BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023872
         (1824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307797.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|XP_002510687.1| pentatricopeptide repeat-containing protein,...   498   e-138
emb|CAN74746.1| hypothetical protein VITISV_012024 [Vitis vinifera]   486   e-134
ref|XP_002272601.1| PREDICTED: pentatricopeptide repeat-containi...   484   e-134
ref|XP_003528528.1| PREDICTED: pentatricopeptide repeat-containi...   466   e-129

>ref|XP_002307797.1| predicted protein [Populus trichocarpa] gi|222857246|gb|EEE94793.1|
            predicted protein [Populus trichocarpa]
          Length = 475

 Score =  510 bits (1313), Expect = e-142
 Identities = 275/497 (55%), Positives = 339/497 (68%), Gaps = 6/497 (1%)
 Frame = +3

Query: 228  LVNSNTRIYSRKNPKNLRYPRQAKLQPDLGMNTYLKK-KTSPVNEEPGYNCENQLLERPV 404
            + +S+TRI  RK PKN+RYPR++KL PD G+N +LKK +T  V +      E +  E   
Sbjct: 1    MAHSSTRICYRKIPKNIRYPRRSKLPPDFGVNLFLKKPQTDSVQDHSDDLTEEE--EEEE 58

Query: 405  FDFVDSETXXXXXXXXXXXXXXXXGVRGTTXXXXXXXXXXXXXXXWSSDEIEAISSLFRG 584
             +  + E                                      W S+EIEAISSLFRG
Sbjct: 59   IEVNNGEIV------------------------------------WESEEIEAISSLFRG 82

Query: 585  RIPQXXXXXXXXXXXXXXXXXXIRPLGLPTPKNF-----SMSWRKSISGQLYKGPNFLIE 749
            RIPQ                  +RPLGLP PK       S+S R SIS Q+YK P+FLI 
Sbjct: 83   RIPQKPGKLGRERPLPLPVPYKLRPLGLPAPKKHVNKQVSLS-RASISSQIYKNPSFLIG 141

Query: 750  LAREIRSLPPDEDASVVLDNYARFIRKGSLSLTIRELGHMDLPHRALQIFCWAQKQPLLF 929
            LA+EI+ L PD+D SVVLDN +R++ KGSLSLTIRELGH+ LP RALQ FCW QKQP LF
Sbjct: 142  LAKEIKRLSPDQDVSVVLDNCSRYLHKGSLSLTIRELGHLGLPERALQTFCWVQKQPRLF 201

Query: 930  PDDRILASTVEVLARGKELKMPFNLEEFTSLASKNVYEAMIRGLIRGRNLKLALKLLSDA 1109
            PDDR+LASTVEVLAR  +LK+PFNLE+FT+LAS+ V EAM++GLIRG +LKL+ KL+S A
Sbjct: 202  PDDRVLASTVEVLARNHDLKVPFNLEKFTNLASRRVIEAMVKGLIRGGSLKLSWKLISVA 261

Query: 1110 RNGNRVLDASIYAKLILEFGNNPDKYMLVTXXXXXXXXXXXXXXAQQDCTAVMKICIRLQ 1289
            ++G R+LD S+YAK+ILE G NPDK++L                +QQDCTAVMK+CI+L 
Sbjct: 262  KDGKRMLDPSVYAKIILELGKNPDKHVLAEALLDELAEREDLNLSQQDCTAVMKVCIKLG 321

Query: 1290 KFEIVESLFDWFKQSGGEPSIVMYTTLVHSRYSDKKYREALAVVWEMEASNCIFDLPAYR 1469
            KFE VESLF+WF+QSG EPS+VMYTTL+HSRYS+ KYREALAVVWEME S+C+FDL AYR
Sbjct: 322  KFEAVESLFNWFRQSGHEPSVVMYTTLIHSRYSESKYREALAVVWEMEGSDCLFDLTAYR 381

