BLASTX nr result

ID: Bupleurum21_contig00023781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023781
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
ref|XP_002868338.1| hypothetical protein ARALYDRAFT_493536 [Arab...   204   8e-51
ref|XP_004138937.1| PREDICTED: probable methionine--tRNA ligase-...   202   3e-50
ref|XP_003558495.1| PREDICTED: probable methionyl-tRNA synthetas...   202   3e-50
dbj|BAJ93387.1| predicted protein [Hordeum vulgare subsp. vulgare]    202   3e-50

>ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|222839328|gb|EEE77665.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score =  204 bits (519), Expect = 6e-51
 Identities = 93/123 (75%), Positives = 101/123 (82%)
 Frame = +2

Query: 2   WLSEDTMKQLYCDTCKRFLADRLVEGTCPNEKCNYDSARGDQCEKCSKLLNPTELIDPKC 181
           WLSE+TMKQLYCDTC+RFLADRLVEGTCP E CNYDSARGDQCE C KLLNPTELI+P+C
Sbjct: 131 WLSENTMKQLYCDTCERFLADRLVEGTCPTEGCNYDSARGDQCENCGKLLNPTELINPRC 190

Query: 182 KVCQNTPRIRDTNHXXXXXXXXXXXXXXYINNMSVAGSWTQNAIQATNAWLKEGLRKRCI 361
           K C+NTPRIRDTNH              YI +MSVAGSW+QNAIQ TNAWLKEGL+ RCI
Sbjct: 191 KQCKNTPRIRDTNHLFLELPQLKDKLVSYIESMSVAGSWSQNAIQTTNAWLKEGLKPRCI 250

Query: 362 TRD 370
           TRD
Sbjct: 251 TRD 253


>ref|XP_002868338.1| hypothetical protein ARALYDRAFT_493536 [Arabidopsis lyrata subsp.
           lyrata] gi|297314174|gb|EFH44597.1| hypothetical protein
           ARALYDRAFT_493536 [Arabidopsis lyrata subsp. lyrata]
          Length = 798

 Score =  204 bits (518), Expect = 8e-51
 Identities = 93/123 (75%), Positives = 102/123 (82%)
 Frame = +2

Query: 2   WLSEDTMKQLYCDTCKRFLADRLVEGTCPNEKCNYDSARGDQCEKCSKLLNPTELIDPKC 181
           WLSE+TM+QLYCDTCK+FLADRLVEG+CP E CNYDSARGDQCEKC KLLNPTEL DPKC
Sbjct: 131 WLSENTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLNPTELKDPKC 190

Query: 182 KVCQNTPRIRDTNHXXXXXXXXXXXXXXYINNMSVAGSWTQNAIQATNAWLKEGLRKRCI 361
           KVCQNTPRIRDT+H              YIN  SVAGSW+QNAIQ TNAWL++GLR+RCI
Sbjct: 191 KVCQNTPRIRDTDHLFIELPLLKDRLEKYINETSVAGSWSQNAIQTTNAWLRDGLRQRCI 250

Query: 362 TRD 370
           TRD
Sbjct: 251 TRD 253


>ref|XP_004138937.1| PREDICTED: probable methionine--tRNA ligase-like [Cucumis sativus]
          Length = 804

 Score =  202 bits (513), Expect = 3e-50
 Identities = 93/123 (75%), Positives = 99/123 (80%)
 Frame = +2

Query: 2   WLSEDTMKQLYCDTCKRFLADRLVEGTCPNEKCNYDSARGDQCEKCSKLLNPTELIDPKC 181
           WLSE+TM+QLYCDTC+RFLADRLVEG CP   C YDSARGDQCEKC KLLNPTEL DP+C
Sbjct: 136 WLSENTMQQLYCDTCERFLADRLVEGICPTPGCEYDSARGDQCEKCGKLLNPTELQDPRC 195

Query: 182 KVCQNTPRIRDTNHXXXXXXXXXXXXXXYINNMSVAGSWTQNAIQATNAWLKEGLRKRCI 361
           KVCQ TPRIRDTNH              YIN MSVAGSW+QNAIQATNAWLKEGL+ RCI
Sbjct: 196 KVCQTTPRIRDTNHMFLELPLLREKLEEYINKMSVAGSWSQNAIQATNAWLKEGLKPRCI 255

Query: 362 TRD 370
           TRD
Sbjct: 256 TRD 258


>ref|XP_003558495.1| PREDICTED: probable methionyl-tRNA synthetase-like [Brachypodium
           distachyon]
          Length = 801

 Score =  202 bits (513), Expect = 3e-50
 Identities = 91/123 (73%), Positives = 102/123 (82%)
 Frame = +2

Query: 2   WLSEDTMKQLYCDTCKRFLADRLVEGTCPNEKCNYDSARGDQCEKCSKLLNPTELIDPKC 181
           WL+E+TM+QL+CDTC+RFLADRLVEG CP E CNY++ARGDQCE CSKLLNPTELIDPKC
Sbjct: 131 WLTENTMQQLFCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKC 190

Query: 182 KVCQNTPRIRDTNHXXXXXXXXXXXXXXYINNMSVAGSWTQNAIQATNAWLKEGLRKRCI 361
           KVC+NTPRIRDT+H              YINN SVAG W+QNAIQATNAWLKEGL+ RCI
Sbjct: 191 KVCKNTPRIRDTDHLFLELPLLSDKLVDYINNTSVAGMWSQNAIQATNAWLKEGLKSRCI 250

Query: 362 TRD 370
           TRD
Sbjct: 251 TRD 253


>dbj|BAJ93387.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  202 bits (513), Expect = 3e-50
 Identities = 91/123 (73%), Positives = 102/123 (82%)
 Frame = +2

Query: 2   WLSEDTMKQLYCDTCKRFLADRLVEGTCPNEKCNYDSARGDQCEKCSKLLNPTELIDPKC 181
           WL+E+TM+QLYCDTC+RFLADRLVEG CP E CNY++ARGDQCE CSKLLNPTELIDPKC
Sbjct: 134 WLTENTMQQLYCDTCERFLADRLVEGRCPTEGCNYEAARGDQCENCSKLLNPTELIDPKC 193

Query: 182 KVCQNTPRIRDTNHXXXXXXXXXXXXXXYINNMSVAGSWTQNAIQATNAWLKEGLRKRCI 361
           KVC+N PRIRDT+H              YINN SVAG W+QNAIQATNAWLKEGL++RCI
Sbjct: 194 KVCKNAPRIRDTDHLFLELPLLSDKLVNYINNTSVAGMWSQNAIQATNAWLKEGLKQRCI 253

Query: 362 TRD 370
           TRD
Sbjct: 254 TRD 256


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