BLASTX nr result

ID: Bupleurum21_contig00023718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023718
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001149117.1| ADP-ribosylation factor [Zea mays] gi|242054...    56   3e-06
gb|ABF74733.1| ADP-ribosylation factor 1 [Nicotiana benthamiana]       56   3e-06
ref|XP_001764700.1| predicted protein [Physcomitrella patens sub...    55   5e-06
ref|XP_004161090.1| PREDICTED: ADP-ribosylation factor 1-like [C...    55   6e-06
gb|AAF65512.1| ADP-ribosylation factor [Capsicum annuum] gi|3779...    55   6e-06

>ref|NP_001149117.1| ADP-ribosylation factor [Zea mays] gi|242054753|ref|XP_002456522.1|
           hypothetical protein SORBIDRAFT_03g037760 [Sorghum
           bicolor] gi|194699598|gb|ACF83883.1| unknown [Zea mays]
           gi|194707852|gb|ACF88010.1| unknown [Zea mays]
           gi|195624848|gb|ACG34254.1| ADP-ribosylation factor [Zea
           mays] gi|195645320|gb|ACG42128.1| ADP-ribosylation
           factor [Zea mays] gi|241928497|gb|EES01642.1|
           hypothetical protein SORBIDRAFT_03g037760 [Sorghum
           bicolor] gi|414880022|tpg|DAA57153.1| TPA:
           ADP-ribosylation factor [Zea mays]
          Length = 181

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +3

Query: 3   STCATSGEGLYEGLDWLSNNIANKS 77
           STCATSGEGLYEGLDWLSNNIANKS
Sbjct: 157 STCATSGEGLYEGLDWLSNNIANKS 181


>gb|ABF74733.1| ADP-ribosylation factor 1 [Nicotiana benthamiana]
          Length = 181

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +3

Query: 3   STCATSGEGLYEGLDWLSNNIANKS 77
           STCATSGEGLYEGLDWLSNNIANKS
Sbjct: 157 STCATSGEGLYEGLDWLSNNIANKS 181


>ref|XP_001764700.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162683994|gb|EDQ70399.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 190

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/31 (80%), Positives = 27/31 (87%)
 Frame = +3

Query: 3   STCATSGEGLYEGLDWLSNNIANKS*WHNFP 95
           STCATSGEGLYEGLDWLS+NIANK   H+ P
Sbjct: 157 STCATSGEGLYEGLDWLSSNIANKIGCHDVP 187


>ref|XP_004161090.1| PREDICTED: ADP-ribosylation factor 1-like [Cucumis sativus]
          Length = 182

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +3

Query: 3   STCATSGEGLYEGLDWLSNNIANKS 77
           STCATSGEGLYEGLDWLSNNIANK+
Sbjct: 136 STCATSGEGLYEGLDWLSNNIANKA 160


>gb|AAF65512.1| ADP-ribosylation factor [Capsicum annuum]
           gi|37791223|gb|AAR03592.1| ARF-like small GTPase
           [Brassica juncea]
          Length = 181

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +3

Query: 3   STCATSGEGLYEGLDWLSNNIANKS 77
           STCATSGEGLYEGLDWLSNNIANK+
Sbjct: 157 STCATSGEGLYEGLDWLSNNIANKA 181


Top