BLASTX nr result

ID: Bupleurum21_contig00023839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023839
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316055.1| f-box family protein [Populus trichocarpa] g...    70   1e-10
ref|XP_003594683.1| F-box protein [Medicago truncatula] gi|21707...    70   2e-10
gb|ACJ84251.1| unknown [Medicago truncatula]                           70   2e-10
ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vit...    69   3e-10
ref|XP_002519272.1| conserved hypothetical protein [Ricinus comm...    69   4e-10

>ref|XP_002316055.1| f-box family protein [Populus trichocarpa]
           gi|222865095|gb|EEF02226.1| f-box family protein
           [Populus trichocarpa]
          Length = 359

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = +1

Query: 304 NLKFGAFPDEIIHKILVKLPIKALFRAKCVCKLWYDLVSDRYFIQMYN 447
           N + G  PDE+I ++L +LP+K+LFRAK VCKLWY L SD+YF+Q+YN
Sbjct: 2   NSRDGFLPDEVIIQVLARLPVKSLFRAKTVCKLWYKLSSDKYFVQLYN 49


>ref|XP_003594683.1| F-box protein [Medicago truncatula] gi|217074110|gb|ACJ85415.1|
           unknown [Medicago truncatula]
           gi|355483731|gb|AES64934.1| F-box protein [Medicago
           truncatula]
          Length = 361

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = +1

Query: 316 GAFPDEIIHKILVKLPIKALFRAKCVCKLWYDLVSDRYFIQMYN 447
           G FPDE++ +IL +LP+K+LFR+K VCKLWY L  D+YFIQ+YN
Sbjct: 7   GIFPDEVVMQILARLPVKSLFRSKTVCKLWYRLTLDKYFIQLYN 50


>gb|ACJ84251.1| unknown [Medicago truncatula]
          Length = 361

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = +1

Query: 316 GAFPDEIIHKILVKLPIKALFRAKCVCKLWYDLVSDRYFIQMYN 447
           G FPDE++ +IL +LP+K+LFR+K VCKLWY L  D+YFIQ+YN
Sbjct: 7   GIFPDEVVMQILARLPVKSLFRSKTVCKLWYRLTLDKYFIQLYN 50


>ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vitis vinifera]
          Length = 357

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 26/44 (59%), Positives = 38/44 (86%)
 Frame = +1

Query: 316 GAFPDEIIHKILVKLPIKALFRAKCVCKLWYDLVSDRYFIQMYN 447
           G FP+E+I +IL +LP+K++FR+KCVC LWY L SD+YF+++YN
Sbjct: 4   GVFPEEVILQILARLPVKSVFRSKCVCTLWYKLCSDKYFVRLYN 47


>ref|XP_002519272.1| conserved hypothetical protein [Ricinus communis]
           gi|223541587|gb|EEF43136.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = +1

Query: 304 NLKFGAFPDEIIHKILVKLPIKALFRAKCVCKLWYDLVSDRYFIQMYN 447
           N + G  PDEI+ +IL +LP+K+LFRAK VCKLWY L  D+YFIQ+YN
Sbjct: 2   NSRNGILPDEIVLQILARLPVKSLFRAKTVCKLWYRLSLDKYFIQLYN 49


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