e-41
 Identities = 81/140 (57%), Positives = 110/140 (78%)
 Frame = +1

Query: 13  LSTHFSLSKMAQELAQNRFNIKE*CVTVPPSGKNGESLVLPNLKLKVLIEAIRIILQVLY 192
           +S  FS+  MA+EL++NRF++   CV + P  + GESL+LPNLKLKVLIEAIR++++++Y
Sbjct: 152 VSKCFSVEVMARELSENRFDVGACCVPMAPLEEKGESLLLPNLKLKVLIEAIRMVMEIVY 211

Query: 193 DDRFVTFSYGGRVDMRRHTAIRYLKNCVENPSWWFSVCFDNVVFDSKHVDKLCVFLEEKI 372
           D+RFVTFSYGGRV M RHTAIRYLKN V+NPSWWF+V F    F+S HV+ LC+ ++EKI
Sbjct: 212 DERFVTFSYGGRVGMGRHTAIRYLKNSVQNPSWWFTVAFRRKKFESVHVNTLCLLMQEKI 271

Query: 373 KDEIFIDMIRLFFDYGVVRI 432
           KD+I I M+R  F+   ++I
Sbjct: 272 KDDILIYMLRKLFEVEAIQI 291


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