BLASTX nr result

ID: Bupleurum21_contig00023713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023713
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37381.3| unnamed protein product [Vitis vinifera]              527   e-147
ref|XP_002263738.1| PREDICTED: DNA replication licensing factor ...   527   e-147
ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   511   e-143
ref|XP_002525825.1| Minichromosome maintenance protein MCM, puta...   508   e-142
ref|NP_179021.3| minichromosome maintenance 9 [Arabidopsis thali...   504   e-140

>emb|CBI37381.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  527 bits (1357), Expect = e-147
 Identities = 269/316 (85%), Positives = 285/316 (90%), Gaps = 2/316 (0%)
 Frame = +3

Query: 3    TNELKSDINIPDDTVMKFKQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG 182
            TNEL+SD++IPD+ +MKFKQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG
Sbjct: 271  TNELRSDMDIPDEVIMKFKQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG 330

Query: 183  GVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVIXXXXXXXXXXXXXXAV 362
            GVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVI              AV
Sbjct: 331  GVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGFGSTSAGLTVTAV 390

Query: 363  RDAGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTTLSTR 542
            RD GEWMLEAGALVLADGGLCCIDEF+SMREHDRATIHEAMEQQTISIAKAGLVTTL+TR
Sbjct: 391  RDGGEWMLEAGALVLADGGLCCIDEFNSMREHDRATIHEAMEQQTISIAKAGLVTTLNTR 450

Query: 543  TIVFGATNPKGHYDPELSLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAIVSSHILAEAV 722
            TIVFGATNPKGHYDP  SLSVNTTLSGPL+SRFDIVLVLLDTKNPEWDA+VSSHILAE  
Sbjct: 451  TIVFGATNPKGHYDPGQSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEPE 510

Query: 723  AEKSS--DEDLVDIWPLMMLRRYINYVKASFKPVLTKEAEKVISSYYQLQRRSAAQNAAR 896
              ++   DE+L +IWPL +LRRYI++VK  FKPVLTKEAEKVISSYYQLQRRSA  NAAR
Sbjct: 511  ESENGKRDENLANIWPLPLLRRYIHFVKGYFKPVLTKEAEKVISSYYQLQRRSATHNAAR 570

Query: 897  TTVRMLESLIRLAQAH 944
            TTVRMLESLIRLAQAH
Sbjct: 571  TTVRMLESLIRLAQAH 586


>ref|XP_002263738.1| PREDICTED: DNA replication licensing factor MCM9-like [Vitis
            vinifera]
          Length = 644

 Score =  527 bits (1357), Expect = e-147
 Identities = 269/316 (85%), Positives = 285/316 (90%), Gaps = 2/316 (0%)
 Frame = +3

Query: 3    TNELKSDINIPDDTVMKFKQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG 182
            TNEL+SD++IPD+ +MKFKQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG
Sbjct: 271  TNELRSDMDIPDEVIMKFKQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG 330

Query: 183  GVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVIXXXXXXXXXXXXXXAV 362
            GVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVI              AV
Sbjct: 331  GVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGFGSTSAGLTVTAV 390

Query: 363  RDAGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTTLSTR 542
            RD GEWMLEAGALVLADGGLCCIDEF+SMREHDRATIHEAMEQQTISIAKAGLVTTL+TR
Sbjct: 391  RDGGEWMLEAGALVLADGGLCCIDEFNSMREHDRATIHEAMEQQTISIAKAGLVTTLNTR 450

Query: 543  TIVFGATNPKGHYDPELSLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAIVSSHILAEAV 722
            TIVFGATNPKGHYDP  SLSVNTTLSGPL+SRFDIVLVLLDTKNPEWDA+VSSHILAE  
Sbjct: 451  TIVFGATNPKGHYDPGQSLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEPE 510

Query: 723  AEKSS--DEDLVDIWPLMMLRRYINYVKASFKPVLTKEAEKVISSYYQLQRRSAAQNAAR 896
              ++   DE+L +IWPL +LRRYI++VK  FKPVLTKEAEKVISSYYQLQRRSA  NAAR
Sbjct: 511  ESENGKRDENLANIWPLPLLRRYIHFVKGYFKPVLTKEAEKVISSYYQLQRRSATHNAAR 570

Query: 897  TTVRMLESLIRLAQAH 944
            TTVRMLESLIRLAQAH
Sbjct: 571  TTVRMLESLIRLAQAH 586


>ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 649

 Score =  511 bits (1317), Expect = e-143
 Identities = 260/315 (82%), Positives = 278/315 (88%), Gaps = 1/315 (0%)
 Frame = +3

Query: 3    TNELKSDINIPDDTVMKFKQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG 182
            TNELK++++IPDD +M+F QFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG
Sbjct: 279  TNELKAEVDIPDDIIMQFTQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG 338

Query: 183  GVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVIXXXXXXXXXXXXXXAV 362
            GVQHVD SGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVI              AV
Sbjct: 339  GVQHVDISGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVAAV 398

Query: 363  RDAGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTTLSTR 542
            +D GEWMLEAGALVLADGGLCCIDE DSMREHDRATIHEAMEQQTIS+AKAGLVTTLSTR
Sbjct: 399  KDGGEWMLEAGALVLADGGLCCIDEVDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTR 458

Query: 543  TIVFGATNPKGHYDPELSLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAIVSSHILAEAV 722
            TIVFGATNPKG YDPE  LSVNTTLSGPL+SRFDIVLVLLDTKNPEWDA+VSSHIL E+ 
Sbjct: 459  TIVFGATNPKGQYDPEQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILYESE 518

