BLASTX nr result

ID: Bupleurum21_contig00023724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023724
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin...    87   1e-15
ref|XP_002524280.1| Small glutamine-rich tetratricopeptide repea...    80   2e-13
ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-c...    75   6e-12
ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin...    75   6e-12
ref|XP_003556806.1| PREDICTED: TPR repeat-containing thioredoxin...    70   2e-10

>ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Vitis
           vinifera]
          Length = 656

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 63/163 (38%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
 Frame = -3

Query: 452 MSHSGKPISELGLNKLTDRFRKSLRYDQHNNKDDGNKPDFRELDLGSPVSPLRPT---VV 282
           MSHSGKP+SE+GL  + DRFR++L  D        NKPDF+ELDLGSPVSPLR       
Sbjct: 1   MSHSGKPMSEVGLGAVADRFRETLNCDN-------NKPDFKELDLGSPVSPLRTRRSGPA 53

Query: 281 ATXXXXXXXXXXXXXXXXXRNEAKPQPKKXXXXXXXXXXXXXXXXXXSPTLSARV----- 117
            +                 RN      K+                  SPT +  V     
Sbjct: 54  GSGVTTTSSSSSSSGSVSCRNANNQLAKRADGAGNNHSGELSGSSESSPTAAESVRSGGA 113

Query: 116 ----KKQPGRSDS-HLNGFVYSGGSSVNSPPASALPAGNICPS 3
               K   GRSDS   +  +YSGG SVNSP  +  P GNICPS
Sbjct: 114 SRNFKPGHGRSDSGGAHPLIYSGGGSVNSPSVNVFPTGNICPS 156


>ref|XP_002524280.1| Small glutamine-rich tetratricopeptide repeat-containing protein A,
           putative [Ricinus communis] gi|223536471|gb|EEF38119.1|
           Small glutamine-rich tetratricopeptide repeat-containing
           protein A, putative [Ricinus communis]
          Length = 640

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 63/158 (39%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
 Frame = -3

Query: 452 MSHSGKPISELGLNKLTDRFRKSLRYDQHNNKDDGNKPDFRELDLGSPVSPLRP----TV 285
           MSHSG PI E+GL+ LTD+ R S      +   + NKPDFRELDLGSPVSPLR     T 
Sbjct: 1   MSHSGNPIGEVGLDSLTDQLRDS------SCSLEANKPDFRELDLGSPVSPLRTRGLNTT 54

Query: 284 VATXXXXXXXXXXXXXXXXXRNEAKPQPKKXXXXXXXXXXXXXXXXXXSPTLSARVKKQP 105
             T                      P P                    S T S R  K  
Sbjct: 55  TTTTTTTTTSSSSSSSGSASGTRNGPHP----------VLKSNHSGELSETTSIRTPKPS 104

Query: 104 GRSDSHLNGFVYSGG---SSVNSP-PASALPAGNICPS 3
            RSD      +YSG    SSVNSP P + LP GNICPS
Sbjct: 105 SRSDP----LIYSGSGSQSSVNSPAPMNVLPTGNICPS 138


>ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-containing thioredoxin
           TTL1-like [Cucumis sativus]
          Length = 698

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 60/161 (37%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
 Frame = -3

Query: 452 MSHSGKPISELGLNKLTDRFRKSLRYDQHNNKDDGNKPDFRELDLGSPVSPLRPTVVATX 273
           MSHSG PIS+L  + L+DRFR S+  +        NKPDFRELDLGSPVSPLR       
Sbjct: 1   MSHSGNPISDLRFDHLSDRFRDSVSCEV-------NKPDFRELDLGSPVSPLRTRHQTGG 53

Query: 272 XXXXXXXXXXXXXXXXRNEAKPQPKKXXXXXXXXXXXXXXXXXXSPTLSARV-------- 117
                           RN   P  K+                  SPT +  +        
Sbjct: 54  GPAASSSSSSSGSVSGRNGPNPVAKRSDSGPNNHSGELSGSSESSPTAAESLRSIGTPKN 113

Query: 116 -KKQPGRSDSHLN-GFVYSGGS-SVNSPPASALPAGNICPS 3
            K    RSDS  N   +YSG S S  + P++ LP GNICPS
Sbjct: 114 FKSGHNRSDSASNHPLIYSGQSQSSVTSPSNVLPTGNICPS 154


>ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cucumis
           sativus]
          Length = 698

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 60/161 (37%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
 Frame = -3

Query: 452 MSHSGKPISELGLNKLTDRFRKSLRYDQHNNKDDGNKPDFRELDLGSPVSPLRPTVVATX 273
           MSHSG PIS+L  + L+DRFR S+  +        NKPDFRELDLGSPVSPLR       
Sbjct: 1   MSHSGNPISDLRFDHLSDRFRDSVSCEV-------NKPDFRELDLGSPVSPLRTRHQTGG 53

Query: 272 XXXXXXXXXXXXXXXXRNEAKPQPKKXXXXXXXXXXXXXXXXXXSPTLSARV-------- 117
                           RN   P  K+                  SPT +  +        
Sbjct: 54  GPAASSSSSSSGSVSGRNGPNPVAKRSDSGPNNHSGELSGSSESSPTAAESLRSIGTPKN 113

Query: 116 -KKQPGRSDSHLN-GFVYSGGS-SVNSPPASALPAGNICPS 3
            K    RSDS  N   +YSG S S  + P++ LP GNICPS
Sbjct: 114 FKSGHNRSDSASNHPLIYSGQSQSSVTSPSNVLPTGNICPS 154


>ref|XP_003556806.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine
           max]
          Length = 676

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 58/158 (36%), Positives = 65/158 (41%), Gaps = 8/158 (5%)
 Frame = -3

Query: 452 MSHSGKPIS-ELGLNKLTDRFRKSLRYDQHNNKDDGNKPDFRELDLGSPVSPLR------ 294
           MSHS KP+S ELG    T+RFR SL     N     NKPDFRELDLGSPVS LR      
Sbjct: 1   MSHSRKPVSSELGF---TERFRDSLSCSDDNT----NKPDFRELDLGSPVSTLRPRHYHS 53

Query: 293 -PTVVATXXXXXXXXXXXXXXXXXRNEAKPQPKKXXXXXXXXXXXXXXXXXXSPTLSARV 117
            PT  ++                  N      +                    P      
Sbjct: 54  APTTTSSTSTSTSSGSTGSGSGRSGNNNAVSKRSHSGELSGSSETNSPTRVSKPGHRRSN 113

Query: 116 KKQPGRSDSHLNGFVYSGGSSVNSPPASALPAGNICPS 3
             Q  RS S       S  ++VNSPP S LPAGNICPS
Sbjct: 114 SGQSQRSPSS-----SSSSAAVNSPPLSVLPAGNICPS 146


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