BLASTX nr result

ID: Bupleurum21_contig00023813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023813
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   134   8e-30
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   132   2e-29
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   132   2e-29
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   132   2e-29
ref|XP_003606875.1| Helicase-like protein [Medicago truncatula] ...   131   5e-29

>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/119 (50%), Positives = 84/119 (70%), Gaps = 3/119 (2%)
 Frame = +1

Query: 1   GLLVKYQAHINIEWCNQGRLIKYMFKYVNKGPDRATLAVERADETVTSESKNNTNLNEVD 180
           GLL+ +QAH+N+EWCN+ R IKY+FKY++KGPDRAT+ +E  D  + + S N T++  VD
Sbjct: 584 GLLLAFQAHLNVEWCNKSRAIKYLFKYLHKGPDRATMVIE--DNVLGNRSTNATHITMVD 641

Query: 181 E---YVACRYLSSAEACWRIFKFPIHYHKPVVMKLVFHLKNEQQVCFRENEPLPTVIDR 348
           E   ++ CRY+S+ EACWRIF F IHY  P VM+L FHL  E  +  R++E +  VI +
Sbjct: 642 EVKTFLDCRYVSACEACWRIFNFDIHYRNPAVMRLSFHLPEEHSITLRDSEQMSDVISK 700


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/119 (50%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
 Frame = +1

Query: 1   GLLVKYQAHINIEWCNQGRLIKYMFKYVNKGPDRATLAVERADETVTSESKNNTNLNEVD 180
           GLL+ +QAH+N+EWCN+ R IKY+FKY++KGPDRA + +E  D  + + S N T++  VD
Sbjct: 584 GLLLAFQAHLNVEWCNKSRAIKYLFKYLHKGPDRAIMVIE--DNVLGNRSTNATHITMVD 641

Query: 181 E---YVACRYLSSAEACWRIFKFPIHYHKPVVMKLVFHLKNEQQVCFRENEPLPTVIDR 348
           E   ++ CRY+S+ EACWRIF F IHY  P VM+L FHL  E  +  R++E L  VI +
Sbjct: 642 EVKTFLDCRYVSACEACWRIFNFDIHYRNPAVMRLSFHLPEEHSITLRDSEQLSDVISK 700


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1531

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/119 (50%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
 Frame = +1

Query: 1   GLLVKYQAHINIEWCNQGRLIKYMFKYVNKGPDRATLAVERADETVTSESKNNTNLNEVD 180
           GLL+ +QAH+N+EWCN+ R IKY+FKY++KGPDRA + +E  D  + + S N T++  VD
Sbjct: 557 GLLLAFQAHLNVEWCNKSRAIKYLFKYLHKGPDRAIMVIE--DNVLGNRSTNATHITMVD 614

Query: 181 E---YVACRYLSSAEACWRIFKFPIHYHKPVVMKLVFHLKNEQQVCFRENEPLPTVIDR 348
           E   ++ CRY+S+ EACWRIF F IHY  P VM+L FHL  E  +  R++E L  VI +
Sbjct: 615 EVKTFLDCRYVSACEACWRIFNFDIHYRNPAVMRLSFHLPEEHSITLRDSEQLSDVISK 673


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/119 (50%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
 Frame = +1

Query: 1   GLLVKYQAHINIEWCNQGRLIKYMFKYVNKGPDRATLAVERADETVTSESKNNTNLNEVD 180
           GLL+ +QAH+N+EWCN+ R IKY+FKY++KGPDRA + +E  D  + + S N T++  VD
Sbjct: 584 GLLLAFQAHLNVEWCNKSRAIKYLFKYLHKGPDRAIMVIE--DNVLGNRSTNATHITMVD 641

Query: 181 E---YVACRYLSSAEACWRIFKFPIHYHKPVVMKLVFHLKNEQQVCFRENEPLPTVIDR 348
           E   ++ CRY+S+ EACWRIF F IHY  P VM+L FHL  E  +  R++E L  VI +
Sbjct: 642 EVKTFLDCRYVSACEACWRIFNFDIHYRNPAVMRLSFHLPEEHSITLRDSEQLSDVISK 700


>ref|XP_003606875.1| Helicase-like protein [Medicago truncatula]
            gi|355507930|gb|AES89072.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1674

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/113 (54%), Positives = 79/113 (69%)
 Frame = +1

Query: 4    LLVKYQAHINIEWCNQGRLIKYMFKYVNKGPDRATLAVERADETVTSESKNNTNLNEVDE 183
            LL+KYQAHIN+EWCNQ   IKY+FKY+NKG DR T AV   D   +S+S  N N +E+ +
Sbjct: 842  LLMKYQAHINMEWCNQSSSIKYLFKYINKGYDRITAAVVSDD---SSQSNVNDNADEIKQ 898

Query: 184  YVACRYLSSAEACWRIFKFPIHYHKPVVMKLVFHLKNEQQVCFRENEPLPTVI 342
            Y+ CRY+S +EACWRIF FPIH  KP V +L +HL  EQ V F + E +  V+
Sbjct: 899  YLDCRYVSPSEACWRIFAFPIHGRKPAVERLFYHLSGEQSVYFNDYEQVDDVL 951


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