BLASTX nr result

ID: Bupleurum21_contig00023700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023700
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511192.1| COMM domain-containing protein, putative [Ri...   256   9e-66
ref|XP_002283737.1| PREDICTED: COMM domain-containing protein 9 ...   247   3e-63
ref|XP_002318724.1| predicted protein [Populus trichocarpa] gi|2...   235   2e-59
ref|XP_003526960.1| PREDICTED: COMM domain-containing protein 9-...   229   1e-57
ref|XP_003523144.1| PREDICTED: uncharacterized protein LOC100781...   228   2e-57

>ref|XP_002511192.1| COMM domain-containing protein, putative [Ricinus communis]
           gi|223550307|gb|EEF51794.1| COMM domain-containing
           protein, putative [Ricinus communis]
          Length = 201

 Score =  256 bits (653), Expect = 9e-66
 Identities = 124/183 (67%), Positives = 149/183 (81%), Gaps = 1/183 (0%)
 Frame = +1

Query: 97  NSIWSNIALVIRAKSKESLEYILQALWRTRKTGLDATDRRLFCQMLDFSNDSDLDPLLVC 276
           ++ W ++ L++RA SKES+EYILQALWRTRKTGLDA DR +  +ML   NDSDLDPLLVC
Sbjct: 3   HTFWGHLPLLVRANSKESVEYILQALWRTRKTGLDAADRHVVSEMLQLQNDSDLDPLLVC 62

Query: 277 LRMLIRRCVYENTNKDEIQKLFPAEVSPEIQRLLTLLLQKFHSEWREDIQKDLSTLPGFK 456
           LRMLIRRCVYEN +KDEIQKLFP+EV PE+QRLLT+LLQKF  EW+ED+ KD  T P  K
Sbjct: 63  LRMLIRRCVYENISKDEIQKLFPSEVLPELQRLLTILLQKFQKEWQEDVFKDQVTFPRLK 122

Query: 457 TMTWNMMNQD-GEMTEPLAVINLKLQTHAHSKTRDTDVKFQIARDNISTMLQSMYSIRDH 633
            MTWNM NQD  EMTEP+AVINLKLQ  A S++ + +VKFQ+A+D + TM++SMY IRD 
Sbjct: 123 AMTWNMANQDTAEMTEPMAVINLKLQNDAPSQSGELEVKFQLAKDTLETMVKSMYCIRDQ 182

Query: 634 LSD 642
           LSD
Sbjct: 183 LSD 185


>ref|XP_002283737.1| PREDICTED: COMM domain-containing protein 9 [Vitis vinifera]
           gi|297734414|emb|CBI15661.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  247 bits (631), Expect = 3e-63
 Identities = 118/182 (64%), Positives = 144/182 (79%)
 Frame = +1

Query: 97  NSIWSNIALVIRAKSKESLEYILQALWRTRKTGLDATDRRLFCQMLDFSNDSDLDPLLVC 276
           +++W ++ L++ + SKES+EYILQALWRTRKTGLDATDR    +ML   N SDLDPLLVC
Sbjct: 3   HTVWGHLPLLVNSNSKESVEYILQALWRTRKTGLDATDRHFISEMLQLPNHSDLDPLLVC 62

Query: 277 LRMLIRRCVYENTNKDEIQKLFPAEVSPEIQRLLTLLLQKFHSEWREDIQKDLSTLPGFK 456
           LRML+R+CVYEN +KDEIQKLFP EV PE+QRLLTLLLQKF  EWRED+  D   +P  K
Sbjct: 63  LRMLMRKCVYENISKDEIQKLFPDEVLPELQRLLTLLLQKFQREWREDVLNDQVIMPRLK 122

Query: 457 TMTWNMMNQDGEMTEPLAVINLKLQTHAHSKTRDTDVKFQIARDNISTMLQSMYSIRDHL 636
            MTWNM NQ+ EM +P+AVINLKLQ  A S + + +VKFQ+ +D + TML+SMYSIRD L
Sbjct: 123 AMTWNMANQETEMLDPVAVINLKLQNDAQSHSGELEVKFQLDKDTLETMLKSMYSIRDQL 182

Query: 637 SD 642
           SD
Sbjct: 183 SD 184


>ref|XP_002318724.1| predicted protein [Populus trichocarpa] gi|222859397|gb|EEE96944.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  235 bits (599), Expect = 2e-59
 Identities = 118/185 (63%), Positives = 145/185 (78%), Gaps = 3/185 (1%)
 Frame = +1