Query: 723  AEKSS-DEDLVDIWPLMMLRRYINYVKASFKPVLTKEAEKVISSYYQLQRRSAAQNAART 899
             EK   D DL + WPL MLRRYI +VK  F+PVLT+EAE++IS+YYQLQRRSA  NAART
Sbjct: 519  QEKGKRDNDLSNNWPLTMLRRYIQFVKGYFRPVLTQEAEQIISNYYQLQRRSAMDNAART 578

Query: 900  TVRMLESLIRLAQAH 944
            TVRMLESLIRLAQAH
Sbjct: 579  TVRMLESLIRLAQAH 593


>ref|XP_002525825.1| Minichromosome maintenance protein MCM, putative [Ricinus communis]
            gi|223534830|gb|EEF36519.1| Minichromosome maintenance
            protein MCM, putative [Ricinus communis]
          Length = 644

 Score =  508 bits (1308), Expect = e-142
 Identities = 258/315 (81%), Positives = 278/315 (88%), Gaps = 1/315 (0%)
 Frame = +3

Query: 3    TNELKSDINIPDDTVMKFKQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG 182
            +NELKSDI+IP D +MKF+QFWSD KDTPLKGRN IL+GICPQVFGLFTVKLAVALTLIG
Sbjct: 277  SNELKSDIDIPRDVIMKFEQFWSDLKDTPLKGRNTILQGICPQVFGLFTVKLAVALTLIG 336

Query: 183  GVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVIXXXXXXXXXXXXXXAV 362
            GVQHVDASGTK+RGESHLLLVGDPGTGKSQFLKFAAKLSNRSVI              AV
Sbjct: 337  GVQHVDASGTKIRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTGAGLTVTAV 396

Query: 363  RDAGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTTLSTR 542
            +D GEWMLEAGALVLADGGLCCIDEFDSMR HDRATIHEAMEQQTIS+AKAGLVTTLSTR
Sbjct: 397  KDGGEWMLEAGALVLADGGLCCIDEFDSMRGHDRATIHEAMEQQTISVAKAGLVTTLSTR 456

Query: 543  TIVFGATNPKGHYDPELSLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAIVSSHILAEAV 722
            TIVFGATNPKG YDP  +LSVNT LSGPL+SRFDIVLVLLDTKNPEWDA+VSSHILAE  
Sbjct: 457  TIVFGATNPKGQYDPYQTLSVNTALSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEKE 516

Query: 723  AEKSSD-EDLVDIWPLMMLRRYINYVKASFKPVLTKEAEKVISSYYQLQRRSAAQNAART 899
            + K ++ +DL +IW L MLRRYI++VK  FKP+LT EAEK+ISSYYQLQRRSA  NAART
Sbjct: 517  SGKGNENDDLANIWTLAMLRRYIHFVKGYFKPILTTEAEKIISSYYQLQRRSATDNAART 576

Query: 900  TVRMLESLIRLAQAH 944
            TVRMLESLIRLAQAH
Sbjct: 577  TVRMLESLIRLAQAH 591


>ref|NP_179021.3| minichromosome maintenance 9 [Arabidopsis thaliana]
            gi|330251181|gb|AEC06275.1| minichromosome maintenance 9
            [Arabidopsis thaliana]
          Length = 646

 Score =  504 bits (1298), Expect = e-140
 Identities = 254/315 (80%), Positives = 279/315 (88%), Gaps = 1/315 (0%)
 Frame = +3

Query: 3    TNELKSDINIPDDTVMKFKQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG 182
            TNELKS+I+I DD + KFK FWS F+DTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG
Sbjct: 277  TNELKSEIDISDDLIEKFKNFWSHFRDTPLKGRNAILRGICPQVFGLFTVKLAVALTLIG 336

Query: 183  GVQHVDASGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVIXXXXXXXXXXXXXXAV 362
            GVQHVDASGTKVRGESHLLL+GDPGTGKSQFLKFAAKLSNR+VI              AV
Sbjct: 337  GVQHVDASGTKVRGESHLLLIGDPGTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVTAV 396

Query: 363  RDAGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISIAKAGLVTTLSTR 542
            +D GEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQ+IS+AKAGLVTTLST+
Sbjct: 397  KDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQSISVAKAGLVTTLSTK 456

Query: 543  TIVFGATNPKGHYDPELSLSVNTTLSGPLISRFDIVLVLLDTKNPEWDAIVSSHILAEAV 722
            TIVFGATNPKG YDP+ SLSVNT LSGPL+SRFDIVLVLLDTKNPEWDA+VSSHILAE  
Sbjct: 457  TIVFGATNPKGQYDPDQSLSVNTALSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILAEVQ 516

Query: 723  AEKSSD-EDLVDIWPLMMLRRYINYVKASFKPVLTKEAEKVISSYYQLQRRSAAQNAART 899
             E+  + +DL  IWPL ML+RYI +VK +F+PVL+KEAE++ISSYY+LQRRS+  NAART
Sbjct: 517  IEQDREVDDLTTIWPLPMLQRYIQFVKKNFRPVLSKEAEEIISSYYRLQRRSSTHNAART 576

Query: 900  TVRMLESLIRLAQAH 944
            TVRMLESLIRLAQAH
Sbjct: 577  TVRMLESLIRLAQAH 591


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