BLASTX nr result

ID: Bupleurum21_contig00023710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023710
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632275.1| PREDICTED: uncharacterized protein LOC100854...    84   3e-19
emb|CBI17196.3| unnamed protein product [Vitis vinifera]               84   3e-19
ref|XP_002517455.1| hypothetical protein RCOM_0854030 [Ricinus c...    85   4e-19
ref|XP_004140284.1| PREDICTED: uncharacterized protein LOC101208...    80   4e-17
ref|XP_004156345.1| PREDICTED: uncharacterized protein LOC101228...    80   4e-17

>ref|XP_003632275.1| PREDICTED: uncharacterized protein LOC100854476 [Vitis vinifera]
          Length = 341

 Score = 83.6 bits (205), Expect(2) = 3e-19
 Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = +1

Query: 61  CMFQELVECLVGMKVSIVTEADETRISAVHQSTGYCFSLTCIKNSHGEG-EWVYRVLSLG 237
           C+FQ LVE LVGMK+S V E D   ISA+HQS+GY FSLT +  + GE  E +YRV SLG
Sbjct: 246 CLFQALVEFLVGMKLSAVREPDGKCISALHQSSGYSFSLTWVNKAAGEEMELLYRVQSLG 305

Query: 238 TLERIAPEWMKE 273
           T ER+AP WM++
Sbjct: 306 TFERVAPGWMRD 317



 Score = 36.6 bits (83), Expect(2) = 3e-19
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +3

Query: 273 VIKFSSNMCPVFFERMSRV 329
           V+ FS+NMCPVFFER+SRV
Sbjct: 318 VLMFSTNMCPVFFERVSRV 336


>emb|CBI17196.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score = 83.6 bits (205), Expect(2) = 3e-19
 Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = +1

Query: 61  CMFQELVECLVGMKVSIVTEADETRISAVHQSTGYCFSLTCIKNSHGEG-EWVYRVLSLG 237
           C+FQ LVE LVGMK+S V E D   ISA+HQS+GY FSLT +  + GE  E +YRV SLG
Sbjct: 219 CLFQALVEFLVGMKLSAVREPDGKCISALHQSSGYSFSLTWVNKAAGEEMELLYRVQSLG 278

Query: 238 TLERIAPEWMKE 273
           T ER+AP WM++
Sbjct: 279 TFERVAPGWMRD 290



 Score = 36.6 bits (83), Expect(2) = 3e-19
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +3

Query: 273 VIKFSSNMCPVFFERMSRV 329
           V+ FS+NMCPVFFER+SRV
Sbjct: 291 VLMFSTNMCPVFFERVSRV 309


>ref|XP_002517455.1| hypothetical protein RCOM_0854030 [Ricinus communis]
           gi|223543466|gb|EEF44997.1| hypothetical protein
           RCOM_0854030 [Ricinus communis]
          Length = 366

 Score = 84.7 bits (208), Expect(2) = 4e-19
 Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = +1

Query: 61  CMFQELVECLVGMKVSIVTEADETRISAVHQSTGYCFSLTCIKNSHG-EGEWVYRVLSLG 237
           C FQ L+ECL+GMK+S   + +E  +SA+HQS+GY FSLT +K + G E E +YR  +LG
Sbjct: 271 CQFQALIECLLGMKLSTANQTEEICVSALHQSSGYSFSLTWVKKAAGQEPELLYRPSTLG 330

Query: 238 TLERIAPEWMK 270
           T ER+APEWM+
Sbjct: 331 TFERVAPEWMR 341



 Score = 34.7 bits (78), Expect(2) = 4e-19
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = +3

Query: 273 VIKFSSNMCPVFFERMSRVNNFIVGRHC 356
           VIKFS++MCP+FFER++ V    +  HC
Sbjct: 343 VIKFSTSMCPIFFERVASV----IKMHC 366


>ref|XP_004140284.1| PREDICTED: uncharacterized protein LOC101208218 [Cucumis sativus]
          Length = 299

 Score = 79.7 bits (195), Expect(2) = 4e-17
 Identities = 40/71 (56%), Positives = 50/71 (70%)
 Frame = +1

Query: 61  CMFQELVECLVGMKVSIVTEADETRISAVHQSTGYCFSLTCIKNSHGEGEWVYRVLSLGT 240
           C +Q LVE ++GM+VS     +   ISA H+S+GY FSLT +    GE E +YRVLSLGT
Sbjct: 204 CPYQCLVEHMMGMEVSTTNRNEGICISAFHKSSGYSFSLTWVNKLIGETEILYRVLSLGT 263

Query: 241 LERIAPEWMKE 273
            ER+APEWMKE
Sbjct: 264 FERVAPEWMKE 274



 Score = 33.1 bits (74), Expect(2) = 4e-17
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +3

Query: 261 MDERVIKFSSNMCPVFFERMSRVNNFIVGRHC 356
           M E  I FS++MCP FFE+++RV    +  HC
Sbjct: 272 MKEEAIIFSTSMCPTFFEKVTRV----IKLHC 299


>ref|XP_004156345.1| PREDICTED: uncharacterized protein LOC101228100 [Cucumis sativus]
          Length = 234

 Score = 79.7 bits (195), Expect(2) = 4e-17
 Identities = 40/71 (56%), Positives = 50/71 (70%)
 Frame = +1

Query: 61  CMFQELVECLVGMKVSIVTEADETRISAVHQSTGYCFSLTCIKNSHGEGEWVYRVLSLGT 240
           C +Q LVE ++GM+VS     +   ISA H+S+GY FSLT +    GE E +YRVLSLGT
Sbjct: 139 CPYQCLVEHMMGMEVSTTNRNEGICISAFHKSSGYSFSLTWVNKLIGETEILYRVLSLGT 198

Query: 241 LERIAPEWMKE 273
            ER+APEWMKE
Sbjct: 199 FERVAPEWMKE 209



 Score = 33.1 bits (74), Expect(2) = 4e-17
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +3

Query: 261 MDERVIKFSSNMCPVFFERMSRVNNFIVGRHC 356
           M E  I FS++MCP FFE+++RV    +  HC
Sbjct: 207 MKEEAIIFSTSMCPTFFEKVTRV----IKLHC 234


Top