BLASTX nr result

ID: Bupleurum21_contig00023861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023861
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72783.1| hypothetical protein VITISV_008016 [Vitis vinifera]    94   9e-18
ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854...    87   1e-15
emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]    87   2e-15
ref|XP_003533097.1| PREDICTED: B3 domain-containing transcriptio...    86   4e-15
emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]    84   2e-14

>emb|CAN72783.1| hypothetical protein VITISV_008016 [Vitis vinifera]
          Length = 749

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
 Frame = +2

Query: 86   KKNIPNFATKV--DSHDGVCLRPKSQKHKTQDVREPATEEAKVRAIVSAGTFKSDNPFFI 259
            +K+ P F  KV  D+ +G   R  +Q+          T   KV A++ A +FK  NPFFI
Sbjct: 597  EKSTPEFRDKVNFDAKEGGEGRATAQRGIISQXVPAVTASKKVGALLRAESFKPQNPFFI 656

Query: 260  VPMKPSHVDGNGCGMAVKKTFEERYKMWKQNDQVTLQVDGR-TWLVNCDMKWNRCRLSIG 436
            V M+PS+V G G  M +   F +R+     + + TL+V  R TW +   ++    +LS G
Sbjct: 657  VTMRPSYV-GTGXNMXIPLRFVKRH-FTTDDKKTTLRVSNRRTWTLKYCIRRRDAKLSSG 714

Query: 437  WDKFAQDNSLSVGDVCVFELINPSKKLIQ 523
            W KFA+DN L VGDVCVFELIN +  L++
Sbjct: 715  WRKFARDNYLQVGDVCVFELINSTANLLK 743



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
 Frame = +2

Query: 155 QKHKTQDVREPATEEAKVRAIVSAGTFKSDNPFFIVPMKPSHVDGNGCGMAVKKTFEERY 334
           Q++    V  P T   +V A+  A  F  +NPFF   M PS++  +  G+ +   F ERY
Sbjct: 293 QRNVLSGVLPPVTASKEVGALQRAIAFNPENPFFRAKMGPSYLGPSRHGLNIPIWFVERY 352

Query: 335 KMWKQNDQ-VTL-QVDGRTWLVNCDMKWNRC------RLSIGWDKFAQDNSLSVGDVCVF 490
             +K +D+ +TL   DGRTW  +  +   R        L  GW  F QDN L +GDVCVF
Sbjct: 353 --FKTDDKSITLWGSDGRTWSTSYRLGRRRNGKRVAELLYSGWKIFVQDNQLKLGDVCVF 410

Query: 491 ELI 499
            LI
Sbjct: 411 VLI 413


>ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854873 [Vitis vinifera]
          Length = 1020

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = +2

Query: 185  PATEEAKVRAIVSAGTFKSDNPFFIVPMKPSHVDGNGCGMAVKKTFEERYKMWKQNDQVT 364
            P  E+ +  A+  A  FK +NPFFIV M+PS++ G+  G+++  +F +R+     N + T
Sbjct: 891  PKVEDIQGGALGRAKAFKFENPFFIVTMRPSYI-GSWYGLSIPLSFVKRH-FKTDNKKTT 948

Query: 365  LQV-DGRTWLVN-CDMKWNRCRLSIGWDKFAQDNSLSVGDVCVFELI 499
            L V DGRTW V    MK ++ + S GW KFA+DNSL VGDVC FELI
Sbjct: 949  LSVSDGRTWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDVCAFELI 995


>emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]
          Length = 352

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
 Frame = +2

Query: 185 PATEEAKVRAIVSAGTFKSDNPFFIVPMKPSHVDGNGCGMAVKKTFEERYKMWKQNDQVT 364
           P  E+ +  A+  A  FK +NPFFIV M+PS+V G+  G+++  +F +R+     N    
Sbjct: 223 PKVEDIQGGALGRAKAFKFENPFFIVTMRPSYV-GSWYGLSIPLSFVKRHFKTDXNKTTL 281

Query: 365 LQVDGRTWLVN-CDMKWNRCRLSIGWDKFAQDNSLSVGDVCVFELI 499
              DGRTW V    MK ++ + S GW KFA+DNSL VGDVC FELI
Sbjct: 282 SVSDGRTWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDVCAFELI 327


>ref|XP_003533097.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 430

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
 Frame = +2

Query: 185 PATEEAKVRAIVSAGTFKSDNPFFIVPMKPSHVDGNGCGMAVKKTFEERYKMWKQNDQVT 364
           P  E++   A+  A TF+S++PFF + MKPS +  NG  + +   F ERY + K +  V 
Sbjct: 208 PKVEQSTSTALKKASTFRSEHPFFRLVMKPSFI--NGYYLEIPPQFAERY-LKKTHAIVI 264

Query: 365 LQV-DGRTWLVNCDMKWNRCRLSIGWDKFAQDNSLSVGDVCVFELI 499
           L++ DGRTW V C    +  RL+ GW KFA +N+L+VGDVCVFELI
Sbjct: 265 LEILDGRTWSVIC----SATRLTEGWQKFASENNLNVGDVCVFELI 306


>emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]
          Length = 617

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/105 (40%), Positives = 62/105 (59%)
 Frame = +2

Query: 185 PATEEAKVRAIVSAGTFKSDNPFFIVPMKPSHVDGNGCGMAVKKTFEERYKMWKQNDQVT 364
           P  E+ +  A+  A +FK + PFFI+ M+PS+V G+   + V  +F +R+     N+ + 
Sbjct: 150 PKVEDIQGGALERAKSFKFEKPFFIITMRPSYV-GSKKSLTVPLSFVKRHFKRDNNNTIL 208

Query: 365 LQVDGRTWLVNCDMKWNRCRLSIGWDKFAQDNSLSVGDVCVFELI 499
              DGRTW V    + N  + S GW KF +DNSL VGDVC FEL+
Sbjct: 209 SVSDGRTWSVKYIKRKNNVQFSSGWTKFVRDNSLEVGDVCAFELV 253



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 49/114 (42%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
 Frame = +2

Query: 173 DVREPATEEAKV----RAIVSAGTFKSDNPFFIVPMKPSHVDGNGCGMAVKKTFEERYKM 340
           D R+ A + AKV      +  A  FK  NPFFIV M  S+V  N   + V   F +R+  
Sbjct: 483 DCRDGALQRAKVFKPQNPLQRAKAFKPQNPFFIVTMGWSYV--NRHNVTVPFHFLKRH-F 539

Query: 341 WKQNDQVTLQV-DGRTWLVNCDMKWNRCRLSIGWDKFAQDNSLSVGDVCVFELI 499
              N   TL V DGR W +   M       S GW KFA+DNSL VGDVC FEL+
Sbjct: 540 RTDNTNTTLSVSDGRAWSIKYIMGARSAHFSAGWRKFAEDNSLEVGDVCAFELV 593


Top