BLASTX nr result
ID: Bupleurum21_contig00023770
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00023770
(1499 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R... 656 0.0
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R... 633 0.0
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ... 634 0.0
ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent R... 633 0.0
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2... 627 0.0
>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
[Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
protein product [Vitis vinifera]
Length = 754
Score = 656 bits (1693), Expect(2) = 0.0
Identities = 324/407 (79%), Positives = 366/407 (89%), Gaps = 1/407 (0%)
Frame = -3
Query: 1218 VLKASCIKSRLRVPPVYVLILCPTRELASQISAEANVLLKYHDGIGVQTLVGGTRFKVDQ 1039
VLKA+ RVPP+ VLILCPTRE+ASQI+AEANV+LKYHDGIGVQTL+GGTRFK DQ
Sbjct: 347 VLKATSSNRIQRVPPILVLILCPTREIASQIAAEANVMLKYHDGIGVQTLIGGTRFKFDQ 406
Query: 1038 KHLESDPCQIIVATPGRLLDHIENKSSLSTRLMGLHLLVVDEADHLLDLGFRKDMEKIVD 859
K LESDPCQIIVATPGRLLDHIENK S S RLMGL +LV+DEADHLLDLGFRKDMEKIVD
Sbjct: 407 KRLESDPCQIIVATPGRLLDHIENKGSFSVRLMGLKMLVLDEADHLLDLGFRKDMEKIVD 466
Query: 858 CLPRQRQSLLFSATIPKEVRRISQLVLKREHAYIDTVGLG-LETHAKVNQSYLVLPHEQH 682
CLPRQRQSLLFSAT+PKEVRRISQLVLK+EHA++DTVGLG ETHAKV QSYLV PH+ H
Sbjct: 467 CLPRQRQSLLFSATVPKEVRRISQLVLKKEHAFVDTVGLGNAETHAKVRQSYLVAPHKLH 526
Query: 681 FQMVFYLLKEHISRVVDYKVIIFCTTAMMASLMFTLFRELKLNVRELHSRKPQLYRTRIS 502
FQ+V++LLK+HI +V DYKVI+FCTTAM+ SL+F L +E+K+NVRE+HSRKPQ+YRTRIS
Sbjct: 527 FQIVYHLLKDHILQVPDYKVIVFCTTAMVTSLVFLLLQEMKVNVREIHSRKPQIYRTRIS 586
Query: 501 DEFKESNRLILMTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGRQGKAGEGILL 322
+EF+ES RL+L+TSDVSARG+NYPDVTLVIQ+GIPSDREQYIHRLGRTGR+GK GEGILL
Sbjct: 587 EEFRESKRLVLITSDVSARGINYPDVTLVIQMGIPSDREQYIHRLGRTGREGKEGEGILL 646
Query: 321 VAPWEDYFLDEIKELPLEKMSLPRLDPDMISKVEDSMAKIDSSIKEAAYHAWLGYYNSNR 142
VAPWE+YFLDEIK+LP+EK LP LDPD+ KV SM KID+S+KEAAYHAWLGYYNS R
Sbjct: 647 VAPWEEYFLDEIKDLPIEKFPLPLLDPDLKLKVGASMDKIDTSVKEAAYHAWLGYYNSIR 706
Query: 141 DIGRDKTTLVERATKFCDSIGLPKPPALFRKTALKMGLKDIAGIRIR 1
+ GRDKTTLVE A +FC+SIGL KPP LFRKTALKMGLK I GIRIR
Sbjct: 707 ETGRDKTTLVELANQFCESIGLQKPPLLFRKTALKMGLKGIPGIRIR 753
Score = 133 bits (334), Expect(2) = 0.0
