BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023701
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...   142   1e-31
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...   141   2e-31
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   134   3e-29
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   134   3e-29
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   133   8e-29

>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score =  142 bits (358), Expect = 1e-31
 Identities = 86/298 (28%), Positives = 132/298 (44%), Gaps = 8/298 (2%)
 Frame = -3

Query: 967 WDVDRVKESFHEVDAKAILTVPIPQRDVEDRVAWVRTKEGQYSVKTGYQLWHXXXXXXXX 788
           W+   V   F+  DA AIL++P+  R + D   W  T  G Y+VK+ Y++          
Sbjct: 49  WNQQIVTSIFNPQDAAAILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRICSDLLHPHDS 108

Query: 787 XXXXXGWKRIWKLAVPHKVKVFLWRFCRNNLPVRRRLRSKGVPITILCPMCTYDIEHLLH 608
                 W  IW L +PH+V+ FLWR   N LP R  L ++G+     C M     E   H
Sbjct: 109 AHNNSSWMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFENFAECHTH 168

Query: 607 VFFDCQFATQCWNHVGLSYDMLTVEYAQEWLLNKLKTASDDEMIRIAG--------VLWG 452
           +FF C  A  CW ++GL   +  +      L N   T   D M R+          +LW 
Sbjct: 169 LFFVCAKAMDCWKNIGLHVVLSELLP----LANNFTTLLFDFMHRLCSQQQQAAGMLLWS 224

Query: 451 IWHWRNKKVWENAQVTAATAMDWSSKMLADWKNANADRGKXXXXXXXXXGSGVQRWKPPE 272
           +W  RN K+W++   T A  +  +   L +W    + + +               W  P 
Sbjct: 225 LWKSRNIKLWDSTDTTTAITISRAKDTLHEWSCMQSAKTQPINPNHHI------SWVKPT 278

Query: 271 EGCFKVNVDASVFEGADSFSIGMVLRNSEGSFVEGKNLCLPNPNSVFEAEALGVSEGI 98
            G  K N+DA++F+   +   G+  RNSE   + GK+  + +  SV EAEA+ + E +
Sbjct: 279 GGMIKCNMDAAIFQNNVAAGYGICCRNSEDELLLGKSAIIHSSLSVLEAEAIVLLEAM 336


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score =  141 bits (356), Expect = 2e-31
 Identities = 85/286 (29%), Positives = 127/286 (44%), Gaps = 17/286 (5%)
 Frame = -3

Query: 916 ILTVPIPQRDVEDRVAWVRTKEGQYSVKTGYQLWHXXXXXXXXXXXXXGWKRIWKLAVPH 737
           IL  P+  +   D + W   K G YSVK+ Y++                W  IW+L VP 
Sbjct: 7   ILNTPLYSQVQTDSLLWKVEKNGCYSVKSAYRVCVEDVVNNAHLRKPGYWSGIWRLKVPP 66

Query: 736 KVKVFLWRFCRNNLPVRRRLRSKGVPITILCPMCTYDIEHLLHVFFDCQFATQCWNHVG- 560
           +VK  +WR CR   P R RL S+GV     C  C    E   H+FF C+ A   WN    
Sbjct: 67  RVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNTANV 126

Query: 559 ---LSYDMLTVEYAQEWLLNKLKTASDDEMIRIAGVLWGIWHWRNKKVWENAQVTAATAM 389
              ++  +   + A + + N L+  S  +M  I  ++W IW  RN K+W+    ++ T +
Sbjct: 127 WHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLWQQVSESSVTIL 186

Query: 388 DWSSKMLADWKNANADRG-------------KXXXXXXXXXGSGVQRWKPPEEGCFKVNV 248
           + +  +L  W+ AN  +G             +           G  RW+ P+ G  K NV
Sbjct: 187 ERAKHLLEGWRKANHKQGLLGQVHSPTNSRPQTHDSQNTDNRYGNIRWRKPKSGRLKCNV 246

Query: 247 DASVFEGADSFSIGMVLRNSEGSFVEGKNLCLPNPNSVFEAEALGV 110
           DAS    ++   IGM +R+SEG+ V  K +       V   EALG+
Sbjct: 247 DASFSTSSNKVGIGMCIRDSEGNHVRSKTMWFSPLCPVNIGEALGL 292


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  134 bits (338), Expect = 3e-29
 Identities = 82/292 (28%), Positives = 124/292 (42%), Gaps = 4/292 (1%)
 Frame = -3

Query: 967  WDVDRVKESFHEVDAKAILTVPIPQRDVEDRVAWVRTKEGQYSVKTGYQLWHXXXXXXXX 788
            W  D +++ F   DA  IL++P+P    ED+++W     G+Y+ ++GY            
Sbjct: 438  WREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTAL 497

Query: 787  XXXXXG----WKRIWKLAVPHKVKVFLWRFCRNNLPVRRRLRSKGVPITILCPMCTYDIE 620
                      W ++WK+  P K+  F WR  RN LP R  L  + V   + CP+C  ++E
Sbjct: 498  VASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELE 557

