BLASTX nr result
ID: Bupleurum21_contig00023753
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00023753 (938 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi... 348 8e-94 ref|XP_002527978.1| pentatricopeptide repeat-containing protein,... 333 3e-89 ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi... 317 2e-84 ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containi... 316 6e-84 ref|NP_568460.1| pentatricopeptide repeat-containing protein [Ar... 304 2e-80 >ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830-like [Vitis vinifera] Length = 580 Score = 348 bits (894), Expect = 8e-94 Identities = 164/312 (52%), Positives = 228/312 (73%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 +HALCKKGLL +A +LL++IL+D+ +TSD+ITSTI MDGC K GD+ +AL W+EM Q Sbjct: 243 IHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQ 302 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVE 360 R + +DVV YNV+I G + AYR+ EM+K+GL PD+FT+NTL+S CK G E Sbjct: 303 RGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDE 362 Query: 361 ACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIID 540 ACY++ VMS MG PD+ISY++++Q LC++ ++ A ++L ML + ++P+ IWN +ID Sbjct: 363 ACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVID 422 Query: 541 GYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYP 720 G+GR+G + A IRDQMV++G+ PN+FTYNALI+A G +VDA+++K EM++NG+YP Sbjct: 423 GHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYP 482 Query: 721 DVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYCLIGKVASAEKLF 900 DVVTYN+LIGAAC EM R+GY PDIITYT+LI+G+C+ G V AE+L Sbjct: 483 DVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELL 542 Query: 901 DKILKSGLVIDH 936 K+ +SGL IDH Sbjct: 543 AKLQRSGLSIDH 554 Score = 125 bits (313), Expect = 2e-26 Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 3/267 (1%) Frame = +1 Query: 136 GDISRALAIWNEMPQRHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTF 315 G + AL + N+M Q+ DV+T+N ++ G + + A V EM + G P+ TF Sbjct: 145 GKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATF 204 Query: 316 NTLVSLLCKEGKTVEACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLG 495 NT + C +A Y++S M+N G+ P+ ++Y +L+ +LC + A++ L ++L Sbjct: 205 NTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILD 264 Query: 496 DHV---LPDSYIWNAIIDGYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGK 666 D D +DG + G + QA D+M+ G ++ YN LI+ Sbjct: 265 DDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQD 324 Query: 667 LVDAYNLKTEMIVNGVYPDVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQ 846 + AY EM G+ PD+ TYN LI C+ M + G PD+I+Y Sbjct: 325 MNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKM 384 Query: 847 LIKGYCLIGKVASAEKLFDKILKSGLV 927 +I+G C+ G V A + +L++ +V Sbjct: 385 IIQGLCIHGDVIRANQFLVCMLENLMV 411 Score = 95.9 bits (237), Expect = 1e-17 Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 3/207 (1%) Frame = +1 Query: 322 LVSLLCKEGKTVEACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDH 501 ++ LC EGK A ++ + M GV PD++++ L+ LC +++ A + ML Sbjct: 137 MIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIG 196 Query: 502 VLPDSYIWNAIIDGYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAY 681 P+ +N I GY V +A + M G+ PN TYN LI+AL +G L DA Sbjct: 197 PSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDAR 256 Query: 682 NLKTEMIVNGV---YPDVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLI 852 L +++ + D++T I + + EM ++G D++ Y LI Sbjct: 257 KLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLI 316 Query: 853 KGYCLIGKVASAEKLFDKILKSGLVID 933 G+CLI + SA + F ++ K GL+ D Sbjct: 317 HGFCLIQDMNSAYRYFCEMFKRGLLPD 343 Score = 92.8 bits (229), Expect = 1e-16 Identities = 63/254 (24%), Positives = 116/254 (45%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 +H C + A R E+ + L D+ T L+ G K G++ A I M + Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGL---LPDIFTYNTLISGFCKIGNLDEACYIHGVMSK 372 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVE 360 +A D+++Y ++I+G + A +F+ M + + P+ +N ++ + G Sbjct: 373 MGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSN 432 Query: 361 ACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIID 540 A + M + G+ P++ +Y L+ + NI A ML + + PD +N +I Sbjct: 433 ALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIG 492 Query: 541 GYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYP 720 +G + A R+ D+M+ G P+I TY LI +G +++A L ++ +G+ Sbjct: 493 AACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSI 552 Query: 721 DVVTYNILIGAACR 762 D + ILI CR Sbjct: 553 DHAPFQILIQKYCR 566 Score = 64.7 bits (156), Expect = 3e-08 Identities = 36/97 (37%), Positives = 49/97 (50%) Frame = +1 Query: 634 ALINALACQGKLVDAYNLKTEMIVNGVYPDVVTYNILIGAACRXXXXXXXXXXXXEMQRK 813 A+I L +GKL A L+ +MI GV PDV+T+N L+ C+ EM Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195 Query: 814 GYNPDIITYTQLIKGYCLIGKVASAEKLFDKILKSGL 924 G +P+ T+ IKGYCL V A LF + SG+ Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGI 232 >ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223532604|gb|EEF34390.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 621 Score = 333 bits (854), Expect = 3e-89 Identities = 160/312 (51%), Positives = 221/312 (70%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 VHALCK+GLL +A +LL E+L+D +++ + LITSTILMDGC KNGD+ +AL IW M Q Sbjct: 237 VHALCKRGLLEDAKKLLGELLDDNEKARVN-LITSTILMDGCIKNGDMVQALGIWYAMSQ 295 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVE 360 ++ MD V YNV+I G + N LAY + +M K+GL PD+FT+NTL+S LCK GK E Sbjct: 296 NNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYE 355 Query: 361 ACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIID 540 ACY++ VM MGV PD ISY++++Q LC ++ A E+LH ML ++P++++WN IID Sbjct: 356 ACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIID 415 Query: 541 GYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYP 720 G+ R G AF IRDQM+++GV+PN+FTYNALI+A G +VDAY+LK M+ +G++P Sbjct: 416 GFARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFP 475 Query: 721 DVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYCLIGKVASAEKLF 900 DV+TYN+LIG AC EM R G+ PDIITYT+LI+G C+ G + A++LF Sbjct: 476 DVITYNLLIGTACNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMRGNMKEAKELF 535 Query: 901 DKILKSGLVIDH 936 K+ +GL +DH Sbjct: 536 AKLQNTGLTVDH 547 Score = 121 bits (304), Expect = 2e-25 Identities = 96/379 (25%), Positives = 156/379 (41%), Gaps = 72/379 (18%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 V LC G LG A L +++L + D++T L++G +GD+ +A + EM + Sbjct: 132 VRDLCLAGKLGAALWLRRKLLH---KGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLE 188 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLC------- 339 + + T+N I+G N A S M G+ P+ T N LV LC Sbjct: 189 IGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLED 248 Query: 340 ------------------------------KEGKTVEACYVYSVMSNMGVTPDIISYRVL 429 K G V+A ++ MS D ++Y VL Sbjct: 249 AKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVL 308 Query: 430 MQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIIDGYGRYGYVQQAFRIRDQMVAYGV 609 + C+ N+ +A Y ML +LPD + +N +I G + G + +A I D M+ GV Sbjct: 309 IHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGV 368 Query: 610 LPNIFTYNALINALACQGKLV-----------------------------------DAYN 684 P+ +Y +I L +G ++ +A++ Sbjct: 369 APDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFS 428 Query: 685 LKTEMIVNGVYPDVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYC 864 ++ +M+ GV P+V TYN LI A + M G PD+ITY LI C Sbjct: 429 IRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTAC 488 Query: 865 LIGKVASAEKLFDKILKSG 921 G+++ A +L+ ++L+SG Sbjct: 489 NAGRISIAVQLYYEMLRSG 507 Score = 111 bits (277), Expect = 3e-22 Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 2/277 (0%) Frame = +1 Query: 103 STILMDGCFKNGDISRALAIWNEMPQRHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMY 282 ++++ D C G + AL + ++ + D++T+N ++ G S + A + EM Sbjct: 129 ASLVRDLCLA-GKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEML 187 Query: 283 KKGLHPDVFTFNTLVSLLCKEGKTVEACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNID 462 + G P+ TFNT + C +A Y++S MS+ GV P+ ++ +L+ +LC ++ Sbjct: 188 EIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLE 247 Query: 463 IAKEYLHRMLGDH--VLPDSYIWNAIIDGYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNA 636 AK+ L +L D+ + ++DG + G + QA I M L + YN Sbjct: 248 DAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNV 307 Query: 637 LINALACQGKLVDAYNLKTEMIVNGVYPDVVTYNILIGAACRXXXXXXXXXXXXEMQRKG 816 LI+ + AY+ +M+ G+ PD+ TYN LI C+ M R G Sbjct: 308 LIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMG 367 Query: 817 YNPDIITYTQLIKGYCLIGKVASAEKLFDKILKSGLV 927 PD I+Y +I+G C G V A + +L+ +V Sbjct: 368 VAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMV 404 Score = 74.7 bits (182), Expect = 3e-11 Identities = 62/249 (24%), Positives = 105/249 (42%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 + LCK G L EA + +L + D I+ I++ G GD+ +A + M + Sbjct: 344 ISGLCKAGKLYEACYIHDVMLRMGV---APDQISYKIVIQGLCTRGDVLKANEHLHCMLE 400 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVE 360 + + +N++I G +S A+ +M G+ P+VFT+N L+ K G V+ Sbjct: 401 KSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVD 460 Query: 361 ACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIID 540 A + +M G+ PD+I+Y +L+ + C I IA + + ML Sbjct: 461 AYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRS-------------- 506 Query: 541 GYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYP 720 G P+I TY LI L +G + +A L ++ G+ Sbjct: 507 ---------------------GHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLTV 545 Query: 721 DVVTYNILI 747 D V + +LI Sbjct: 546 DHVPFQLLI 554 Score = 57.0 bits (136), Expect = 6e-06 Identities = 32/116 (27%), Positives = 61/116 (52%) Frame = +1 Query: 91 DLITSTILMDGCFKNGDISRALAIWNEMPQRHSAMDVVTYNVMIRGAGFSWNSTLAYRFV 270 ++ T L+ K G+I A ++ M DV+TYN++I A + ++A + Sbjct: 441 NVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLY 500 Query: 271 SEMYKKGLHPDVFTFNTLVSLLCKEGKTVEACYVYSVMSNMGVTPDIISYRVLMQS 438 EM + G PD+ T+ L+ LC G EA +++ + N G+T D + +++L+++ Sbjct: 501 YEMLRSGHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLTVDHVPFQLLIKN 556 >ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830-like [Glycine max] Length = 577 Score = 317 bits (813), Expect = 2e-84 Identities = 159/312 (50%), Positives = 211/312 (67%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 VHALC+KGLL EA R+L+E+L+D+ E DL+ ST+ MD FK+G I +AL +WN+M Q Sbjct: 231 VHALCEKGLLMEAKRMLEEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQ 290 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVE 360 + +DVV YNV+I G S LAY + EM+KKGL PD FT+N ++ LCKEGK E Sbjct: 291 NCTKVDVVAYNVLINGFCKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISE 350 Query: 361 ACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIID 540 ACY VMSNMG+ PD I+Y+++++ LC I AK L ML + ++P IWN IID Sbjct: 351 ACYTVGVMSNMGIMPDQITYQIVIRGLCFAGEIVRAKHLLWCMLNNLMVPKPLIWNLIID 410 Query: 