Identities = 67/97 (69%), Positives = 82/97 (84%)
Frame = -1
Query: 1490 DDLSQHVEMIRKEFSKRSSAVVDEKADEEESIMSEKRFDECNVSPLTVKALTSAGYVQMT 1311
DD S+ +E+IR E S+++ A +EK DEE SI+S+KRFDEC VSPLTVKAL+SAGYVQMT
Sbjct: 251 DDFSEQIELIRHELSRKNLAEEEEKGDEE-SILSQKRFDECGVSPLTVKALSSAGYVQMT 309
Query: 1310 KVQEATINACLEGKDALVRAKTGTGKSAAFLF*KLHA 1200
+VQEAT++ CLEGKDALV+AKTGTGKSAAFL + A
Sbjct: 310 RVQEATLDVCLEGKDALVKAKTGTGKSAAFLLPAIEA 346
>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
[Cucumis sativus] gi|449495891|ref|XP_004159976.1|
PREDICTED: putative DEAD-box ATP-dependent RNA helicase
33-like [Cucumis sativus]
Length = 813
Score = 633 bits (1632), Expect(2) = 0.0
Identities = 313/407 (76%), Positives = 359/407 (88%), Gaps = 1/407 (0%)
Frame = -3
Query: 1218 VLKASCIKSRLRVPPVYVLILCPTRELASQISAEANVLLKYHDGIGVQTLVGGTRFKVDQ 1039
VLKA+C S RVPP++VLILCPTRELA QI+AEANVLLKYHDGIGVQTLVGGTRFK DQ
Sbjct: 406 VLKAACSSSNQRVPPIFVLILCPTRELACQIAAEANVLLKYHDGIGVQTLVGGTRFKDDQ 465
Query: 1038 KHLESDPCQIIVATPGRLLDHIENKSSLSTRLMGLHLLVVDEADHLLDLGFRKDMEKIVD 859
K LES P QIIVATPGRLLDH+EN+S LS RLMGL +L++DEADHLLDLGFRKD+EKIVD
Sbjct: 466 KRLESFPSQIIVATPGRLLDHVENRSGLSLRLMGLKMLILDEADHLLDLGFRKDIEKIVD 525
Query: 858 CLPRQRQSLLFSATIPKEVRRISQLVLKREHAYIDTVGLG-LETHAKVNQSYLVLPHEQH 682
CLPRQRQSLLFSATIP+EVRRISQLVLKREH +++ VG+G +ET +V QS L+ PH H
Sbjct: 526 CLPRQRQSLLFSATIPREVRRISQLVLKREHVFVNNVGIGCVETPVQVKQSCLIAPHGSH 585
Query: 681 FQMVFYLLKEHISRVVDYKVIIFCTTAMMASLMFTLFRELKLNVRELHSRKPQLYRTRIS 502
FQ+V +LLKEHIS DYKVI+FCTT M+ SL+ LFRE+K+NVRE+HSRKPQLYRTRIS
Sbjct: 586 FQIVCHLLKEHISCTPDYKVIVFCTTGMVTSLLHVLFREMKMNVREMHSRKPQLYRTRIS 645
Query: 501 DEFKESNRLILMTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGRQGKAGEGILL 322
DEFK+S +LIL+TSDVSARGMNYPDVTLV+Q+GIPSDREQYIHRLGRTGR+GK G+GILL
Sbjct: 646 DEFKQSRQLILVTSDVSARGMNYPDVTLVLQLGIPSDREQYIHRLGRTGREGKEGQGILL 705
Query: 321 VAPWEDYFLDEIKELPLEKMSLPRLDPDMISKVEDSMAKIDSSIKEAAYHAWLGYYNSNR 142
+APWE+YFL+E+K+LPLE+ LP+LD + KVE+SMAKID+SIKE AYHAWLGYYNS R
Sbjct: 706 IAPWEEYFLEELKDLPLERRRLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 765
Query: 141 DIGRDKTTLVERATKFCDSIGLPKPPALFRKTALKMGLKDIAGIRIR 1
IGRDKTTLVE +F +SIGL PPALFRKTALKMGLKDI GIR+R
Sbjct: 766 GIGRDKTTLVELGKQFSESIGLQNPPALFRKTALKMGLKDIPGIRVR 812
Score = 115 bits (288), Expect(2) = 0.0