Query: 1470 VVIRLFVALKDISRAARYFSKLKEAGFSPTFSIYRDMIRVYVESGRMAKFKEVCREAETA 1649
            VVI+LFVAL D+ RA RYFSKLKEAG SPT+ IYR++I +Y+ SGR+AK KEV +EAE A
Sbjct: 382  VVIKLFVALNDLPRAVRYFSKLKEAGLSPTYDIYRNLITLYMVSGRLAKCKEVWKEAEMA 441

Query: 1650 GFMLDKETRSMLSQFER 1700
            GF   KE  + L Q +R
Sbjct: 442  GFKFSKEMAAGLLQLKR 458


>ref|XP_002510687.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551388|gb|EEF52874.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 469

 Score =  498 bits (1283), Expect = e-138
 Identities = 268/494 (54%), Positives = 335/494 (67%), Gaps = 5/494 (1%)
 Frame = +3

Query: 234  NSNTRIYSRKN-PKNLRYPRQAKLQPDLGMNTYLKKKTSPVNEEPGYNCENQLLERPVFD 410
            +SNT+ Y RK  PKNL+ PR++KL PD G+N +LKK T+ V+    +  ++ L++    D
Sbjct: 3    HSNTKTYYRKKLPKNLQSPRRSKLPPDFGVNLFLKKPTTGVDP---FQMDSFLVDDGDGD 59

Query: 411  FVDSETXXXXXXXXXXXXXXXXGVRGTTXXXXXXXXXXXXXXXWSSDEIEAISSLFRGRI 590
                E                                      W SDEIEAISSLF+GRI
Sbjct: 60   LNQEEKEQNGDIV------------------------------WESDEIEAISSLFQGRI 89

Query: 591  PQXXXXXXXXXXXXXXXXXXIRPLGLPTPK----NFSMSWRKSISGQLYKGPNFLIELAR 758
            PQ                  +RPLG P+PK    N  +S R  I  ++YK P+FLI LA+
Sbjct: 90   PQRPGNLNRERPLPLPLPHKLRPLGPPSPKKHNRNVVVSLRSPICNKVYKNPSFLISLAK 149

Query: 759  EIRSLPPDEDASVVLDNYARFIRKGSLSLTIRELGHMDLPHRALQIFCWAQKQPLLFPDD 938
            +I+ L PD+D S VLD+ ARF+RKGSLSLTIRELGHM  P RALQ FCWAQKQP L+PDD
Sbjct: 150  QIKCLNPDDDVSAVLDDCARFLRKGSLSLTIRELGHMGFPDRALQTFCWAQKQPQLYPDD 209

Query: 939  RILASTVEVLARGKELKMPFNLEEFTSLASKNVYEAMIRGLIRGRNLKLALKLLSDARNG 1118
            RILASTVE+LAR ++LK+P + ++FTSLAS+ V EAMIRG ++G  LKLA KLL+ A++ 
Sbjct: 210  RILASTVEILARNQDLKVPIDWQKFTSLASRGVIEAMIRGFLKGGRLKLAWKLLAVAKHD 269

Query: 1119 NRVLDASIYAKLILEFGNNPDKYMLVTXXXXXXXXXXXXXXAQQDCTAVMKICIRLQKFE 1298
             R+LDAS+YA+LILE G NPDKYMLV               + QDCTA+MK+CIRLQKFE
Sbjct: 270  KRMLDASLYARLILELGKNPDKYMLVEQLLDELGEREDLNLSHQDCTAIMKVCIRLQKFE 329

Query: 1299 IVESLFDWFKQSGGEPSIVMYTTLVHSRYSDKKYREALAVVWEMEASNCIFDLPAYRVVI 1478
             VE LF WFKQSG EPS+VMYTTL+HSRYS+KKYREALA VWEME S+ +FDLPAYRVVI
Sbjct: 330  FVECLFTWFKQSGHEPSVVMYTTLIHSRYSEKKYREALAGVWEMEGSSFLFDLPAYRVVI 389

