BLASTX nr result

ID: Bupleurum21_contig00023704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023704
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278499.2| PREDICTED: WD repeat-containing protein 26-l...    68   7e-10
emb|CBI22069.3| unnamed protein product [Vitis vinifera]               68   7e-10
emb|CBI35349.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002270103.1| PREDICTED: WD repeat-containing protein 26 [...    67   1e-09
ref|XP_004149517.1| PREDICTED: WD repeat-containing protein 26-l...    65   7e-09

>ref|XP_002278499.2| PREDICTED: WD repeat-containing protein 26-like [Vitis vinifera]
          Length = 299

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 278 NCVSWHPTNPHMLASASDDGTIRIWGLD--NPKRKGXXXXXTNQCNG 144
           NCVSW+P NPHMLASASDD TIRIWGL+  N KRKG     T+ CNG
Sbjct: 251 NCVSWNPANPHMLASASDDRTIRIWGLNKINMKRKGTHPNGTHYCNG 297


>emb|CBI22069.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 278 NCVSWHPTNPHMLASASDDGTIRIWGLD--NPKRKGXXXXXTNQCNG 144
           NCVSW+P NPHMLASASDD TIRIWGL+  N KRKG     T+ CNG
Sbjct: 419 NCVSWNPANPHMLASASDDRTIRIWGLNKINMKRKGTHPNGTHYCNG 465


>emb|CBI35349.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/55 (61%), Positives = 37/55 (67%)
 Frame = -3

Query: 278 NCVSWHPTNPHMLASASDDGTIRIWGLDNPKRKGXXXXXTNQCNGKVHHQPNGRT 114
           NCVSW PTNPHMLAS SDD TIRIWGLD  K K       NQ NG ++H   G+T
Sbjct: 492 NCVSWSPTNPHMLASGSDDYTIRIWGLDQVKLKN----RDNQRNG-INHHSKGKT 541


>ref|XP_002270103.1| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
          Length = 586

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/55 (61%), Positives = 37/55 (67%)
 Frame = -3

Query: 278 NCVSWHPTNPHMLASASDDGTIRIWGLDNPKRKGXXXXXTNQCNGKVHHQPNGRT 114
           NCVSW PTNPHMLAS SDD TIRIWGLD  K K       NQ NG ++H   G+T
Sbjct: 537 NCVSWSPTNPHMLASGSDDYTIRIWGLDQVKLKN----RDNQRNG-INHHSKGKT 586


>ref|XP_004149517.1| PREDICTED: WD repeat-containing protein 26-like [Cucumis sativus]
          Length = 584

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/47 (65%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
 Frame = -3

Query: 278 NCVSWHPTNPHMLASASDDGTIRIWGLD--NPKRKGXXXXXTNQCNG 144
           NCVSW+PTNPHMLASASDD TIRIWGL   N KR        + CNG
Sbjct: 534 NCVSWNPTNPHMLASASDDHTIRIWGLKGLNIKRNNAYSNGVHYCNG 580


Top