Identities = 57/100 (57%), Positives = 77/100 (77%)
Frame = -1
Query: 1499 ENEDDLSQHVEMIRKEFSKRSSAVVDEKADEEESIMSEKRFDECNVSPLTVKALTSAGYV 1320
+ E D ++ VE++R E SK+S+A +E EE I +EKRFDEC +SPLTVKAL+ +GYV
Sbjct: 307 DEESDFAEQVELLRYELSKKSAAE-EEGEKREEIIFTEKRFDECGISPLTVKALSFSGYV 365
Query: 1319 QMTKVQEATINACLEGKDALVRAKTGTGKSAAFLF*KLHA 1200
+MT+VQEAT++ CLEGKD LV++KTG+GKS AFL + A
Sbjct: 366 RMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAIEA 405
>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 771
Score = 634 bits (1634), Expect(2) = 0.0
Identities = 310/407 (76%), Positives = 360/407 (88%), Gaps = 1/407 (0%)
Frame = -3
Query: 1218 VLKASCIKSRLRVPPVYVLILCPTRELASQISAEANVLLKYHDGIGVQTLVGGTRFKVDQ 1039
VLKA + RV P+YVLILCPTRELASQI+AEAN +LKYHDGI VQTLVGGTRFK DQ
Sbjct: 364 VLKAKSSNVKPRVSPIYVLILCPTRELASQIAAEANAMLKYHDGISVQTLVGGTRFKDDQ 423
Query: 1038 KHLESDPCQIIVATPGRLLDHIENKSSLSTRLMGLHLLVVDEADHLLDLGFRKDMEKIVD 859
K LE +PCQIIVATPGRLLDHIENK LS LMGL +L++DEADHLLDLGFRKD+EKI+D
Sbjct: 424 KRLEMNPCQIIVATPGRLLDHIENKGGLSVHLMGLKMLILDEADHLLDLGFRKDVEKIID 483
Query: 858 CLPRQRQSLLFSATIPKEVRRISQLVLKREHAYIDTVGLG-LETHAKVNQSYLVLPHEQH 682
CLPR+R SL+FSATIPKEVRRISQLVLKREHA+IDTVGLG +ET +KV Q +V+PHE H
Sbjct: 484 CLPRERHSLMFSATIPKEVRRISQLVLKREHAFIDTVGLGSVETPSKVKQFSVVVPHELH 543
Query: 681 FQMVFYLLKEHISRVVDYKVIIFCTTAMMASLMFTLFRELKLNVRELHSRKPQLYRTRIS 502
FQ+V + LKEHI + DYKVI+FCTT M+ SLM+TL RE+K+NV+E+HSRKPQLYRTR+S
Sbjct: 544 FQVVHHFLKEHILQTPDYKVIVFCTTGMVTSLMYTLLREMKMNVKEIHSRKPQLYRTRVS 603
Query: 501 DEFKESNRLILMTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGRQGKAGEGILL 322
DEF+ES R IL++SDVSARGMNYPDVTLVIQVG+P+DREQYIHRLGRTGR+GK GEGILL
Sbjct: 604 DEFRESRRSILVSSDVSARGMNYPDVTLVIQVGLPTDREQYIHRLGRTGREGKDGEGILL 663
Query: 321 VAPWEDYFLDEIKELPLEKMSLPRLDPDMISKVEDSMAKIDSSIKEAAYHAWLGYYNSNR 142
+APWE+YFLDE+++LPL+K+ +P +DP+ KVEDSM+KIDSS+KEAAYHAWLGYYNS R
Sbjct: 664 LAPWEEYFLDELEDLPLDKLPIPDIDPETKLKVEDSMSKIDSSVKEAAYHAWLGYYNSIR 723
Query: 141 DIGRDKTTLVERATKFCDSIGLPKPPALFRKTALKMGLKDIAGIRIR 1
IGRDKTTLVE A +FC+SIGL +PP LFRKTALKMGLK+I GIRIR
Sbjct: 724 KIGRDKTTLVELANRFCESIGLQRPPPLFRKTALKMGLKNIPGIRIR 770
Score = 114 bits (285), Expect(2) = 0.0
Identities = 54/71 (76%), Positives = 65/71 (91%)
Frame = -1
Query: 1412 DEEESIMSEKRFDECNVSPLTVKALTSAGYVQMTKVQEATINACLEGKDALVRAKTGTGK 1233
