BLASTX nr result

ID: Bupleurum21_contig00023818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023818
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589458.1| Transcription factor bHLH140, partial [Medic...   199   2e-49
ref|XP_002270443.2| PREDICTED: transcription factor bHLH140-like...   193   1e-47
emb|CBI18255.3| unnamed protein product [Vitis vinifera]              193   1e-47
emb|CAN83280.1| hypothetical protein VITISV_005888 [Vitis vinifera]   193   1e-47
ref|XP_003516953.1| PREDICTED: transcription factor bHLH140-like...   192   2e-47

>ref|XP_003589458.1| Transcription factor bHLH140, partial [Medicago truncatula]
           gi|355478506|gb|AES59709.1| Transcription factor
           bHLH140, partial [Medicago truncatula]
          Length = 639

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/125 (79%), Positives = 110/125 (88%), Gaps = 1/125 (0%)
 Frame = -1

Query: 374 ITVILVGAPGSGKSTFCQDVMRIANRSWLRVCQDTIGNGKAGTKVQCLASAATALKEGKS 195
           I VILVGAPGSGKSTFC++VMR ++R+WLRVCQDTIGNGKAG+K QCL+SAA  LK+GKS
Sbjct: 14  ILVILVGAPGSGKSTFCEEVMRSSSRTWLRVCQDTIGNGKAGSKAQCLSSAARGLKDGKS 73

Query: 194 VFIDRCNLERDQRVDFLNL-GSSYGDVHAVVLDLPAKLCISRCSKRTGHEGNLQGGKAAM 18
           VFIDRCNL R+QR DFL L G S  D+HAVVLDLPAKLCISR  KR+GHEGNLQGGKAA 
Sbjct: 74  VFIDRCNLNREQRSDFLKLRGESQIDIHAVVLDLPAKLCISRSVKRSGHEGNLQGGKAAA 133

Query: 17  VVNRM 3
           VVNRM
Sbjct: 134 VVNRM 138


>ref|XP_002270443.2| PREDICTED: transcription factor bHLH140-like [Vitis vinifera]
          Length = 734

 Score =  193 bits (490), Expect = 1e-47
 Identities = 92/124 (74%), Positives = 108/124 (87%)
 Frame = -1

Query: 374 ITVILVGAPGSGKSTFCQDVMRIANRSWLRVCQDTIGNGKAGTKVQCLASAATALKEGKS 195
           I V+L+GAPGSGKSTFC+ V+R + R W+RVCQDTIGNGKAGTK QCL SA +AL++GKS
Sbjct: 17  IVVLLMGAPGSGKSTFCEHVIRSSTRPWVRVCQDTIGNGKAGTKSQCLKSATSALEDGKS 76

Query: 194 VFIDRCNLERDQRVDFLNLGSSYGDVHAVVLDLPAKLCISRCSKRTGHEGNLQGGKAAMV 15
           VFIDRCNL+R+QR +F+ LGS   ++HAVVLDLPA+LCISR  KRTGHEGNLQGGKAA V
Sbjct: 77  VFIDRCNLDREQRAEFVKLGSPQVEMHAVVLDLPAQLCISRSVKRTGHEGNLQGGKAAAV 136

Query: 14  VNRM 3
           VNRM
Sbjct: 137 VNRM 140


>emb|CBI18255.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  193 bits (490), Expect = 1e-47
 Identities = 92/124 (74%), Positives = 108/124 (87%)
 Frame = -1

Query: 374 ITVILVGAPGSGKSTFCQDVMRIANRSWLRVCQDTIGNGKAGTKVQCLASAATALKEGKS 195
           I V+L+GAPGSGKSTFC+ V+R + R W+RVCQDTIGNGKAGTK QCL SA +AL++GKS
Sbjct: 20  IVVLLMGAPGSGKSTFCEHVIRSSTRPWVRVCQDTIGNGKAGTKSQCLKSATSALEDGKS 79

Query: 194 VFIDRCNLERDQRVDFLNLGSSYGDVHAVVLDLPAKLCISRCSKRTGHEGNLQGGKAAMV 15
           VFIDRCNL+R+QR +F+ LGS   ++HAVVLDLPA+LCISR  KRTGHEGNLQGGKAA V
Sbjct: 80  VFIDRCNLDREQRAEFVKLGSPQVEMHAVVLDLPAQLCISRSVKRTGHEGNLQGGKAAAV 139

Query: 14  VNRM 3
           VNRM
Sbjct: 140 VNRM 143


>emb|CAN83280.1| hypothetical protein VITISV_005888 [Vitis vinifera]
          Length = 864

 Score =  193 bits (490), Expect = 1e-47
 Identities = 92/124 (74%), Positives = 108/124 (87%)
 Frame = -1

Query: 374 ITVILVGAPGSGKSTFCQDVMRIANRSWLRVCQDTIGNGKAGTKVQCLASAATALKEGKS 195
           I V+L+GAPGSGKSTFC+ V+R + R W+RVCQDTIGNGKAGTK QCL SA +AL++GKS
Sbjct: 107 IVVLLMGAPGSGKSTFCEHVIRSSTRPWVRVCQDTIGNGKAGTKSQCLKSATSALEDGKS 166

Query: 194 VFIDRCNLERDQRVDFLNLGSSYGDVHAVVLDLPAKLCISRCSKRTGHEGNLQGGKAAMV 15
           VFIDRCNL+R+QR +F+ LGS   ++HAVVLDLPA+LCISR  KRTGHEGNLQGGKAA V
Sbjct: 167 VFIDRCNLDREQRAEFVKLGSPQVEMHAVVLDLPAQLCISRSVKRTGHEGNLQGGKAAAV 226

Query: 14  VNRM 3
           VNRM
Sbjct: 227 VNRM 230


>ref|XP_003516953.1| PREDICTED: transcription factor bHLH140-like [Glycine max]
          Length = 734

 Score =  192 bits (488), Expect = 2e-47
 Identities = 95/125 (76%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
 Frame = -1

Query: 374 ITVILVGAPGSGKSTFCQDVMRIANRSWLRVCQDTIGNGKAGTKVQCLASAATALKEGKS 195
           + VILVGAPGSGKSTFC++VM  + R W+RVCQDTIGNGKAG K QCL+SA  ALK+GKS
Sbjct: 17  VLVILVGAPGSGKSTFCEEVMGSSTRPWVRVCQDTIGNGKAGNKAQCLSSATRALKDGKS 76

Query: 194 VFIDRCNLERDQRVDFLNLGSS-YGDVHAVVLDLPAKLCISRCSKRTGHEGNLQGGKAAM 18
           VFIDRCNL+R+QR +F+ LG     DVHAVVLDLPAKLCISR  KRTGHEGNLQGGKAA 
Sbjct: 77  VFIDRCNLDREQRSEFIKLGDGPQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAA 136

Query: 17  VVNRM 3
           VVNRM
Sbjct: 137 VVNRM 141


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