BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023929
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
ref|XP_002324422.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37
ref|XP_002514292.1| pentatricopeptide repeat-containing protein,...   153   1e-35
ref|XP_002324819.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35

>ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
           [Vitis vinifera] gi|297738818|emb|CBI28063.3| unnamed
           protein product [Vitis vinifera]
          Length = 636

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/99 (77%), Positives = 86/99 (86%)
 Frame = -1

Query: 299 FEDMEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCS 120
           F+DM KAGI+ DIHAFSILAKGYVR+GEPEKAE +L  M KS V PNVVIFTT+ISGWCS
Sbjct: 375 FDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCS 434

Query: 119 AGKMDNAMRVYEMMCEMDISPNVKTFETLIWGFGEAKQP 3
           AGKM+ A RVYE MCEM I PN+KTFETLIWG+GEAK+P
Sbjct: 435 AGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEP 473



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/90 (33%), Positives = 52/90 (57%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M  +G+  D+  ++ LA+ Y ++GE  +AE ++  M+ + V+PN      +I+G+C  GK
Sbjct: 238 MAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGK 297

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGF 21
           M +A+R    M    + PN+  F +LI GF
Sbjct: 298 MKDALRFLYRMRNYGVHPNLVIFNSLIKGF 327



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/96 (29%), Positives = 51/96 (53%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M   G+  ++  F+ L KG++   + +  +E L  M +  V P+VV F+T+++ W S G 
Sbjct: 308 MRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGL 367

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGFGEAKQP 3
           MD    +++ M +  I P++  F  L  G+  A +P
Sbjct: 368 MDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEP 403


>ref|XP_002324422.1| predicted protein [Populus trichocarpa] gi|222865856|gb|EEF02987.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/99 (76%), Positives = 86/99 (86%)
 Frame = -1

Query: 299 FEDMEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCS 120
           F DM KA I+ DIHAFSILAKGYVR+GEPEKAE IL  MRK  V PNVVI TTVISGWCS
Sbjct: 316 FNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCS 375

Query: 119 AGKMDNAMRVYEMMCEMDISPNVKTFETLIWGFGEAKQP 3
           AGKM++AM+VYE MCE+ +SPN+KT+ETLIWG+GEAKQP
Sbjct: 376 AGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQP 414



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/96 (31%), Positives = 58/96 (60%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M++ G+  ++  F+ L KG++ + + E  +E+L  M ++ V P+VV F+T+++ W SAG+
Sbjct: 249 MKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGR 308

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGFGEAKQP 3
           MD    ++  M + +I P++  F  L  G+  A +P
Sbjct: 309 MDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEP 344



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/90 (33%), Positives = 48/90 (53%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M  +G+  D   ++ LA+ Y   GE  +AEE++  M    V PN    + +++G+C  G 
Sbjct: 179 MVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGN 238

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGF 21
           M +A R    M E+ + PN+  F +LI GF
Sbjct: 239 MVDASRFVFRMKELGVLPNLFVFNSLIKGF 268



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/95 (27%), Positives = 48/95 (50%)
 Frame = -1

Query: 299 FEDMEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCS 120
           F  M+++G       F+ L KGY  +G+ E+A ++L+F++   V PN   +  ++  WC+
Sbjct: 106 FRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCN 165

Query: 119 AGKMDNAMRVYEMMCEMDISPNVKTFETLIWGFGE 15
              M+ A  +   M    + P+  T+ TL   + E
Sbjct: 166 KENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAE 200


>ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
           gi|449518833|ref|XP_004166440.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
          Length = 609

 Score =  157 bits (397), Expect = 8e-37
 Identities = 71/99 (71%), Positives = 86/99 (86%)
 Frame = -1

Query: 299 FEDMEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCS 120
           F+DM K+GI+ DIH FSILAKG+VR+GEP KAE +L FM K  V PNVVIFTT+ISGWC+
Sbjct: 361 FDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCT 420