Query: 619  HLLHVFFDCQFATQCWNHVGLSYDMLTVEYAQEWLLNKLKTASDDEMIRIAGVLWGIWHW 440
              LH   +C  A   W+  GL+          +WL             +   V WG+W  
Sbjct: 558  TTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWR 617

Query: 439  RNKKVWENAQVTAATAMDWSSKMLADWKNANADRGKXXXXXXXXXGSGVQRWKPPEEGCF 260
            RN  VW      +   ++    ML  W +AN               S   +W+ P+ G  
Sbjct: 618  RNDVVWNGRIWHSQQVVNGCFTMLESWFHAN-----ETLATAVTVPSYSSKWQKPDYGWI 672

Query: 259  KVNVDASVFEGADSFSIGMVLRNSEGSFVEGKNLCLPNPNSVFEAEALGVSE 104
            K+NVD +VF   D  +IG V R+ +G F+ G     P+       EALGV E
Sbjct: 673  KINVDGAVF--PDKGAIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVRE 722


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  134 bits (338), Expect = 3e-29
 Identities = 77/293 (26%), Positives = 131/293 (44%)
 Frame = -3

Query: 973  KKWDVDRVKESFHEVDAKAILTVPIPQRDVEDRVAWVRTKEGQYSVKTGYQLWHXXXXXX 794
            ++WD D + + F+  D + I ++P+  R+VED   W+   +G Y VK  Y+L        
Sbjct: 364  RRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLVKNCYRLLQGDLGRP 423

Query: 793  XXXXXXXGWKRIWKLAVPHKVKVFLWRFCRNNLPVRRRLRSKGVPITILCPMCTYDIEHL 614
                    W + WKL +P KV+  +W+ C N +     LR + V +  LC  C  + E L
Sbjct: 424  ETSF----WNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETL 479

Query: 613  LHVFFDCQFATQCWNHVGLSYDMLTVEYAQEWLLNKLKTASDDEMIRIAGVLWGIWHWRN 434
             HV F C  A +CW+ +G  +   T      W+ N      +D   ++A V   +W+ RN
Sbjct: 480  FHVLFGCSMARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRN 539

Query: 433  KKVWENAQVTAATAMDWSSKMLADWKNANADRGKXXXXXXXXXGSGVQRWKPPEEGCFKV 254
              VW     T    +  ++++L     A +   +             ++W  PE G  K+
Sbjct: 540  HWVWNKQSNTTYGVISPANQLLEQRTRAQS-ADEEIAPPLGHNTDVTRKWTKPELGWLKI 598

Query: 253  NVDASVFEGADSFSIGMVLRNSEGSFVEGKNLCLPNPNSVFEAEALGVSEGIN 95
            N D ++F       +G V+R+S G  +  ++       +  EAEAL + E ++
Sbjct: 599  NTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALSMKEALS 651


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  133 bits (334), Expect = 8e-29
 Identities = 86/303 (28%), Positives = 129/303 (42%), Gaps = 5/303 (1%)
 Frame = -3

Query: 1003 SVASWFVPGTKKWDVDRVKESFHEVDAKAILTVPIPQRDVEDRVAWVRTKEGQYSVKTGY 824
            +VA  F+  T+ W+V  ++      D   IL  PI + +   +   + T           
Sbjct: 1362 TVADLFISQTRFWNVGLLRNLVSNEDTNRILNTPIFEPNHLSQHVDLSTHR--------- 1412

Query: 823  QLWHXXXXXXXXXXXXXGWKRIWKLAVPHKVKVFLWRFCRNNLPVRRRLRSKGVPITILC 644
                              W  +W L VP KVK FLWR CRN LP R RL+ +GV  T  C
Sbjct: 1413 --------------CDGNWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTC 1458

Query: 643  PMCTYDIEHLLHVFFDCQFATQCWNHVGL-----SYDMLTVEYAQEWLLNKLKTASDDEM 479
             +C  + E  +H+FF C  + QCW  +GL         L + +    +   L+     + 
Sbjct: 1459 ALCENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVT-MFEILQELDSSQR 1517

Query: 478  IRIAGVLWGIWHWRNKKVWENAQVTAATAMDWSSKMLADWKNANADRGKXXXXXXXXXGS 299
            +  A V+W IW  RN  +W N  +T A   D    +L  W+NA                 
Sbjct: 1518 VIWACVMWSIWKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQ---------------- 1561

Query: 298  GVQRWKPPEEGCFKVNVDASVFEGADSFSIGMVLRNSEGSFVEGKNLCLPNPNSVFEAEA 119
                W+ P+EG FK NVDA+ F+ ++   IG+ +R+  G  V+ +         V E EA
Sbjct: 1562 --DIWRKPDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEA 1619

Query: 118  LGV 110
            +G+
Sbjct: 1620 IGL 1622