BLASTX nr result

ID: Bupleurum21_contig00023848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023848
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagell...   105   4e-21
ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1...   103   1e-20
ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thalia...   100   9e-20
ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]...   100   1e-19
gb|AAL57365.1|AF404866_1 neuronal nitric oxide synthase protein ...   100   2e-19

>ref|XP_002270438.1| PREDICTED: dynein 8 kDa light chain, flagellar outer arm [Vitis
           vinifera] gi|147857576|emb|CAN81003.1| hypothetical
           protein VITISV_006994 [Vitis vinifera]
          Length = 117

 Score =  105 bits (262), Expect = 4e-21
 Identities = 57/89 (64%), Positives = 63/89 (70%), Gaps = 10/89 (11%)
 Frame = -1

Query: 238 MSEESKRNG----------DHRNSSAATSSPSADKKVIIKSADMKDDLQTEAIHIAIQAF 89
           M+E+ KRNG          D R  S A S   A K+VIIKSADMKDD+Q EAI IAI A 
Sbjct: 1   MAEDLKRNGALALSLKQSSDDRKLSLAAS---ASKRVIIKSADMKDDMQKEAIDIAIAAS 57

Query: 88  EKHGVEKDVAEYIKKEFDKKHGPTWHCIV 2
           E H VEK++AEYIKKEFDKKHGPTWHCIV
Sbjct: 58  ENHSVEKNIAEYIKKEFDKKHGPTWHCIV 86


>ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1|
           unknown [Populus trichocarpa]
           gi|222838609|gb|EEE76974.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/86 (61%), Positives = 67/86 (77%)
 Frame = -1

Query: 259 KKSSTAMMSEESKRNGDHRNSSAATSSPSADKKVIIKSADMKDDLQTEAIHIAIQAFEKH 80
           K+S T  +  E+  +  +R SS A ++P   KK+IIK+ADMKDD+Q EA+ IAI AFE++
Sbjct: 7   KRSITGGVKVEN--DSYYRKSSPAAAAPPG-KKIIIKNADMKDDMQKEAVDIAIAAFERN 63

Query: 79  GVEKDVAEYIKKEFDKKHGPTWHCIV 2
            VEKDVAE+IKKEFDKKHGPTWHCIV
Sbjct: 64  NVEKDVAEHIKKEFDKKHGPTWHCIV 89


>ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thaliana]
           gi|28466885|gb|AAO44051.1| At4g15930 [Arabidopsis
           thaliana] gi|332658267|gb|AEE83667.1| dynein light chain
           LC8-type [Arabidopsis thaliana]
          Length = 123

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/72 (69%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
 Frame = -1

Query: 211 DHRNSSA--ATSSPSADKKVIIKSADMKDDLQTEAIHIAIQAFEKHGVEKDVAEYIKKEF 38
           D R SS     +SP A K+ +IKSADMKDD+Q EAI IAI AFEK+ VEKD+AE IKKEF
Sbjct: 21  DDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAISAFEKYSVEKDIAENIKKEF 80

Query: 37  DKKHGPTWHCIV 2
           DKKHG TWHCIV
Sbjct: 81  DKKHGATWHCIV 92


>ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]
           gi|297316035|gb|EFH46458.1| At4g15930 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 123

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/72 (69%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
 Frame = -1

Query: 211 DHRNSSA--ATSSPSADKKVIIKSADMKDDLQTEAIHIAIQAFEKHGVEKDVAEYIKKEF 38
           D R SS     +SP A K+ +IKSADMKDD+Q EAI IAI AFEK+ VEKD+AE IKKEF
Sbjct: 21  DDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIDIAISAFEKYSVEKDIAENIKKEF 80

Query: 37  DKKHGPTWHCIV 2
           DKKHG TWHCIV
Sbjct: 81  DKKHGATWHCIV 92


>gb|AAL57365.1|AF404866_1 neuronal nitric oxide synthase protein inhibitor [Arabidopsis
           thaliana]
          Length = 103

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = -1

Query: 184 SSPSADKKVIIKSADMKDDLQTEAIHIAIQAFEKHGVEKDVAEYIKKEFDKKHGPTWHCI 5
           +SP A K+ +IKSADMKDD+Q EAI IAI AFEK+ VEKD+AE IKKEFDKKHG TWHCI
Sbjct: 12  ASPPAGKRAVIKSADMKDDMQKEAIEIAISAFEKYSVEKDIAENIKKEFDKKHGATWHCI 71

Query: 4   V 2
           V
Sbjct: 72  V 72


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