Query: 1479 RLFVALKDISRAARYFSKLKEAGFSPTFSIYRDMIRVYVESGRMAKFKEVCREAETAGFM 1658
            +LFVAL D+ RA RYFSKLKEAG SPT+ IYR++I++Y+ SGR+AK KE+ +EAE AGF 
Sbjct: 390  KLFVALNDLPRAVRYFSKLKEAGLSPTYDIYRNLIKIYLVSGRLAKCKEIWKEAEMAGFK 449

Query: 1659 LDKETRSMLSQFER 1700
            LD++ +  L   E+
Sbjct: 450  LDEQIKMDLLHQEK 463


>emb|CAN74746.1| hypothetical protein VITISV_012024 [Vitis vinifera]
          Length = 514

 Score =  486 bits (1250), Expect = e-134
 Identities = 271/498 (54%), Positives = 329/498 (66%), Gaps = 8/498 (1%)
 Frame = +3

Query: 231  VNSNTRIYSRKNPKNLRYPRQAKLQPDLGMNTYLKKKTSPVNE-EPGYNCENQLLERPVF 407
            V  N R+  RK  KNL +PR+AKL P+  ++T+LK   S   + E G   + +L      
Sbjct: 43   VQCNARVNHRKPTKNLPHPRRAKLPPEPEISTFLKGGNSGTEQSEMGTVLDKELDPNDDG 102

Query: 408  DFVDSETXXXXXXXXXXXXXXXXGVRGTTXXXXXXXXXXXXXXXWSSDEIEAISSLFRGR 587
              VD                   G+ G                 W SDEIEAISSLF GR
Sbjct: 103  FLVD-------------------GIEGRKEGEIV----------WDSDEIEAISSLFMGR 133

Query: 588  IPQXXXXXXXXXXXXXXXXXXIRPLGLPTPKNF-----SMSW--RKSISGQLYKGPNFLI 746
            IPQ                  IRP+GLPT K       SM +  R S+S Q+YK P+FLI
Sbjct: 134  IPQKPGKLNRERPLPLPLPYKIRPMGLPTTKRHVRAASSMPYASRASLSKQVYKNPDFLI 193

Query: 747  ELAREIRSLPPDEDASVVLDNYARFIRKGSLSLTIRELGHMDLPHRALQIFCWAQKQPLL 926
             +AREIR+LP ++D S VL+ + RF+RKGSLSLTIRELGHM LP RALQ F WAQKQP L
Sbjct: 194  SIAREIRNLPLEDDVSPVLNKWVRFLRKGSLSLTIRELGHMGLPERALQTFFWAQKQPQL 253

Query: 927  FPDDRILASTVEVLARGKELKMPFNLEEFTSLASKNVYEAMIRGLIRGRNLKLALKLLSD 1106
            FPDDRILASTVEVLAR  +LK+PF+LE+FT LA+++V EA+ RG IR  +L LA KLL  
Sbjct: 254  FPDDRILASTVEVLARTHKLKVPFSLEKFTGLATRSVIEALARGFIRRGSLSLAWKLLLV 313

Query: 1107 ARNGNRVLDASIYAKLILEFGNNPDKYMLVTXXXXXXXXXXXXXXAQQDCTAVMKICIRL 1286
            A++  R+L  SIYAKLI E G NPDK+ LV               + QDCTAVMK+CIRL
Sbjct: 314  AKDSKRMLGPSIYAKLIFELGKNPDKHSLVQALLDELGEREDLKLSHQDCTAVMKVCIRL 373

Query: 1287 QKFEIVESLFDWFKQSGGEPSIVMYTTLVHSRYSDKKYREALAVVWEMEASNCIFDLPAY 1466
             KFEIVESLF+W+KQS   PS+VMYTTL+HSRY++KKYREALAVVWEMEAS+C+FDLPAY
Sbjct: 374  GKFEIVESLFNWYKQSENSPSVVMYTTLIHSRYTEKKYREALAVVWEMEASDCLFDLPAY 433

Query: 1467 RVVIRLFVALKDISRAARYFSKLKEAGFSPTFSIYRDMIRVYVESGRMAKFKEVCREAET 1646
            RVVI+LF+AL D+SR  RYFSKLKEAGFSPT+ IYRDM+++Y+   R+AK +EVC+E E 
Sbjct: 434  RVVIKLFIALNDLSRTGRYFSKLKEAGFSPTYDIYRDMLKIYMVFRRLAKCREVCKELEM 493

