BLASTX nr result

ID: Bupleurum21_contig00023758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023758
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251...    95   7e-18
emb|CBI38298.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...    95   7e-18
ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago ...    93   3e-17
ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...    87   1e-15

>ref|XP_002274797.2| PREDICTED: uncharacterized protein LOC100251197 [Vitis vinifera]
          Length = 194

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/55 (80%), Positives = 52/55 (94%)
 Frame = -2

Query: 278 GMQLDQLIQSTSYSRESSVRIQPFDIDVLKEAFQLKETGPIDLPTSEKGTPTIAG 114
           GMQLDQLIQ+TSYSR+++VRIQPFD+DVL+EAFQL+ET PIDLP +EKG PTIAG
Sbjct: 40  GMQLDQLIQNTSYSRDTNVRIQPFDLDVLREAFQLRETAPIDLPPAEKGIPTIAG 94


>emb|CBI38298.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/55 (80%), Positives = 52/55 (94%)
 Frame = -2

Query: 278 GMQLDQLIQSTSYSRESSVRIQPFDIDVLKEAFQLKETGPIDLPTSEKGTPTIAG 114
           GMQLDQLIQ+TSYSR+++VRIQPFD+DVL+EAFQL+ET PIDLP +EKG PTIAG
Sbjct: 50  GMQLDQLIQNTSYSRDTNVRIQPFDLDVLREAFQLRETAPIDLPPAEKGIPTIAG 104


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/54 (83%), Positives = 51/54 (94%)
 Frame = -2

Query: 278 GMQLDQLIQSTSYSRESSVRIQPFDIDVLKEAFQLKETGPIDLPTSEKGTPTIA 117
           GMQLDQLIQ+TSYSR+S+ RIQPFD+DVL+EAFQLKET PIDLP +EKGTPTIA
Sbjct: 63  GMQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIA 116


>ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago truncatula]
           gi|355503182|gb|AES84385.1| hypothetical protein
           MTR_078s1015 [Medicago truncatula]
          Length = 219

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/55 (76%), Positives = 51/55 (92%)
 Frame = -2

Query: 278 GMQLDQLIQSTSYSRESSVRIQPFDIDVLKEAFQLKETGPIDLPTSEKGTPTIAG 114
           GMQLD+LIQ+TS+SRE+S RIQPFD+D+LKE+FQL+ET PIDLP +EKG PTIAG
Sbjct: 69  GMQLDELIQNTSFSRETSARIQPFDLDILKESFQLRETAPIDLPAAEKGIPTIAG 123


>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = -2

Query: 278 GMQLDQLIQSTSYSRESSVRIQPFDIDVLKEAFQLKETGPIDLPTSEKGTPTIAG 114
           GMQL+QLIQ+TSY RE++ RIQPFD D+L EAFQL+ETGP+DLP++EKG PTI G
Sbjct: 63  GMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPG 117


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