Query: 119 AGKMDNAMRVYEMMCEMDISPNVKTFETLIWGFGEAKQP 3
           AGKM+ A +V+E MC+MD+SPN+KTFETLIWG+GEAKQP
Sbjct: 421 AGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQP 459



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/96 (33%), Positives = 56/96 (58%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M   GI  ++  F+ L KG++  G+ +  ++ L  M +S V P+V+ F+T+++GW SAG+
Sbjct: 294 MRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGR 353

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGFGEAKQP 3
           MD    +++ M +  I P++  F  L  GF  A +P
Sbjct: 354 MDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEP 389



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/90 (34%), Positives = 48/90 (53%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M  +G+  D+  ++ LA+ Y + GE  KAE I+  M    V PN      ++ G+C  G 
Sbjct: 224 MLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGN 283

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGF 21
           +  A+RV   M ++ I PN+  F +LI GF
Sbjct: 284 LAEALRVVYRMRDLGIHPNLVIFNSLIKGF 313


>ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546748|gb|EEF48246.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 608

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/99 (73%), Positives = 82/99 (82%)
 Frame = -1

Query: 299 FEDMEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCS 120
           F DM KAGI+ DIHAFSILAKGYVR+GE E AE +L  M KS V PNVVI TT+ISGWCS
Sbjct: 362 FNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCS 421

Query: 119 AGKMDNAMRVYEMMCEMDISPNVKTFETLIWGFGEAKQP 3
           AGKM+NA  VYE MCE+ ISPN+KTFETLIWG+ EA+QP
Sbjct: 422 AGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQP 460



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/90 (34%), Positives = 51/90 (56%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M  +GI  D+  ++ILA+ Y + GE  +AE+++  M+   V PN      +++G+C  G 
Sbjct: 225 MVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGN 284

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGF 21
           M  A+R    M E+ + PN+  F +LI GF
Sbjct: 285 MIEALRFVYRMKELGVHPNLVIFNSLIKGF 314



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/93 (29%), Positives = 51/93 (54%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M++ G+  ++  F+ L KG++   + +  +E L  M +  V P+V+ F+T+++ W SAG 
Sbjct: 295 MKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGL 354

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGFGEA 12
           MD    ++  M +  I P++  F  L  G+  A
Sbjct: 355 MDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRA 387


>ref|XP_002324819.1| predicted protein [Populus trichocarpa] gi|222866253|gb|EEF03384.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/99 (73%), Positives = 84/99 (84%)
 Frame = -1

Query: 299 FEDMEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCS 120
           F+DM KAGI+ D HA+SILAKGYVR+ EPEKAEE+L  M KS   PNVVIFTTVISGWCS
Sbjct: 317 FDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCS 376

Query: 119 AGKMDNAMRVYEMMCEMDISPNVKTFETLIWGFGEAKQP 3
           AGKMD A+RV++ MC+  ISPN+KTFETLIWGF EA+QP
Sbjct: 377 AGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQP 415



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/96 (28%), Positives = 55/96 (57%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M++ GI  ++  F+ L KG+V   + +  +E+L  M +  V P+V+ F+T+++ W +AG 
Sbjct: 250 MKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGF 309

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGFGEAKQP 3
           M+    +++ M +  I P+   +  L  G+  A++P
Sbjct: 310 MEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEP 345



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/90 (32%), Positives = 50/90 (55%)
 Frame = -1

Query: 290 MEKAGIDADIHAFSILAKGYVRSGEPEKAEEILQFMRKSDVLPNVVIFTTVISGWCSAGK 111
           M  +GI  D+  ++ +A  Y + G  ++AE ++  M+ + V PN      ++SG+C  G+
Sbjct: 180 MIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGR 239

Query: 110 MDNAMRVYEMMCEMDISPNVKTFETLIWGF 21
           +  A+R    M E+ I PN+  F +LI GF
Sbjct: 240 IREALRFAYRMKELGIHPNLVIFNSLIKGF 269