BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023831
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|2...   330   2e-88
ref|NP_180390.2| TATA-binding related factor (TRF) of subunit 20...   328   8e-88
ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II tra...   327   2e-87
ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymera...   327   2e-87
ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arab...   325   9e-87

>ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|222833473|gb|EEE71950.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  330 bits (846), Expect = 2e-88
 Identities = 157/216 (72%), Positives = 188/216 (87%), Gaps = 2/216 (0%)
 Frame = -3

Query: 791 VLHWQPNAGTTVNSQILSEVCQCAESINGVKGGRWKATLNFYRPMLKEQANPLEFPRDFL 612
           VLHWQPNAGTTVN+QIL+EV QC ESINGVK GRWKAT+ +Y+P+L++Q+   E PRDFL
Sbjct: 6   VLHWQPNAGTTVNTQILNEVTQCVESINGVKEGRWKATVTYYKPILRDQSQAPELPRDFL 65

Query: 611 GISLQEQPSKYYFVIRGQRLVLEADSNIQIIMEKLQSYKSRVALNFEGFQYQLGDFQLRV 432
           GISL EQP+KYYF+IRGQR+VLEADS+IQ IMEKLQSYKSRVAL FEGFQYQLGDFQLRV
Sbjct: 66  GISLPEQPNKYYFIIRGQRIVLEADSSIQTIMEKLQSYKSRVALYFEGFQYQLGDFQLRV 125

Query: 431 GKVVTVHSESLRGIVMEMDYLPISSYEKSQQIMAEFYDIWQEALQKRSLPGHFVRIEPNF 252
           GKV   HS++LRGI+ME++YLP+SS +KS+Q+M EF DIWQEA+ KRSLPGHF+ +EPNF
Sbjct: 126 GKVTPTHSDNLRGIIMEVEYLPLSSIDKSRQVMEEFVDIWQEAISKRSLPGHFMHMEPNF 185

Query: 251 GEFGLADQYTSSHTAVQYASIMLQMIATS--QQIRN 150
            E+GL+D Y+S HTAVQYA++M Q+IAT   Q  RN
Sbjct: 186 VEYGLSDHYSSQHTAVQYATVMAQLIATQSVQAARN 221


>ref|NP_180390.2| TATA-binding related factor (TRF) of subunit 20 of Mediator complex
           [Arabidopsis thaliana]
           gi|75127115|sp|Q6NPF4.1|MD20A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           20a gi|38454106|gb|AAR20747.1| At2g28230 [Arabidopsis
           thaliana] gi|38604010|gb|AAR24748.1| At2g28230
           [Arabidopsis thaliana] gi|330252999|gb|AEC08093.1|
           TATA-binding related factor (TRF) of subunit 20 of
           Mediator complex [Arabidopsis thaliana]
          Length = 219

 Score =  328 bits (841), Expect = 8e-88
 Identities = 158/213 (74%), Positives = 185/213 (86%)
 Frame = -3

Query: 791 VLHWQPNAGTTVNSQILSEVCQCAESINGVKGGRWKATLNFYRPMLKEQANPLEFPRDFL 612
           VLHWQPN G+TV+SQIL+E  QC ESINGVK GRWKATLN+Y+PMLK+QAN LEFPRDFL
Sbjct: 6   VLHWQPNQGSTVSSQILNEATQCVESINGVKEGRWKATLNYYKPMLKDQANQLEFPRDFL 65

Query: 611 GISLQEQPSKYYFVIRGQRLVLEADSNIQIIMEKLQSYKSRVALNFEGFQYQLGDFQLRV 432
           GISL +QP+KYYF+IR QR+VLEADS+IQ+IMEKLQSYKS+VAL F+GFQYQLGDF+LRV
Sbjct: 66  GISLADQPNKYYFIIRTQRIVLEADSSIQLIMEKLQSYKSKVALYFDGFQYQLGDFRLRV 125

Query: 431 GKVVTVHSESLRGIVMEMDYLPISSYEKSQQIMAEFYDIWQEALQKRSLPGHFVRIEPNF 252
           GKVV  HSE++RGIVME++YLPISS EK+Q++M EF +IW EAL KRSLPG FV I+ NF
Sbjct: 126 GKVVPTHSENVRGIVMEVEYLPISSMEKAQKVMEEFLEIWNEALAKRSLPGKFVNIDLNF 185

Query: 251 GEFGLADQYTSSHTAVQYASIMLQMIATSQQIR 153
           GEFGL D YT  HTAV+YA +M  MIAT Q +R
Sbjct: 186 GEFGLGDIYTPQHTAVRYALVMAHMIATVQAVR 218


>ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Cucumis sativus]
           gi|449488087|ref|XP_004157936.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 20a-like
           [Cucumis sativus]
          Length = 223

 Score =  327 bits (837), Expect = 2e-87
 Identities = 157/215 (73%), Positives = 187/215 (86%), Gaps = 1/215 (0%)
 Frame = -3

Query: 791 VLHWQPNAGTTVNSQILSEVCQCAESINGVKGGRWKATLNFYRPMLKEQANPL-EFPRDF 615
           VLHWQPNAG+TVNSQIL+EV QC ESI+GVKGG+WKATL FY+P+L++Q +P  EFPRDF
Sbjct: 6   VLHWQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNSPAAEFPRDF 65