Query: 1647 AGFMLDKETRSMLSQFER 1700
            +GF LDK T S L Q ER
Sbjct: 494  SGFKLDKGTLSQLLQLER 511


>ref|XP_002272601.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01860-like
            [Vitis vinifera]
          Length = 514

 Score =  484 bits (1245), Expect = e-134
 Identities = 269/506 (53%), Positives = 330/506 (65%), Gaps = 16/506 (3%)
 Frame = +3

Query: 231  VNSNTRIYSRKNPKNLRYPRQAKLQPDLGMNTYLKKKTSP---------VNEEPGYNCEN 383
            V  N R+  RK  KNL +PR+AKL P+  ++T+LK   S          +++EP  N + 
Sbjct: 43   VQCNARVNHRKPTKNLPHPRRAKLPPEPEISTFLKGGNSGTEQSEMGTVLDKEPDANDDG 102

Query: 384  QLLERPVFDFVDSETXXXXXXXXXXXXXXXXGVRGTTXXXXXXXXXXXXXXXWSSDEIEA 563
             L++                           G+ G                 W SDEIEA
Sbjct: 103  FLVD---------------------------GIEGRKEGEIV----------WDSDEIEA 125

Query: 564  ISSLFRGRIPQXXXXXXXXXXXXXXXXXXIRPLGLPTPKNF-----SMSW--RKSISGQL 722
            ISSLF GRIPQ                  +RP+GLPT K       SM +  R S+S Q+
Sbjct: 126  ISSLFMGRIPQKPGKLNRERPLPLPLPYKLRPMGLPTTKRHVRAASSMPYASRASLSKQV 185

Query: 723  YKGPNFLIELAREIRSLPPDEDASVVLDNYARFIRKGSLSLTIRELGHMDLPHRALQIFC 902
            YK P+FLI +AREIR LP ++D S VL+ + RF+RKGSLSLTIRELGHM LP RALQ F 
Sbjct: 186  YKNPDFLISIAREIRKLPLEDDVSPVLNKWVRFLRKGSLSLTIRELGHMGLPERALQTFF 245

Query: 903  WAQKQPLLFPDDRILASTVEVLARGKELKMPFNLEEFTSLASKNVYEAMIRGLIRGRNLK 1082
            WAQKQP LFPDDRILASTVEVLAR  +LK+PF+LE+FT LAS++V EA+ RG IR  +L 
Sbjct: 246  WAQKQPQLFPDDRILASTVEVLARTHKLKVPFSLEKFTGLASRSVIEALARGFIRRGSLS 305

Query: 1083 LALKLLSDARNGNRVLDASIYAKLILEFGNNPDKYMLVTXXXXXXXXXXXXXXAQQDCTA 1262
            LA KLL  A++  R+L  SIYAKLI E G NPDK+ LV               + QDCTA
Sbjct: 306  LAWKLLLVAKDSKRMLGPSIYAKLIFELGKNPDKHSLVQALLDELGEREDLKLSHQDCTA 365

Query: 1263 VMKICIRLQKFEIVESLFDWFKQSGGEPSIVMYTTLVHSRYSDKKYREALAVVWEMEASN 1442
            VMK+CIRL KFEIVESLF+W+KQS   PS+VMYTTL+HSRY++KKYREALAVVWEMEAS+
Sbjct: 366  VMKVCIRLGKFEIVESLFNWYKQSENSPSVVMYTTLIHSRYTEKKYREALAVVWEMEASD 425

Query: 1443 CIFDLPAYRVVIRLFVALKDISRAARYFSKLKEAGFSPTFSIYRDMIRVYVESGRMAKFK 1622
            C+FDLPAYRVVI+LF+AL D+SR  RYFSKLKEAGFSPT+ IYRDM+++Y+   R+AK +
Sbjct: 426  CVFDLPAYRVVIKLFIALNDLSRTGRYFSKLKEAGFSPTYDIYRDMLKIYMVFRRLAKCR 485