Query: 97  NSIWSNIALVIRAKSKESLEYILQALWRTRKTGLDATDRRLFCQMLDFSNDSDLDPLLVC 276
           +S+W+++ L++RA SKES+EYILQALWRTR+TGLD+ DR +   +L   ND+DLDPLLVC
Sbjct: 3   HSLWNHLPLLVRANSKESVEYILQALWRTRQTGLDSADRLVISDILQLPNDTDLDPLLVC 62

Query: 277 LRMLIRRCVYENTNKDEIQKLFPAEVSPEIQRLLTLLLQKFHSEWREDIQKDLSTLPGFK 456
           LRMLIRRCVYEN +KD+IQKLFP EV PE+QRLLTLLLQKF +EWR D+ KD    P  K
Sbjct: 63  LRMLIRRCVYENVSKDDIQKLFPEEVLPELQRLLTLLLQKFQTEWRADVFKDQVDFPRLK 122

Query: 457 TMTWNMMNQD-GEMTEPLAVINLKLQ--THAHSKTRDTDVKFQIARDNISTMLQSMYSIR 627
            MTWNM NQD  E T+P+AVINLKLQ  T +HS     +VKFQ+ +D + TM++SMY IR
Sbjct: 123 AMTWNMANQDAAEGTDPVAVINLKLQDDTQSHS-----EVKFQLGKDTLETMVKSMYCIR 177

Query: 628 DHLSD 642
           D LSD
Sbjct: 178 DQLSD 182


>ref|XP_003526960.1| PREDICTED: COMM domain-containing protein 9-like [Glycine max]
          Length = 192

 Score =  229 bits (583), Expect = 1e-57
 Identities = 109/180 (60%), Positives = 138/180 (76%)
 Frame = +1

Query: 100 SIWSNIALVIRAKSKESLEYILQALWRTRKTGLDATDRRLFCQMLDFSNDSDLDPLLVCL 279
           +IW ++ +++RA SKES+EYILQALWRTRKTGL  TDR +  +ML   N+SDLDPLLVCL
Sbjct: 4   TIWGHLPVLVRANSKESIEYILQALWRTRKTGLGTTDRCIIQEMLQLQNESDLDPLLVCL 63

Query: 280 RMLIRRCVYENTNKDEIQKLFPAEVSPEIQRLLTLLLQKFHSEWREDIQKDLSTLPGFKT 459
           RMLIRRCVYENT+K++I KLFP+EV PE+Q+LLTLLL KF  EW+ED+ KD + +P  K 
Sbjct: 64  RMLIRRCVYENTSKEDIPKLFPSEVLPELQKLLTLLLHKFQREWQEDVMKDQNIVPRLKA 123

Query: 460 MTWNMMNQDGEMTEPLAVINLKLQTHAHSKTRDTDVKFQIARDNISTMLQSMYSIRDHLS 639
           MTWNM N D E  +P AVINLKLQ      + + DVKF++A D+I  ML++M+ IRD  S
Sbjct: 124 MTWNMANLDKESADPAAVINLKLQNDGQFHSGEQDVKFKLATDSIDMMLKAMHCIRDQFS 183


>ref|XP_003523144.1| PREDICTED: uncharacterized protein LOC100781168 [Glycine max]
          Length = 192

 Score =  228 bits (581), Expect = 2e-57
 Identities = 109/180 (60%), Positives = 139/180 (77%)
 Frame = +1

Query: 100 SIWSNIALVIRAKSKESLEYILQALWRTRKTGLDATDRRLFCQMLDFSNDSDLDPLLVCL 279
           +IW ++ +++RA SKES+EYILQALWRTRKTGL  T+R +  +ML   N+SDLDPLLVCL
Sbjct: 4   TIWGHLPVLVRANSKESIEYILQALWRTRKTGLGTTERCIIQEMLQLQNESDLDPLLVCL 63

Query: 280 RMLIRRCVYENTNKDEIQKLFPAEVSPEIQRLLTLLLQKFHSEWREDIQKDLSTLPGFKT 459
           RMLIRRCVYENT+K++I KLFP+EV PE+Q+LL LLL KF  EW+ED+ KD + +P  KT
Sbjct: 64  RMLIRRCVYENTSKEDIPKLFPSEVLPELQKLLMLLLHKFQQEWQEDVMKDQTIVPQLKT 123

Query: 460 MTWNMMNQDGEMTEPLAVINLKLQTHAHSKTRDTDVKFQIARDNISTMLQSMYSIRDHLS 639
           MTWNM N D E  +P AVINLKLQ  A   + + D+KFQ+A D+I  ML++M+ IRD  S
Sbjct: 124 MTWNMANLDKESADPAAVINLKLQNDALFHSGEQDMKFQLATDSIDMMLKAMHCIRDQFS 183


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