Query: 614 LGISLQEQPSKYYFVIRGQRLVLEADSNIQIIMEKLQSYKSRVALNFEGFQYQLGDFQLR 435
           LGISL EQP+KYY +IRGQR+VLEAD  IQ IMEKLQSYK RVALNFEGFQYQLGDFQLR
Sbjct: 66  LGISLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLR 125

Query: 434 VGKVVTVHSESLRGIVMEMDYLPISSYEKSQQIMAEFYDIWQEALQKRSLPGHFVRIEPN 255
           VGKVV  +SE+LRGIVME++YLPISS EKS+Q+M EF+D+WQEA+ K SLPG F+ IE N
Sbjct: 126 VGKVVPNNSENLRGIVMEIEYLPISSMEKSRQVMEEFFDVWQEAMSKSSLPGRFMHIESN 185

Query: 254 FGEFGLADQYTSSHTAVQYASIMLQMIATSQQIRN 150
           F E+GL+D YTS HTAVQY ++M Q+IAT Q +++
Sbjct: 186 FAEYGLSDYYTSQHTAVQYGNVMAQLIATVQAVQS 220


>ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 20-like [Vitis vinifera]
          Length = 222

 Score =  327 bits (837), Expect = 2e-87
 Identities = 156/217 (71%), Positives = 187/217 (86%), Gaps = 3/217 (1%)
 Frame = -3

Query: 791 VLHWQPNAGTTVNSQILSEVCQCAESINGVKGGRWKATLNFYRPMLKEQANPLEFPRDFL 612
           V HWQPNAGTTVNSQ+++EV QC ESINGVK GRWKATL FY+PM ++QA P E+PRDFL
Sbjct: 6   VFHWQPNAGTTVNSQMINEVSQCVESINGVKEGRWKATLTFYKPMFRDQAVPAEYPRDFL 65

Query: 611 GISLQEQPSKYYFVIRGQRLVLEADSNIQIIMEKLQSYKSRVALNFEGFQYQLGDFQLRV 432
           GISL EQP++YYF+IR Q++VLEADS+IQ+IMEKLQSYKSRV+L FEGFQYQLGDFQLRV
Sbjct: 66  GISLPEQPNRYYFIIRSQKIVLEADSSIQMIMEKLQSYKSRVSLTFEGFQYQLGDFQLRV 125

Query: 431 GKVVTVHSESLRGIVMEMDYLPISSYEKSQQIMAEFYDIWQEALQKRSLPGHFVRIEPNF 252
           GKV    SE+LRGIV E++YLP+SS EKS+QI+  F +IWQEA+ KRSLPGHF+ IEPNF
Sbjct: 126 GKVAPSASENLRGIVFEVEYLPLSSMEKSRQILDGFVEIWQEAMSKRSLPGHFMHIEPNF 185

Query: 251 GEFGLADQYTSSHTAVQYASIMLQMIA---TSQQIRN 150
            EFGL+D YTS HTAVQYA++M Q+I+   T+Q +RN
Sbjct: 186 AEFGLSDHYTSQHTAVQYATVMAQLISAVQTAQGVRN 222


>ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arabidopsis lyrata subsp.
           lyrata] gi|297324948|gb|EFH55368.1| hypothetical protein
           ARALYDRAFT_481687 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  325 bits (832), Expect = 9e-87
 Identities = 156/213 (73%), Positives = 184/213 (86%)
 Frame = -3

Query: 791 VLHWQPNAGTTVNSQILSEVCQCAESINGVKGGRWKATLNFYRPMLKEQANPLEFPRDFL 612
           VLHWQPN G+TV+SQIL+EV QC ESINGVK GRWKATLN+Y+PML++QAN  EFPRDFL
Sbjct: 6   VLHWQPNQGSTVSSQILNEVTQCVESINGVKEGRWKATLNYYKPMLRDQANQSEFPRDFL 65

Query: 611 GISLQEQPSKYYFVIRGQRLVLEADSNIQIIMEKLQSYKSRVALNFEGFQYQLGDFQLRV 432
           GISL +QP+KYYF+IR QR+VLEADS+IQ+IMEKLQSYKS+VAL F+GFQYQLGDF+LRV
Sbjct: 66  GISLADQPNKYYFIIRSQRIVLEADSSIQLIMEKLQSYKSKVALYFDGFQYQLGDFRLRV 125

Query: 431 GKVVTVHSESLRGIVMEMDYLPISSYEKSQQIMAEFYDIWQEALQKRSLPGHFVRIEPNF 252
           GKVV  HSE++RGIVME++YLPISS EK+Q++M EF +IW EAL KRSLPG FV I+ NF
Sbjct: 126 GKVVPTHSENVRGIVMEVEYLPISSMEKAQKVMEEFLEIWNEALAKRSLPGKFVNIDLNF 185

Query: 251 GEFGLADQYTSSHTAVQYASIMLQMIATSQQIR 153
            EFGL D YT  HTAV+YA +M  MIAT Q +R
Sbjct: 186 VEFGLGDNYTPQHTAVRYALVMAHMIATVQAVR 218