BLASTX nr result

ID: Bupleurum21_contig00023725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023725
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]       395   e-108
emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]   392   e-107
ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containi...   390   e-106
gb|ABU45173.1| unknown [Solanum melongena]                            388   e-105
gb|ABU45207.1| unknown [Solanum bulbocastanum]                        386   e-105

>gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]
          Length = 417

 Score =  395 bits (1016), Expect = e-108
 Identities = 185/274 (67%), Positives = 226/274 (82%)
 Frame = -2

Query: 822 LRTEYDPDKALEIYGTVSGHYPSPLASRYAQDLTVKRLAKARRFKDIETLLESHKNDPKV 643
           LR  YDPDKALEIY +VS +Y SPL+SRY Q+ TV+RLAK+ RF DIE+ LESHKNDPK+
Sbjct: 50  LRYVYDPDKALEIYSSVSPNYTSPLSSRYTQEYTVRRLAKSHRFSDIESFLESHKNDPKI 109

Query: 642 KKEPFLTTLIRSYGLAGMFNHALDTYNQMDDLGTPRTTVSFNGLLSACNTSKLFARVPQL 463
            +EPFL++LIRSYGLAGMF+HAL T+N+MDDLGTPR+TVSFN LLSACN+SK F R P+L
Sbjct: 110 TQEPFLSSLIRSYGLAGMFDHALKTFNEMDDLGTPRSTVSFNALLSACNSSKNFGRAPEL 169

Query: 462 FDEMSQKHGVKPDVYSYGILIKSYCVVGLPEKGIERMREMEEKGIEVTAVVFTTVLHSLY 283
           FDE+ Q++G+ PD +SYG LIK+YC +G PE  +ER++EMEEKGIE+TAV FTT++HS Y
Sbjct: 170 FDEVPQRYGLSPDKFSYGNLIKAYCEMGSPESALERLKEMEEKGIEITAVTFTTIMHSFY 229

Query: 282 KSGNVEEAEKIWDEMVSKGCLPDVGAYNVRLMHAHNDKPETVKKLIAEMSDAGLKPDTIS 103
           K G  EEAE++W EMV +GC  DVGAYNVR+MH H + P++VK LI E+S AGLKPDTIS
Sbjct: 230 KKGKNEEAERVWSEMVKRGCPIDVGAYNVRIMHIHGEDPDSVKGLIEEISSAGLKPDTIS 289

Query: 102 YNYLMNCYCMNDMMAEAKKVYEELKSNSCSPNAA 1
           YNYLM  YC + MM EA KVYE+L+ N C PNAA
Sbjct: 290 YNYLMTSYCKSGMMDEAFKVYEDLEGNGCKPNAA 323


>emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
          Length = 416

 Score =  392 bits (1006), Expect = e-107
 Identities = 186/274 (67%), Positives = 226/274 (82%)
 Frame = -2

Query: 822 LRTEYDPDKALEIYGTVSGHYPSPLASRYAQDLTVKRLAKARRFKDIETLLESHKNDPKV 643
           LR+E+DPD+ALEIY +VS HY SPLASRYAQDLTVKRLAK+RRF DIETL+ESHKNDPK+
Sbjct: 46  LRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKI 105

Query: 642 KKEPFLTTLIRSYGLAGMFNHALDTYNQMDDLGTPRTTVSFNGLLSACNTSKLFARVPQL 463
            +EP+L+TLIRSYG+AGMF HAL T+NQM++LGTPR+++SFN LLSACN SKLF +VP+ 
Sbjct: 106 TQEPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKF 165

Query: 462 FDEMSQKHGVKPDVYSYGILIKSYCVVGLPEKGIERMREMEEKGIEVTAVVFTTVLHSLY 283
           F+E+ +++G+ PD  SYGIL+KSYC  GL +K I  ++EMEEKG+E+TAV FTT+L +LY
Sbjct: 166 FEEIPRRYGIXPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALY 225

Query: 282 KSGNVEEAEKIWDEMVSKGCLPDVGAYNVRLMHAHNDKPETVKKLIAEMSDAGLKPDTIS 103
           K G  + AEK+W EM  KGCL DVGAYNV++M AH   PE VK LI EMS+AGLKPDTIS
Sbjct: 226 KQGQSDRAEKVWHEMAKKGCL-DVGAYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTIS 284

