BLASTX nr result

ID: Bupleurum21_contig00023947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023947
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274220.2| PREDICTED: protein argonaute 2-like [Vitis v...   100   1e-19
emb|CBI29068.3| unnamed protein product [Vitis vinifera]              100   1e-19
emb|CAN66699.1| hypothetical protein VITISV_007817 [Vitis vinifera]   100   1e-19
ref|XP_002520550.1| eukaryotic translation initiation factor 2c,...    85   7e-15
ref|XP_002332150.1| argonaute protein group [Populus trichocarpa...    85   7e-15

>ref|XP_002274220.2| PREDICTED: protein argonaute 2-like [Vitis vinifera]
          Length = 1038

 Score =  100 bits (250), Expect = 1e-19
 Identities = 44/83 (53%), Positives = 61/83 (73%)
 Frame = -2

Query: 250 VKVDREKCQWNLIGNCVVDGKSLDRWALIDFSASEGKNRLNPEIFVSSLRSRCKKLGIRM 71
           + VDR +C WN +G  VV+GK +DRWA++DFSA EG NRLNP+ F+     RC  LGIRM
Sbjct: 599 ITVDRNRCHWNFVGKSVVEGKHIDRWAVLDFSAYEGFNRLNPDHFIPKFIRRCASLGIRM 658

Query: 70  QKPLAIKSTKMDAFTSVNRLRDL 2
            +PL  +S++M+AF++V  LR+L
Sbjct: 659 DEPLLYQSSRMNAFSNVAMLREL 681


>emb|CBI29068.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score =  100 bits (250), Expect = 1e-19
 Identities = 44/83 (53%), Positives = 61/83 (73%)
 Frame = -2

Query: 250 VKVDREKCQWNLIGNCVVDGKSLDRWALIDFSASEGKNRLNPEIFVSSLRSRCKKLGIRM 71
           + VDR +C WN +G  VV+GK +DRWA++DFSA EG NRLNP+ F+     RC  LGIRM
Sbjct: 555 ITVDRNRCHWNFVGKSVVEGKHIDRWAVLDFSAYEGFNRLNPDHFIPKFIRRCASLGIRM 614

Query: 70  QKPLAIKSTKMDAFTSVNRLRDL 2
            +PL  +S++M+AF++V  LR+L
Sbjct: 615 DEPLLYQSSRMNAFSNVAMLREL 637


>emb|CAN66699.1| hypothetical protein VITISV_007817 [Vitis vinifera]
          Length = 1059

 Score =  100 bits (250), Expect = 1e-19
 Identities = 44/83 (53%), Positives = 61/83 (73%)
 Frame = -2

Query: 250 VKVDREKCQWNLIGNCVVDGKSLDRWALIDFSASEGKNRLNPEIFVSSLRSRCKKLGIRM 71
           + VDR +C WN +G  VV+GK +DRWA++DFSA EG NRLNP+ F+     RC  LGIRM
Sbjct: 620 ITVDRNRCHWNFVGKSVVEGKHIDRWAVLDFSAYEGFNRLNPDHFIPKFIRRCASLGIRM 679

Query: 70  QKPLAIKSTKMDAFTSVNRLRDL 2
            +PL  +S++M+AF++V  LR+L
Sbjct: 680 DEPLLYQSSRMNAFSNVAMLREL 702


>ref|XP_002520550.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223540264|gb|EEF41836.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 492

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
 Frame = -2

Query: 250 VKVDREKCQWNLIGNCVVDGKSLDRWALIDFSASE-GKNRLNPEIFVSSLRSRCKKLGIR 74
           + VD+EKC WNL+G  VV+GK+++ WA++DFS+SE G+ RL  E F+S L +RCK LGI 
Sbjct: 46  IAVDKEKCHWNLVGKGVVEGKAIELWAVLDFSSSERGRFRLMQEQFISKLTARCKNLGIS 105

Query: 73  MQKPLAIKSTKMDAFTSVNRLRDL 2
           + KPL    + M   T+++ L  L
Sbjct: 106 INKPLFCHPSTMHKLTNIDLLHHL 129


>ref|XP_002332150.1| argonaute protein group [Populus trichocarpa]
           gi|222875200|gb|EEF12331.1| argonaute protein group
           [Populus trichocarpa]
          Length = 1020

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
 Frame = -2

Query: 250 VKVDREKCQWNLIGNCVVDGKSLDRWALIDFSASEGKNRLNPEIFVSSLRSRCKKLGIRM 71
           V VD EKCQWNL+G  VV+GK ++RWA++DFS+ + +  LN + F+  L +RC KLGIRM
Sbjct: 576 VPVD-EKCQWNLVGKGVVEGKPIERWAVLDFSSDDYQCPLNADHFIPKLIARCLKLGIRM 634

Query: 70  QKPLAIKSTKMDAF--TSVNRLRDL 2
           ++PL  + T M  F  ++V+RLR+L
Sbjct: 635 EEPLFYEPTSMRLFSNSNVDRLREL 659


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