541 GYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYP 720 YGRY + AF RDQM+++GV PN+FTYNALI A G A +LK EMI ++P Sbjct: 411 LYGRYNDLSNAFFTRDQMLSFGVCPNVFTYNALILAQVKSGNFHGACSLKEEMISKCLFP 470 Query: 721 DVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYCLIGKVASAEKLF 900 DVVTYN+LIGAAC +M ++GY PD+ITYT+L++G+C+ GK+ AE+L+ Sbjct: 471 DVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEPDLITYTELVRGFCIRGKMKEAEELY 530 Query: 901 DKILKSGLVIDH 936 KILKSGL+ DH Sbjct: 531 AKILKSGLLNDH 542 Score = 130 bits (326), Expect = 6e-28 Identities = 81/268 (30%), Positives = 128/268 (47%), Gaps = 3/268 (1%) Frame = +1 Query: 133 NGDISRALAIWNEMPQRHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFT 312 +G + A+ +W +M Q+ DV T+N ++ G A V EM + G P+ T Sbjct: 132 DGKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPNCAT 191 Query: 313 FNTLVSLLCKEGKTVEACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRML 492 +NTL+ C A Y++S M+ G+ P+ ++ R+L+ +LC + AK L +L Sbjct: 192 YNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKRMLEEVL 251 Query: 493 GD---HVLPDSYIWNAIIDGYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQG 663 D +PD I +D Y + G + QA + +QM+ ++ YN LIN Sbjct: 252 KDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAYNVLINGFCKSQ 311 Query: 664 KLVDAYNLKTEMIVNGVYPDVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYT 843 ++ AY EM G+ PD TYNI+IGA C+ M G PD ITY Sbjct: 312 QMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISEACYTVGVMSNMGIMPDQITYQ 371 Query: 844 QLIKGYCLIGKVASAEKLFDKILKSGLV 927 +I+G C G++ A+ L +L + +V Sbjct: 372 IVIRGLCFAGEIVRAKHLLWCMLNNLMV 399 Score = 84.7 bits (208), Expect = 3e-14 Identities = 56/224 (25%), Positives = 94/224 (41%) Frame = +1 Query: 91 DLITSTILMDGCFKNGDISRALAIWNEMPQRHSAMDVVTYNVMIRGAGFSWNSTLAYRFV 270 D T I++ K G IS A M D +TY ++IRG F+ A + Sbjct: 331 DAFTYNIIIGALCKEGKISEACYTVGVMSNMGIMPDQITYQIVIRGLCFAGEIVRAKHLL 390 Query: 271 SEMYKKGLHPDVFTFNTLVSLLCKEGKTVEACYVYSVMSNMGVTPDIISYRVLMQSLCVN 450 M + P +N ++ L + A + M + GV P++ +Y L+ + + Sbjct: 391 WCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFFTRDQMLSFGVCPNVFTYNALILAQVKS 450 Query: 451 DNIDIAKEYLHRMLGDHVLPDSYIWNAIIDGYGRYGYVQQAFRIRDQMVAYGVLPNIFTY 630 N A M+ + PD +N +I G + A + DQMV G P++ TY Sbjct: 451 GNFHGACSLKEEMISKCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEPDLITY 510 Query: 631 NALINALACQGKLVDAYNLKTEMIVNGVYPDVVTYNILIGAACR 762 L+ +GK+ +A L +++ +G+ D V IL C+ Sbjct: 511 TELVRGFCIRGKMKEAEELYAKILKSGLLNDHVPVQILFNKYCK 554 Score = 81.3 bits (199), Expect = 3e-13 Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 39/224 (17%) Frame = +1 Query: 334 LCKEGKTVEACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPD 513 LC +GK A +++ M+ GV D+ ++ ++ LC +D A + ML P+ Sbjct: 129 LCLDGKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPN 188 Query: 514 SYIWNAIIDGYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQ----------- 660 +N +I GY V +A + M G+LPN T L++AL C+ Sbjct: 189 CATYNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRILVHAL-CEKGLLMEAKRML 247 Query: 661 ----------------------------GKLVDAYNLKTEMIVNGVYPDVVTYNILIGAA 756 G ++ A NL +M+ N DVV YN+LI Sbjct: 248 EEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAYNVLINGF 307 Query: 757 CRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYCLIGKVASA 888 C+ EM +KG PD TY +I C GK++ A Sbjct: 308 CKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISEA 351 Score = 57.8 bits (138), Expect = 4e-06 Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 3/171 (1%) Frame = +1 Query: 430 MQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIIDGYGRYGYVQQAFRIRDQMVAYGV 609 ++ LC++ + A +M V+ D + N I++G + G + +A + +M+ +G Sbjct: 126 IRRLCLDGKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGP 185 Query: 610 LPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYPDVVTYNILIGAACRXXXXXXXXX 789 PN TYN LI + A L + M G+ P+ VT IL+ A C Sbjct: 186 RPNCATYNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKR 245 Query: 790 XXXEMQRKGYN---PDIITYTQLIKGYCLIGKVASAEKLFDKILKSGLVID 933 E+ + PD++ T + Y G + A L++++L++ +D Sbjct: 246 MLEEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQNCTKVD 296 >ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830-like [Cucumis sativus] gi|449499387|ref|XP_004160802.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830-like [Cucumis sativus] Length = 633 Score = 316 bits (809), Expect = 6e-84 Identities = 152/311 (48%), Positives = 221/311 (71%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 +HALCK+G+L +A +LL+ IL D++++ T D ITSTILMD CFK+GD +A+A+W++M + Sbjct: 246 LHALCKRGILVDARKLLEVILGDDIKT-TDDAITSTILMDSCFKSGDTIQAVALWDKMVE 304 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVE 360 + + +DVV YNV+I G + + +A +V++M K+G PD+FT+NTL+S CKEG+ + Sbjct: 305 KKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFGD 364 Query: 361 ACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIID 540 A Y++ VMS MGV+PD I Y++++Q+LC+N + A E+LH ML ++P+ +IWN IID Sbjct: 365 AYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPEPHIWNLIID 424 Query: 541 GYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYP 720 YGRYGY+ A RDQM+ GV PN+FTYNALI+A G + AY+LK EM++ G++P Sbjct: 425 CYGRYGYLSNAISKRDQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFP 484 Query: 721 DVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYCLIGKVASAEKLF 900 DVVTYN+LI AC+ EM RKGY D ITYT+LI G+C+ G++ AE LF Sbjct: 485 DVVTYNLLINGACKHGQLRFALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLF 544 Query: 901 DKILKSGLVID 933 ++ +SGL +D Sbjct: 545 FELHRSGLPMD 555 Score = 115 bits (288), Expect = 1e-23 Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 2/277 (0%) Frame = +1 Query: 103 STILMDGCFKNGDISRALAIWNEMPQRHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMY 282 + ++ D C K G AL + ++ + A+D+VT+N ++ G + + +A EM Sbjct: 138 TVMVRDLCLK-GKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCDMEMADSLFREML 196 Query: 283 KKGLHPDVFTFNTLVSLLCKEGKTVEACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNID 462 + G P+ T+N ++ C +A ++ M N G+ P I+Y +L+ +LC + Sbjct: 197 EMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNILLHALCKRGILV 256 Query: 463 IAKEYLHRMLGDHV--LPDSYIWNAIIDGYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNA 636 A++ L +LGD + D+ ++D + G QA + D+MV ++ YN Sbjct: 257 DARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVEKKTEIDVVAYNV 316 Query: 637 LINALACQGKLVDAYNLKTEMIVNGVYPDVVTYNILIGAACRXXXXXXXXXXXXEMQRKG 816 LI+ L A +M+ G PD+ TYN LI A C+ M R G Sbjct: 317 LIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFGDAYYIHDVMSRMG 376 Query: 817 YNPDIITYTQLIKGYCLIGKVASAEKLFDKILKSGLV 927 +PD I Y +I+ C+ G A++ +L+ +V Sbjct: 377 VSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMV 413 Score = 88.2 bits (217), Expect = 3e-15 Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 2/244 (0%) Frame = +1 Query: 208 YNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVEACYVYSVMS 387 Y VM+R A ++ K+G D+ T N L++ LC A ++ M Sbjct: 137 YTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCDMEMADSLFREML 196 Query: 388 NMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIIDGYGRYGYVQ 567 MG +P+ +Y ++++ C+ N+D A + + M+ + P +N ++ + G + Sbjct: 197 EMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNILLHALCKRGILV 256 Query: 568 QAFRIRDQMVAYGV--LPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYPDVVTYNI 741 A ++ + ++ + + T L+++ G + A L +M+ DVV YN+ Sbjct: 257 DARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVEKKTEIDVVAYNV 316 Query: 742 LIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYCLIGKVASAEKLFDKILKSG 921 LI C +M ++G+ PDI TY LI +C G+ A + D + + G Sbjct: 317 LIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFGDAYYIHDVMSRMG 376 Query: 922 LVID 933 + D Sbjct: 377 VSPD 380 Score = 67.4 bits (163), Expect = 5e-09 Identities = 52/201 (25%), Positives = 87/201 (43%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 + ALC G +A L +LE +S + +++D + G +S A++ ++M Sbjct: 388 IQALCMNGDAIKADEFLHSMLE---KSMVPEPHIWNLIIDCYGRYGYLSNAISKRDQMLV 444 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVE 360 +V TYN +I N AY EM GL PDV T+N L++ CK G+ Sbjct: 445 AGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTYNLLINGACKHGQLRF 504 Query: 361 ACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIID 540 A +Y M G D I+Y L+ C+ + A++ + + D + I + Sbjct: 505 ALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLFFELHRSGLPMDIVPFKVIFE 564 Query: 541 GYGRYGYVQQAFRIRDQMVAY 603 Y + G A + + +AY Sbjct: 565 KYQKIGEPDMALKFYRRRLAY 585 >ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g24830 gi|22655280|gb|AAM98230.1| putative protein [Arabidopsis thaliana] gi|30725398|gb|AAP37721.1| At5g24830 [Arabidopsis thaliana] gi|332005984|gb|AED93367.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 593 Score = 304 bits (779), Expect = 2e-80 Identities = 146/313 (46%), Positives = 208/313 (66%), Gaps = 1/313 (0%) Frame = +1 Query: 1 VHALCKKGLLGEATR-LLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMP 177 VHALC+KG++G + LL+EIL+ + D++ TILMD CFKNG++ +AL +W EM Sbjct: 233 VHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMS 292 Query: 178 QRHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTV 357 Q++ D V YNV+IRG S N AY F+ +M K+G++PDVFT+NTL+S LCKEGK Sbjct: 293 QKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352 Query: 358 EACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAII 537 EAC ++ M N GV PD ISY+V++Q LC++ +++ A E+L ML +LP+ +WN +I Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVI 412 Query: 538 DGYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVY 717 DGYGRYG A + + M++YGV PN++T NALI+ G+L+DA+ +K EM ++ Sbjct: 413 DGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH 472 Query: 718 PDVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYCLIGKVASAEKL 897 PD TYN+L+GAAC EM R+G PDIITYT+L++G C G++ AE L Sbjct: 473 PDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532 Query: 898 FDKILKSGLVIDH 936 +I +G+ IDH Sbjct: 533 LSRIQATGITIDH 545 Score = 117 bits (294), Expect = 3e-24 Identities = 91/311 (29%), Positives = 146/311 (46%), Gaps = 6/311 (1%) Frame = +1 Query: 10 LCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQRHS 189 LC +G L A L ++++ + LIT L++G K G I +A + EM + Sbjct: 131 LCLQGKLDAALWLRKKMIYSGV---IPGLITHNHLLNGLCKAGYIEKADGLVREMREMGP 187 Query: 190 AMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEG------K 351 + + V+YN +I+G N A + M K G+ P+ T N +V LC++G K Sbjct: 188 SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK 247 Query: 352 TVEACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNA 531 + + S +N + DI+ +LM S N N+ A E M +V DS ++N Sbjct: 248 KLLEEILDSSQANAPL--DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNV 305 Query: 532 IIDGYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTEMIVNG 711 II G G + A+ MV GV P++FTYN LI+AL +GK +A +L M G Sbjct: 306 IIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG 365 Query: 712 VYPDVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYCLIGKVASAE 891 V PD ++Y ++I C M + P+++ + +I GY G +SA Sbjct: 366 VAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSAL 425 Query: 892 KLFDKILKSGL 924 + + +L G+ Sbjct: 426 SVLNLMLSYGV 436 Score = 100 bits (250), Expect = 4e-19 Identities = 72/257 (28%), Positives = 106/257 (41%), Gaps = 39/257 (15%) Frame = +1 Query: 274 EMYKKGLHPDVFTFNTLVSLLCKEGKTVEACYVYSVMSNMGVTPDIISYRVLMQSLCVND 453 +M G+ P + T N L++ LCK G +A + M MG +P+ +SY L++ LC + Sbjct: 146 KMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVN 205 Query: 454 NIDIAKEYLHRMLGDHVLPDSYIWNAII-------------------------------- 537 N+D A + M + P+ N I+ Sbjct: 206 NVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDI 265 Query: 538 -------DGYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTE 696 D + G V QA + +M V + YN +I L G +V AY + Sbjct: 266 VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCD 325 Query: 697 MIVNGVYPDVVTYNILIGAACRXXXXXXXXXXXXEMQRKGYNPDIITYTQLIKGYCLIGK 876 M+ GV PDV TYN LI A C+ MQ G PD I+Y +I+G C+ G Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385 Query: 877 VASAEKLFDKILKSGLV 927 V A + +LKS L+ Sbjct: 386 VNRANEFLLSMLKSSLL 402 Score = 88.2 bits (217), Expect = 3e-15 Identities = 60/248 (24%), Positives = 111/248 (44%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 + LC G + A + ++++ D+ T L+ K G A + M Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVK---RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVE 360 A D ++Y V+I+G + A F+ M K L P+V +N ++ + G T Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423 Query: 361 ACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIID 540 A V ++M + GV P++ + L+ + A + M + PD+ +N ++ Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483 Query: 541 GYGRYGYVQQAFRIRDQMVAYGVLPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYP 720 G+++ AF++ D+M+ G P+I TY L+ L +G+L A +L + + G+ Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543 Query: 721 DVVTYNIL 744 D V + IL Sbjct: 544 DHVPFLIL 551 Score = 70.1 bits (170), Expect = 7e-10 Identities = 52/200 (26%), Positives = 87/200 (43%) Frame = +1 Query: 1 VHALCKKGLLGEATRLLQEILEDELESKTSDLITSTILMDGCFKNGDISRALAIWNEMPQ 180 + LC G + A L +L+ L +++ +++DG + GD S AL++ N M Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSL---LPEVLLWNVVIDGYGRYGDTSSALSVLNLMLS 433 Query: 181 RHSAMDVVTYNVMIRGAGFSWNSTLAYRFVSEMYKKGLHPDVFTFNTLVSLLCKEGKTVE 360 +V T N +I G A+ +EM +HPD T+N L+ C G Sbjct: 434 YGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRL 493 Query: 361 ACYVYSVMSNMGVTPDIISYRVLMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIID 540 A +Y M G PDII+Y L++ LC + A+ L R+ + D + + Sbjct: 494 AFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAK 553 Query: 541 GYGRYGYVQQAFRIRDQMVA 600 Y R +A+ + + +A Sbjct: 554 KYTRLQRPGEAYLVYKKWLA 573 Score = 62.0 bits (149), Expect = 2e-07 Identities = 32/99 (32%), Positives = 54/99 (54%) Frame = +1 Query: 628 YNALINALACQGKLVDAYNLKTEMIVNGVYPDVVTYNILIGAACRXXXXXXXXXXXXEMQ 807 +++++ L QGKL A L+ +MI +GV P ++T+N L+ C+ EM+ Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183 Query: 808 RKGYNPDIITYTQLIKGYCLIGKVASAEKLFDKILKSGL 924 G +P+ ++Y LIKG C + V A LF+ + K G+ Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGI 222 Score = 57.8 bits (138), Expect = 4e-06 Identities = 33/112 (29%), Positives = 56/112 (50%) Frame = +1 Query: 427 LMQSLCVNDNIDIAKEYLHRMLGDHVLPDSYIWNAIIDGYGRYGYVQQAFRIRDQMVAYG 606 +M+ LC+ +D A +M+ V+P N +++G + GY+++A + +M G Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186 Query: 607 VLPNIFTYNALINALACQGKLVDAYNLKTEMIVNGVYPDVVTYNILIGAACR 762 PN +YN LI L + A L M G+ P+ VT NI++ A C+ Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238