BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023824
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    97   1e-18
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    92   5e-17
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    91   1e-16
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    87   2e-15
ref|XP_003607468.1| hypothetical protein MTR_4g078340 [Medicago ...    79   6e-13

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 63/166 (37%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
 Frame = +1

Query: 10   SSRWSPPAPGSFKINVDASVRAGADTFAVGMVLRNHDGSFLAG--KTLSMQVPDSVFEAE 183
            SS+W  P  G  KINVD +V    D  A+G V R+H G F+ G  K    Q    V   E
Sbjct: 661  SSKWQKPDYGWIKINVDGAVFP--DKGAIGAVFRDHQGRFMGGFAKPFPHQTLPKV--VE 716

Query: 184  AIGVREALSWITDQGLQDKRVYVESDSLLTVRAIQNKAINYLEVGVVIESCCQKINQLNH 363
            A+GVRE LSWI ++     R+ VE+D L  V+AIQ+K+      G +I  C   +  L  
Sbjct: 717  ALGVREVLSWIHERSRS--RIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVD 774

Query: 364  VSLSFIRRNANKVAHELARCPC-LAYCQVLFTSPPSCVVEAILYDV 498
            V + + RR+AN  AH LA   C      +   +PP C++  + YDV
Sbjct: 775  VQVVYARRSANSAAHCLANGACSFTSLHIWGYTPPQCILSCLHYDV 820


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 54/154 (35%), Positives = 79/154 (51%)
 Frame = +1

Query: 19  WSPPAPGSFKINVDASVRAGADTFAVGMVLRNHDGSFLAGKTLSMQVPDSVFEAEAIGVR 198
           W PPA G  K NVDA++ +  + F  GM +R+  G FL   T   +      EAEA+G+R
Sbjct: 57  WQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLR 116

Query: 199 EALSWITDQGLQDKRVYVESDSLLTVRAIQNKAINYLEVGVVIESCCQKINQLNHVSLSF 378
           +A+ W+    L+   V +E D  L V +I +K  N  E G +I+ C   + Q  +  +SF
Sbjct: 117 DAILWLGQ--LELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISF 174

Query: 379 IRRNANKVAHELARCPCLAYCQVLFTSPPSCVVE 480
           +RR AN VAH  AR         L  + P  ++E
Sbjct: 175 VRRQANVVAHSFARVSIFQPLFGLAFAKPESILE 208


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 57/150 (38%), Positives = 79/150 (52%)
 Frame = +1

Query: 25  PPAPGSFKINVDASVRAGADTFAVGMVLRNHDGSFLAGKTLSMQVPDSVFEAEAIGVREA 204
           PP PG  K NVD +V   +     GMV+R+  GSF+ G   S     +V  AEAIG+REA
Sbjct: 170 PPQPGFVKCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREA 229

Query: 205 LSWITDQGLQDKRVYVESDSLLTVRAIQNKAINYLEVGVVIESCCQKINQLNHVSLSFIR 384
           + W+   G  +  V  E D+ + V A+ + A +  E G VI  C   +    + S+ FIR
Sbjct: 230 VQWVLSLGRSN--VIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIR 287

Query: 385 RNANKVAHELARCPCLAYCQVLFTSPPSCV 474
           + AN VAH LAR   L     +F+ PP C+
Sbjct: 288 KQANLVAHSLARASHLQDGFNMFSVPPDCI 317


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/134 (33%), Positives = 79/134 (58%)
 Frame = +1

Query: 19  WSPPAPGSFKINVDASVRAGADTFAVGMVLRNHDGSFLAGKTLSMQVPDSVFEAEAIGVR 198
           W+ P+ GS K+N+DA++ +  D+  VG V+++H G F+    +S         AE + ++
Sbjct: 28  WNTPSLGSMKVNMDATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQ 87

Query: 199 EALSWITDQGLQDKRVYVESDSLLTVRAIQNKAINYLEVGVVIESCCQKINQLNHVSLSF 378
           EALSW  D+ L +  V  E D L  V A+  K  +   +G++I+ C    + +++ S +F
Sbjct: 88  EALSWARDRQLLN--VVFELDCLHIVEALLRKGTDRSSLGLIIKDCKLLSSSISNCSFAF 145

Query: 379 IRRNANKVAHELAR 420
           ++R+ N+VAH+LAR
Sbjct: 146 VKRSRNEVAHKLAR 159


>ref|XP_003607468.1| hypothetical protein MTR_4g078340 [Medicago truncatula]
           gi|355508523|gb|AES89665.1| hypothetical protein
           MTR_4g078340 [Medicago truncatula]
          Length = 181

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
 Frame = +1

Query: 19  WSPPAPGSFKINVDASVRAGADTFAVGMVLRNHDGSFLAGKTLSMQVPDSVFEAEAIGVR 198
           W P   G +K N+DA+  +  +   +G+ +R+ +G+F+  KT++     SV   EA+G+ 
Sbjct: 22  WQPHVAGRYKCNIDAAFTSHVNCTCIGICVRDAEGTFVLAKTMTYPCTVSVDVGEALGMH 81

Query: 199 EALSWITDQGLQDKRVYVESDSLLTVRAIQNKAINYLEVGVVIESCCQKIN-QLNHVSLS 375
            AL W++D  +Q   V  E+DS LT  A  +   +  E G +I SC    +   ++  + 
Sbjct: 82  SALQWLSD--MQFDNVDFETDSKLTADAFLSTMNDLSEFGCIIFSCRSLFSTSFSNFRVE 139

Query: 376 FIRRNANKVAHELARCPCLAYCQVLFTSPPSCVVEAILYDV 498
           F+R+ AN VAH L R         ++    +C+   I+ ++
Sbjct: 140 FVRQQANVVAHALTRETTSLASPAVYFDISNCIETLIINEM 180