Query: 102 YNYLMNCYCMNDMMAEAKKVYEELKSNSCSPNAA 1
           YNYLM  YC + MM EAKKVY EL+   C PNAA
Sbjct: 285 YNYLMTSYCKSGMMDEAKKVYAELEETGCHPNAA 318



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
 Frame = -2

Query: 618 LIRSYGLAGMFNHALDTYNQMDDLGTPRTTVSFNGLLSAC-------------------- 499
           L++SY  +G+ + A+    +M++ G   T V+F  +L A                     
Sbjct: 185 LVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKG 244

Query: 498 -------NTSKLFAR------VPQLFDEMSQKHGVKPDVYSYGILIKSYCVVGLPEKGIE 358
                  N   +FA       V  L DEMS   G+KPD  SY  L+ SYC  G+ ++  +
Sbjct: 245 CLDVGAYNVKIMFAHGGDPENVKALIDEMSNA-GLKPDTISYNYLMTSYCKSGMMDEAKK 303

Query: 357 RMREMEEKGIEVTAVVFTTVLHSLYKSGNVEEAEKIWDEMVSKGCLPDVG 208
              E+EE G    A  F T+++ L +SG+ E   K++ +   +  +PD G
Sbjct: 304 VYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFG 353


>ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
           mitochondrial-like [Vitis vinifera]
          Length = 414

 Score =  390 bits (1002), Expect = e-106
 Identities = 186/274 (67%), Positives = 226/274 (82%)
 Frame = -2

Query: 822 LRTEYDPDKALEIYGTVSGHYPSPLASRYAQDLTVKRLAKARRFKDIETLLESHKNDPKV 643
           LR+E+DPD+ALEIY +VS HY SPLASRYAQDLTVKRLAK+RRF DIETL+ESHKNDPK+
Sbjct: 44  LRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKI 103

Query: 642 KKEPFLTTLIRSYGLAGMFNHALDTYNQMDDLGTPRTTVSFNGLLSACNTSKLFARVPQL 463
            +EP+L+TLIRSYG+AGMF HAL T+NQM++LGTPR+++SFN LLSACN SKLF +VP+ 
Sbjct: 104 TQEPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKF 163

Query: 462 FDEMSQKHGVKPDVYSYGILIKSYCVVGLPEKGIERMREMEEKGIEVTAVVFTTVLHSLY 283
           F+E+ +++GV PD  SYGIL+KSYC  GL +K I  ++EMEEKG+E+TAV FTT+L +LY
Sbjct: 164 FEEIPRRYGVLPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALY 223

Query: 282 KSGNVEEAEKIWDEMVSKGCLPDVGAYNVRLMHAHNDKPETVKKLIAEMSDAGLKPDTIS 103
           K G  + AEK+W EM  KGCL DVGAYNV++M AH   PE VK LI EMS+AGLKPDTIS
Sbjct: 224 KQGQSDRAEKVWHEMAKKGCL-DVGAYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTIS 282

Query: 102 YNYLMNCYCMNDMMAEAKKVYEELKSNSCSPNAA 1
           YNYLM  YC + M+ EAKKVY EL+   C PNAA
Sbjct: 283 YNYLMTSYCKSGMVDEAKKVYAELEETGCHPNAA 316



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
 Frame = -2

Query: 618 LIRSYGLAGMFNHALDTYNQMDDLGTPRTTVSFNGLLSAC-------------------- 499
           L++SY  +G+ + A+    +M++ G   T V+F  +L A                     
Sbjct: 183 LVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKG 242

Query: 498 -------NTSKLFAR------VPQLFDEMSQKHGVKPDVYSYGILIKSYCVVGLPEKGIE 358
                  N   +FA       V  L DEMS   G+KPD  SY  L+ SYC  G+ ++  +
Sbjct: 243 CLDVGAYNVKIMFAHGGDPENVKALIDEMSNA-GLKPDTISYNYLMTSYCKSGMVDEAKK 301

Query: 357 RMREMEEKGIEVTAVVFTTVLHSLYKSGNVEEAEKIWDEMVSKGCLPDVG 208
              E+EE G    A  F T+++ L +SG+ E   K++ +   +  +PD G
Sbjct: 302 VYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFG 351


>gb|ABU45173.1| unknown [Solanum melongena]
          Length = 427

 Score =  388 bits (997), Expect = e-105
 Identities = 183/274 (66%), Positives = 224/274 (81%)
 Frame = -2

