BLASTX nr result

ID: Bupleurum21_contig00023858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023858
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28327.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002276067.1| PREDICTED: TGACG-sequence-specific DNA-bindi...    95   7e-18
ref|XP_002523796.1| DNA binding protein, putative [Ricinus commu...    84   1e-14
ref|XP_002328121.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_003539827.1| PREDICTED: TGACG-sequence-specific DNA-bindi...    79   4e-13

>emb|CBI28327.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 60/112 (53%), Positives = 70/112 (62%)
 Frame = -2

Query: 340 MRPQQTSRVSSRSGGESTDSGSAVNTLSSKAGIHLEPESPLSRKASSDYQQTFDHNNFQF 161
           MR QQT R SS+SGGESTDSGSAVNTLSS+A   LEPESP+S K +SD+ Q FD  + QF
Sbjct: 86  MRFQQTQRGSSKSGGESTDSGSAVNTLSSRAEAQLEPESPISIKPTSDH-QAFDQKHLQF 144

Query: 160 PQENHHQQQLQAVEMAXXXXXXXXXXXXXXXXSNPILEKRRGLGATSDRVLD 5
                HQQQL   EMA                S P  EKR+G G+TS++ LD
Sbjct: 145 ----QHQQQL---EMASDTSRLAGPSESQPAASKPPPEKRKGAGSTSEKTLD 189


>ref|XP_002276067.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like
           [Vitis vinifera]
          Length = 472

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 60/112 (53%), Positives = 70/112 (62%)
 Frame = -2

Query: 340 MRPQQTSRVSSRSGGESTDSGSAVNTLSSKAGIHLEPESPLSRKASSDYQQTFDHNNFQF 161
           MR QQT R SS+SGGESTDSGSAVNTLSS+A   LEPESP+S K +SD+ Q FD  + QF
Sbjct: 86  MRFQQTQRGSSKSGGESTDSGSAVNTLSSRAEAQLEPESPISIKPTSDH-QAFDQKHLQF 144

Query: 160 PQENHHQQQLQAVEMAXXXXXXXXXXXXXXXXSNPILEKRRGLGATSDRVLD 5
                HQQQL   EMA                S P  EKR+G G+TS++ LD
Sbjct: 145 ----QHQQQL---EMASDTSRLAGPSESQPAASKPPPEKRKGAGSTSEKTLD 189


>ref|XP_002523796.1| DNA binding protein, putative [Ricinus communis]
           gi|223536884|gb|EEF38522.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 443

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 55/112 (49%), Positives = 66/112 (58%)
 Frame = -2

Query: 340 MRPQQTSRVSSRSGGESTDSGSAVNTLSSKAGIHLEPESPLSRKASSDYQQTFDHNNFQF 161
           MR Q T R SS+SGGESTDSGSAVNTLSSKA   LEPESP+S+KASSD+ Q FD  + Q 
Sbjct: 88  MRFQHTPRGSSKSGGESTDSGSAVNTLSSKADAQLEPESPISKKASSDH-QGFDQKHLQL 146

Query: 160 PQENHHQQQLQAVEMAXXXXXXXXXXXXXXXXSNPILEKRRGLGATSDRVLD 5
                 QQQ Q +EMA                S     + +  G+TS++ LD
Sbjct: 147 ------QQQQQQLEMASDTSRTGGGGPSELNPSPAKTPQEKRKGSTSEKQLD 192


>ref|XP_002328121.1| predicted protein [Populus trichocarpa] gi|222837636|gb|EEE76001.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/78 (61%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
 Frame = -2

Query: 340 MRPQQTSRVSSRSGGESTDSGSAVNTLSSKAGIHLEPESPLSRKASSD--YQQTFDHNNF 167
           +R QQT R SS+SGGESTDSGSA NTLSSKA  HLEPESP+S+KASS   Y Q FD  + 
Sbjct: 81  IRFQQTPRGSSKSGGESTDSGSATNTLSSKADAHLEPESPISKKASSSDHYNQAFDQKHL 140

Query: 166 QFPQENHHQQQLQAVEMA 113
           QF       Q  Q V+MA
Sbjct: 141 QF-------QDQQQVDMA 151


>ref|XP_003539827.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1
           [Glycine max]
          Length = 462

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 52/113 (46%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
 Frame = -2

Query: 340 MRPQQTSRVSSRSGGESTDSGSAVNTLSSKAGIHLEPESPLSRKAS-SDYQQTFDHNNFQ 164
           MR QQTSR  S+SGGESTDSGS VNTLS+K  +  E ESP+S KAS SD+ Q FD +   
Sbjct: 84  MRFQQTSRGGSKSGGESTDSGSGVNTLSTKNELRFETESPISIKASPSDHHQAFDQH--- 140

Query: 163 FPQENHHQQQLQAVEMAXXXXXXXXXXXXXXXXSNPILEKRRGLGATSDRVLD 5
             Q+   QQQ Q    A                     EKR+G G+TS++ LD
Sbjct: 141 LQQQQQQQQQQQETATAGTSSQNQSAAKSPQ-------EKRKGAGSTSEKPLD 186


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