DE+ESI+ ++RFDEC +SPLTVKALT+AGYVQMT+VQEAT++ACLEGKDALV+AKTGTGK
Sbjct: 293 DEQESILGQRRFDECGISPLTVKALTTAGYVQMTRVQEATLSACLEGKDALVKAKTGTGK 352
Query: 1232 SAAFLF*KLHA 1200
SAAFL + A
Sbjct: 353 SAAFLLPAIEA 363
>ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
[Glycine max]
Length = 707
Score = 633 bits (1633), Expect(2) = 0.0
Identities = 310/407 (76%), Positives = 357/407 (87%), Gaps = 1/407 (0%)
Frame = -3
Query: 1218 VLKASCIKSRLRVPPVYVLILCPTRELASQISAEANVLLKYHDGIGVQTLVGGTRFKVDQ 1039
VLKA + RVPP+YVLILCPTRELASQI+A A VLLKYH+ IGVQTLVGG RFKVDQ
Sbjct: 300 VLKAMSSNTSQRVPPIYVLILCPTRELASQIAAVAKVLLKYHETIGVQTLVGGIRFKVDQ 359
Query: 1038 KHLESDPCQIIVATPGRLLDHIENKSSLSTRLMGLHLLVVDEADHLLDLGFRKDMEKIVD 859
K LESDPCQI+VATPGRLLDHIENKS +S RLMGL +LV+DEADHLLDLGFRKD+EKIVD
Sbjct: 360 KRLESDPCQILVATPGRLLDHIENKSGISLRLMGLRMLVLDEADHLLDLGFRKDVEKIVD 419
Query: 858 CLPRQRQSLLFSATIPKEVRRISQLVLKREHAYIDTVGLG-LETHAKVNQSYLVLPHEQH 682
CLPRQRQSLLFSAT+PKEVRR+SQLVLKREH Y+DTVG+G +ET KV QSYL+ PHE H
Sbjct: 420 CLPRQRQSLLFSATMPKEVRRVSQLVLKREHKYVDTVGMGCVETPVKVKQSYLIAPHESH 479
Query: 681 FQMVFYLLKEHISRVVDYKVIIFCTTAMMASLMFTLFRELKLNVRELHSRKPQLYRTRIS 502
FQ+V +LKEHI + DYKVI+FC T M+ SLM+ L RE+K+NVRE+HSRKPQLYRTRIS
Sbjct: 480 FQLVHQILKEHILQTPDYKVIVFCVTGMVTSLMYNLLREMKMNVREIHSRKPQLYRTRIS 539
Query: 501 DEFKESNRLILMTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGRQGKAGEGILL 322
DEF+ES +LIL++SDVS+RGMNYPDVTLVIQVGIPSDREQYIHRLGRTGR+ K GEG+LL
Sbjct: 540 DEFRESKQLILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREDKEGEGVLL 599
Query: 321 VAPWEDYFLDEIKELPLEKMSLPRLDPDMISKVEDSMAKIDSSIKEAAYHAWLGYYNSNR 142
+APWE+YFLDEIK+LPL+ LP ++P K+E+SMAKID+ IKEAAYHAWLGYYNS R
Sbjct: 600 IAPWEEYFLDEIKDLPLQNFPLPDINPHTKLKIENSMAKIDNDIKEAAYHAWLGYYNSIR 659
Query: 141 DIGRDKTTLVERATKFCDSIGLPKPPALFRKTALKMGLKDIAGIRIR 1
+IGR+KTT+ E A +F +SIGL +PPALFRKTA+KMGLKDI GIRIR
Sbjct: 660 EIGREKTTMAELANRFSESIGLQRPPALFRKTAIKMGLKDIPGIRIR 706
Score = 110 bits (276), Expect(2) = 0.0
Identities = 56/93 (60%), Positives = 71/93 (76%), Gaps = 5/93 (5%)
Frame = -1
Query: 1481 SQHVEMIRKEFSKRSSAVVDEKADEE-----ESIMSEKRFDECNVSPLTVKALTSAGYVQ 1317
S VE IR + +KR + ++E+ +E ESI+S RFDEC +SPLTVKAL+SAGYVQ
Sbjct: 201 SPEVEFIRYQLNKRKLSQIEEQQSQEQQQSNESILSNTRFDECGISPLTVKALSSAGYVQ 260
Query: 1316 MTKVQEATINACLEGKDALVRAKTGTGKSAAFL 1218
