BLASTX nr result

ID: Bupleurum21_contig00023736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023736
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_002870304.1| hypothetical protein ARALYDRAFT_355343 [Arab...   150   1e-34
ref|XP_003610502.1| Integrator complex subunit-like protein [Med...   135   5e-30
ref|XP_002527040.1| conserved hypothetical protein [Ricinus comm...   134   1e-29
ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homo...   132   4e-29

>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score =  155 bits (392), Expect = 3e-36
 Identities = 70/108 (64%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   LNRAILYGILCEPQMANVHIKHLHGIVTDGYGFFTNTLVKIVNELYGKLADSVRVQLIWI 180
           LN AILYG+L EP +A  HIKHLH IVTDGY  F + +VKIVN+LYGKL DSV+ QL+W+
Sbjct: 49  LNLAILYGVLTEPLLAKTHIKHLHAIVTDGYALFVSLIVKIVNDLYGKLVDSVKDQLVWV 108

Query: 181 TSEMIDVLAMGFNDLLVSLMRQIVGGDFSGSNLWLCSELIGVFLAKWD 324
             EM+DVL +GF+  LV L+RQIVGGDFS  NLWLC EL+ +F +KWD
Sbjct: 109 VKEMVDVLGVGFDGFLVCLLRQIVGGDFSDGNLWLCFELVSLFSSKWD 156


>ref|XP_002870304.1| hypothetical protein ARALYDRAFT_355343 [Arabidopsis lyrata subsp.
           lyrata] gi|297316140|gb|EFH46563.1| hypothetical protein
           ARALYDRAFT_355343 [Arabidopsis lyrata subsp. lyrata]
          Length = 726

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/108 (61%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   LNRAILYGILCEPQMANVHIKHLHGIVTDGYGFFTNTLVKIVNELYGKLADSVRVQLIWI 180
           LN+AI+YG+LCEP  +  HIKHLH +VTDGY FFT+ L+ IV EL+ KL DS ++QLIW+
Sbjct: 54  LNKAIVYGVLCEPNYSKTHIKHLHALVTDGYAFFTSLLIGIVVELHVKLVDSAKIQLIWV 113

Query: 181 TSEMIDVLAMGFNDLLVSLMRQIVGGDFSGSNLWLCSELIGVFLAKWD 324
           T EMIDV ++G  DLLVSL+R+I  GD+   N+WLCSEL+ +FL KWD
Sbjct: 114 TKEMIDVSSVGIEDLLVSLLRRIGSGDYGDQNVWLCSELVSLFLEKWD 161


>ref|XP_003610502.1| Integrator complex subunit-like protein [Medicago truncatula]
           gi|355511557|gb|AES92699.1| Integrator complex
           subunit-like protein [Medicago truncatula]
          Length = 560

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/108 (57%), Positives = 78/108 (72%)
 Frame = +1

Query: 1   LNRAILYGILCEPQMANVHIKHLHGIVTDGYGFFTNTLVKIVNELYGKLADSVRVQLIWI 180
           LN AIL+ IL +P  +  H+KHLH I+TDGY  F N L  IV+ LY KL  SV+ QLIW+
Sbjct: 49  LNHAILHAILTQPHFSKTHVKHLHAIITDGYATFLNLLFNIVHHLYPKLLGSVKHQLIWV 108

Query: 181 TSEMIDVLAMGFNDLLVSLMRQIVGGDFSGSNLWLCSELIGVFLAKWD 324
           T EMI V  +G++ LL+SL+RQIVGGDFS  NLWLC +L+ + L KWD
Sbjct: 109 TDEMIQVSGIGYDALLISLLRQIVGGDFSDDNLWLCEKLVTLLLDKWD 156


>ref|XP_002527040.1| conserved hypothetical protein [Ricinus communis]
           gi|223533602|gb|EEF35340.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 982

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/99 (64%), Positives = 79/99 (79%)
 Frame = +1

Query: 1   LNRAILYGILCEPQMANVHIKHLHGIVTDGYGFFTNTLVKIVNELYGKLADSVRVQLIWI 180
           LNRAIL G+L + QMA  +IK+LH IVTDGY FF +  VKIVN+LY KL DSV+ QLIW+
Sbjct: 49  LNRAILCGVLTDSQMAKTYIKYLHAIVTDGYAFFVSLTVKIVNDLYVKLDDSVKGQLIWV 108

Query: 181 TSEMIDVLAMGFNDLLVSLMRQIVGGDFSGSNLWLCSEL 297
             EM+DVLA+GF+ LLVSL+RQI+GGDFS  NLWL + +
Sbjct: 109 AKEMVDVLAVGFDGLLVSLLRQIIGGDFSDGNLWLLNNV 147


>ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homolog [Cucumis sativus]
          Length = 588

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/107 (58%), Positives = 74/107 (69%)
 Frame = +1

Query: 1   LNRAILYGILCEPQMANVHIKHLHGIVTDGYGFFTNTLVKIVNELYGKLADSVRVQLIWI 180
           LN AILYGILCEP +   HIKHLH IVTDGYG     L K+VNELY KL D  + Q+  +
Sbjct: 49  LNWAILYGILCEPHLGKTHIKHLHAIVTDGYGLICYLLRKVVNELYLKLIDGAKCQIFMV 108

Query: 181 TSEMIDVLAMGFNDLLVSLMRQIVGGDFSGSNLWLCSELIGVFLAKW 321
           T EMI V A+G + +L+SL+RQIVGGDF   NLWLC EL  + L  W
Sbjct: 109 TKEMIKVCAVGVDAVLISLLRQIVGGDFGEGNLWLCFELASLLLNSW 155


Top