Query: 1623 EVCREAETAGFMLDKETRSMLSQFER 1700
            EVC+E E +GF LDK T S L Q E+
Sbjct: 486  EVCKELEMSGFKLDKGTLSQLLQLEK 511


>ref|XP_003528528.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01860-like
            [Glycine max]
          Length = 478

 Score =  466 bits (1200), Expect = e-129
 Identities = 251/480 (52%), Positives = 316/480 (65%), Gaps = 10/480 (2%)
 Frame = +3

Query: 258  RKNPKNLRYPRQAKLQPDLGMNTYLKKKTS---PVNEEPGYNCENQLLERPVFDFVDSET 428
            R+ PK+ RY  + K  P+ G+N +LKK ++   P +++   N EN   E      V    
Sbjct: 34   RRPPKDNRYRPRPKQPPEFGVNLFLKKPSTASKPTDDDMDSNEENDEEEDGNIGVV---- 89

Query: 429  XXXXXXXXXXXXXXXXGVRGTTXXXXXXXXXXXXXXXWSSDEIEAISSLFRGRIPQXXXX 608
                                                 W SDE+EAISSLF+GRIPQ    
Sbjct: 90   -------------------------------------WESDELEAISSLFQGRIPQKPGK 112

Query: 609  XXXXXXXXXXXXXXIRPLGLPTPKN-------FSMSWRKSISGQLYKGPNFLIELAREIR 767
                          +RPL LPTPK          +S R S++ ++YK P+FL+ LAR+I 
Sbjct: 113  LDRERPLPLPVPFKLRPLRLPTPKTQVKLTAPAVVSSRASMAKKVYKSPSFLVGLARQIS 172

Query: 768  SLPPDEDASVVLDNYARFIRKGSLSLTIRELGHMDLPHRALQIFCWAQKQPLLFPDDRIL 947
             L PD D S +L  + +F+RKGSLSLTIRELGHM  P RALQ F WAQ QP LFPDD IL
Sbjct: 173  RLGPDADVSKILGKWVQFLRKGSLSLTIRELGHMGFPERALQTFLWAQNQPHLFPDDWIL 232

Query: 948  ASTVEVLARGKELKMPFNLEEFTSLASKNVYEAMIRGLIRGRNLKLALKLLSDARNGNRV 1127
            ASTVEVLAR  EL++PFNL ++T LAS+ V EAMI+G I+G NL+ A K+L  AR   R+
Sbjct: 233  ASTVEVLARNHELRIPFNLGQYTGLASRAVLEAMIKGFIKGGNLRFAWKVLIVARRDKRM 292

Query: 1128 LDASIYAKLILEFGNNPDKYMLVTXXXXXXXXXXXXXXAQQDCTAVMKICIRLQKFEIVE 1307
            LD+SIYAKLILE G NPD++  V               +QQDCTA+MK+C+++ KFE+VE
Sbjct: 293  LDSSIYAKLILELGKNPDRHRHVLPLLDELGERDELNLSQQDCTAIMKVCVKMGKFEVVE 352

Query: 1308 SLFDWFKQSGGEPSIVMYTTLVHSRYSDKKYREALAVVWEMEASNCIFDLPAYRVVIRLF 1487
            SLF WFKQSG +PSIVM+T+++HSRY++KKYREALAVVWEMEASNC+FDLPAYRVVI+LF
Sbjct: 353  SLFSWFKQSGYQPSIVMFTSVIHSRYTEKKYREALAVVWEMEASNCLFDLPAYRVVIKLF 412

Query: 1488 VALKDISRAARYFSKLKEAGFSPTFSIYRDMIRVYVESGRMAKFKEVCREAETAGFMLDK 1667
            VAL D+SRA RYFSKLKEAGFSP+F +Y+DM+++Y+ SGR+AK KE+CREAE AGF LDK
Sbjct: 413  VALNDLSRATRYFSKLKEAGFSPSFGLYKDMLQIYMASGRIAKCKELCREAEIAGFKLDK 472