Query: 822 LRTEYDPDKALEIYGTVSGHYPSPLASRYAQDLTVKRLAKARRFKDIETLLESHKNDPKV 643
           L+ E+DPDKALEIY +VS  Y SPL+SRYAQ+  VKRLAK+ RF DIE  LESHKN PK+
Sbjct: 38  LKAEHDPDKALEIYSSVSDRYISPLSSRYAQEYIVKRLAKSHRFSDIENFLESHKNSPKI 97

Query: 642 KKEPFLTTLIRSYGLAGMFNHALDTYNQMDDLGTPRTTVSFNGLLSACNTSKLFARVPQL 463
            +EPFL+++IRSYG+A MF+HAL  Y+QMDDLGTPR+ +SFN LLSAC  SKL+ RV QL
Sbjct: 98  TQEPFLSSIIRSYGVARMFDHALKIYHQMDDLGTPRSAISFNVLLSACMHSKLYDRVAQL 157

Query: 462 FDEMSQKHGVKPDVYSYGILIKSYCVVGLPEKGIERMREMEEKGIEVTAVVFTTVLHSLY 283
           FDE+  K+G  PD  SYG+LI+SYC +GLPE  +ER +EMEEKG+E+TAV FTT+LHS Y
Sbjct: 158 FDEIPVKYGFLPDKVSYGVLIRSYCEMGLPEMAMERFKEMEEKGVEITAVAFTTILHSFY 217

Query: 282 KSGNVEEAEKIWDEMVSKGCLPDVGAYNVRLMHAHNDKPETVKKLIAEMSDAGLKPDTIS 103
           K G  +EAE++W+EMVS+GC PDVGAYNV++M+    KPE VK LI EMS+AGLKPDTIS
Sbjct: 218 KKGKSDEAERVWNEMVSRGCGPDVGAYNVKIMNIQGSKPEGVKALIEEMSNAGLKPDTIS 277

Query: 102 YNYLMNCYCMNDMMAEAKKVYEELKSNSCSPNAA 1
           YNYLM CYC N +M EA+KVYE+LK+N C+PNAA
Sbjct: 278 YNYLMTCYCKNQLMDEAQKVYEDLKTNGCNPNAA 311


>gb|ABU45207.1| unknown [Solanum bulbocastanum]
          Length = 405

 Score =  386 bits (992), Expect = e-105
 Identities = 180/274 (65%), Positives = 225/274 (82%)
 Frame = -2

Query: 822 LRTEYDPDKALEIYGTVSGHYPSPLASRYAQDLTVKRLAKARRFKDIETLLESHKNDPKV 643
           L+ E+DPDKALEIY +VS  Y SPL+SRYAQ+ TVKRLAK+ RF DIE  LESHKN PK+
Sbjct: 40  LKAEHDPDKALEIYSSVSDRYVSPLSSRYAQEFTVKRLAKSHRFSDIENFLESHKNSPKI 99

Query: 642 KKEPFLTTLIRSYGLAGMFNHALDTYNQMDDLGTPRTTVSFNGLLSACNTSKLFARVPQL 463
            +EPFL+++IRSYG+AGMF+HAL  Y+QMDDLGTPR+ +SFN LLSAC  SKL+ RVPQL
Sbjct: 100 TQEPFLSSIIRSYGVAGMFDHALKIYHQMDDLGTPRSAISFNVLLSACVRSKLYDRVPQL 159

Query: 462 FDEMSQKHGVKPDVYSYGILIKSYCVVGLPEKGIERMREMEEKGIEVTAVVFTTVLHSLY 283
           FDE+  K+G  PD  SYGILI+SYC +G PE  +ER++EMEEKG+E+T+V FTT+LHS Y
Sbjct: 160 FDEIPVKYGFLPDKVSYGILIRSYCEMGSPEMAMERLKEMEEKGVEITSVTFTTILHSFY 219

Query: 282 KSGNVEEAEKIWDEMVSKGCLPDVGAYNVRLMHAHNDKPETVKKLIAEMSDAGLKPDTIS 103
           K    +EAEK+W+EMV++GC PDVGAYNV++M+     PE VK LI EM+DAGLKPDTIS
Sbjct: 220 KKRKSDEAEKVWNEMVNRGCGPDVGAYNVKIMNIQGGDPEGVKALIEEMNDAGLKPDTIS 279

Query: 102 YNYLMNCYCMNDMMAEAKKVYEELKSNSCSPNAA 1
           YNYLM CYC N+++ EA+KVY++L+ N C+PNAA
Sbjct: 280 YNYLMTCYCRNELIDEAQKVYDDLEKNGCNPNAA 313


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