MT++QEA++ CLEG DALV+AKTGTGKS AFL
Sbjct: 261 MTRIQEASLPICLEGMDALVKAKTGTGKSVAFL 293
>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
predicted protein [Populus trichocarpa]
Length = 798
Score = 627 bits (1617), Expect(2) = 0.0
Identities = 311/407 (76%), Positives = 358/407 (87%), Gaps = 1/407 (0%)
Frame = -3
Query: 1218 VLKASCIKSRLRVPPVYVLILCPTRELASQISAEANVLLKYHDGIGVQTLVGGTRFKVDQ 1039
VLKA+ + +V P+Y LILCPTRELASQI+AEAN +LKYHDGIGV TLVGGTRFK DQ
Sbjct: 391 VLKATSSNDKPQVSPIYALILCPTRELASQIAAEANAMLKYHDGIGVLTLVGGTRFKDDQ 450
Query: 1038 KHLESDPCQIIVATPGRLLDHIENKSSLSTRLMGLHLLVVDEADHLLDLGFRKDMEKIVD 859
+ LESDP QIIVATPGRLLDHIENK LS LMGL +L++DEADHLLDLGFRKDMEKI+D
Sbjct: 451 RRLESDPYQIIVATPGRLLDHIENKGGLSVHLMGLKVLILDEADHLLDLGFRKDMEKILD 510
Query: 858 CLPRQRQSLLFSATIPKEVRRISQLVLKREHAYIDTVGLG-LETHAKVNQSYLVLPHEQH 682
CLPRQRQSLLFSATIPKEVRRISQLVLKREHA+I+TVG+G +ET AK+ QS+LV PH H
Sbjct: 511 CLPRQRQSLLFSATIPKEVRRISQLVLKREHAFINTVGVGCVETPAKIKQSFLVSPHRLH 570
Query: 681 FQMVFYLLKEHISRVVDYKVIIFCTTAMMASLMFTLFRELKLNVRELHSRKPQLYRTRIS 502
FQ+V +LLKEHI + DYKVI+FCTT M+ SLM+ L RE+ +NVRE+HSRKPQLYRTR+S
Sbjct: 571 FQVVHHLLKEHILQAPDYKVIVFCTTGMVTSLMYLLLREMNMNVREMHSRKPQLYRTRVS 630
Query: 501 DEFKESNRLILMTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGRQGKAGEGILL 322
+EF+ES RLIL+TSDVSARGMNYPDVTLVIQVGIP DRE YIHRLGRTGR+GK GEGILL
Sbjct: 631 NEFRESKRLILVTSDVSARGMNYPDVTLVIQVGIPYDREHYIHRLGRTGREGKDGEGILL 690
Query: 321 VAPWEDYFLDEIKELPLEKMSLPRLDPDMISKVEDSMAKIDSSIKEAAYHAWLGYYNSNR 142
+APWE+YFL+E+K+LPLEK LP++D + K+E+SM+KIDSS+KE AYHAWLGYYNS R
Sbjct: 691 LAPWEEYFLNELKDLPLEKFPLPQIDSETNFKMEESMSKIDSSVKEGAYHAWLGYYNSIR 750
Query: 141 DIGRDKTTLVERATKFCDSIGLPKPPALFRKTALKMGLKDIAGIRIR 1
+IGRDKTTLVE A +F +SIGL KPP+LFRKTALKMGLKDI GIRIR
Sbjct: 751 EIGRDKTTLVELANQFSESIGLHKPPSLFRKTALKMGLKDIPGIRIR 797
Score = 115 bits (289), Expect(2) = 0.0
Identities = 60/101 (59%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Frame = -1
Query: 1496 NEDDLSQHVEMIRKEFSKRSSAVVDE-KADEEESIMSEKRFDECNVSPLTVKALTSAGYV 1320
+++D + VE+IR E ++ +E +EE+SI+SEKRFDEC +SPLTVKAL +AGYV
Sbjct: 290 DKNDFANEVELIRYELGRKKKFAGNEGDKEEEDSILSEKRFDECGLSPLTVKALIAAGYV 349
Query: 1319 QMTKVQEATINACLE-GKDALVRAKTGTGKSAAFLF*KLHA 1200
QMT+VQEAT++ CLE GKDA+V+AKTGTGKSAAFL + A
Sbjct: 350 QMTRVQEATLSVCLEAGKDAMVKAKTGTGKSAAFLLPAIEA 390