BLASTX nr result

ID: Bupleurum21_contig00023682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023682
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300588.1| actin related protein [Populus trichocarpa] ...   284   1e-74
ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vi...   269   5e-70
emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]   269   5e-70
ref|XP_002866129.1| hypothetical protein ARALYDRAFT_495706 [Arab...   262   6e-68
gb|AAM53249.1|AF507917_1 actin-related protein 8A [Arabidopsis t...   260   2e-67

>ref|XP_002300588.1| actin related protein [Populus trichocarpa]
           gi|222847846|gb|EEE85393.1| actin related protein
           [Populus trichocarpa]
          Length = 473

 Score =  284 bits (727), Expect = 1e-74
 Identities = 134/215 (62%), Positives = 171/215 (79%), Gaps = 4/215 (1%)
 Frame = -2

Query: 633 LLRKVWESVSNRCTANKSVRLPDG----AYTDNNNNMYIHIYSTGGGAFDRIPLDIFIQI 466
           LL+KVWESVSNR T+  S  +       +YT++++++         GAFDR+P+D+ +QI
Sbjct: 4   LLKKVWESVSNRATSFSSSSIDSVTTPLSYTESSSSL---------GAFDRLPIDVVLQI 54

Query: 465 LKLLGPKEVAKLSVVCKYWKFIVSDNRLWIYFLQNQHQPWESIFFAETNLRSGYDRLTYP 286
           ++L+GPK+ A+LSVVCK W+ +VSDNRLWIYFLQN H  W+S+FF ET+LRSGY   T+ 
Sbjct: 55  VRLVGPKDAARLSVVCKSWRPLVSDNRLWIYFLQNYHDTWDSVFFVETHLRSGYPIQTFS 114

Query: 285 IQMPELSFMHIYGQRATVPGAIIIDGGSGYCKYGWSKYNSPSGRSATFLEFGNIESPLYS 106
             + ELSFM IYGQR  VPGA+I+DGGSG+CKYGWSK   PSGRSATFLEFGNIESP+YS
Sbjct: 115 SPITELSFMRIYGQRVQVPGAVIVDGGSGHCKYGWSKNACPSGRSATFLEFGNIESPMYS 174

Query: 105 RLRNFYATIYSRMQVKSSTQPVVVSIPICHYDDTE 1
           RL++F+ATIYSRMQVK+S  P+VVS+P+CHYDDTE
Sbjct: 175 RLQHFFATIYSRMQVKASAHPIVVSLPLCHYDDTE 209


>ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vinifera]
           gi|296090034|emb|CBI39853.3| unnamed protein product
           [Vitis vinifera]
          Length = 473

 Score =  269 bits (687), Expect = 5e-70
 Identities = 133/214 (62%), Positives = 165/214 (77%), Gaps = 3/214 (1%)
 Frame = -2

Query: 633 LLRKVWESVSNRCTANKSVRLPDGAYTDNNNNMYIHIYSTGGGAFDRIPLDIFIQILKLL 454
           LLRKVWESVS    A           T  +++  + + S+ G AF  IP D+F+ IL+ L
Sbjct: 4   LLRKVWESVSRSSKA-----------TSESSDRRVVVQSSTG-AFSHIPFDVFMHILQFL 51

Query: 453 GPKEVAKLSVVCKYWKFIVSDNRLWIYFLQN-QHQP--WESIFFAETNLRSGYDRLTYPI 283
            P+EVAKLS+VCKYWKF+VSDN+LW+Y LQ  Q+QP  W+S+ FAET+L+ GY  LT+  
Sbjct: 52  EPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAETHLQMGYPLLTFND 111

Query: 282 QMPELSFMHIYGQRATVPGAIIIDGGSGYCKYGWSKYNSPSGRSATFLEFGNIESPLYSR 103
           QMP+LSFMHI+G+RA  PGAIIIDGGSGYCKYGWSKY++ +G SATFLEFGNIE+P+YSR
Sbjct: 112 QMPQLSFMHIFGRRAKAPGAIIIDGGSGYCKYGWSKYDTTTGMSATFLEFGNIETPIYSR 171

Query: 102 LRNFYATIYSRMQVKSSTQPVVVSIPICHYDDTE 1
           LR+F ATIYSRM VK S QP+V+S+PICHYDD E
Sbjct: 172 LRHFLATIYSRMHVKPSAQPIVLSVPICHYDDNE 205


>emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]
          Length = 451

 Score =  269 bits (687), Expect = 5e-70
 Identities = 133/214 (62%), Positives = 165/214 (77%), Gaps = 3/214 (1%)
 Frame = -2

Query: 633 LLRKVWESVSNRCTANKSVRLPDGAYTDNNNNMYIHIYSTGGGAFDRIPLDIFIQILKLL 454
           LLRKVWESVS    A           T  +++  + + S+ G AF  IP D+F+ IL+ L
Sbjct: 4   LLRKVWESVSRSSKA-----------TSESSDRRVVVQSSTG-AFSHIPFDVFMHILQFL 51

Query: 453 GPKEVAKLSVVCKYWKFIVSDNRLWIYFLQN-QHQP--WESIFFAETNLRSGYDRLTYPI 283
            P+EVAKLS+VCKYWKF+VSDN+LW+Y LQ  Q+QP  W+S+ FAET+L+ GY  LT+  
Sbjct: 52  EPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAETHLQMGYPLLTFND 111

Query: 282 QMPELSFMHIYGQRATVPGAIIIDGGSGYCKYGWSKYNSPSGRSATFLEFGNIESPLYSR 103
           QMP+LSFMHI+G+RA  PGAIIIDGGSGYCKYGWSKY++ +G SATFLEFGNIE+P+YSR
Sbjct: 112 QMPQLSFMHIFGRRAKAPGAIIIDGGSGYCKYGWSKYDTTTGMSATFLEFGNIETPIYSR 171

Query: 102 LRNFYATIYSRMQVKSSTQPVVVSIPICHYDDTE 1
           LR+F ATIYSRM VK S QP+V+S+PICHYDD E
Sbjct: 172 LRHFLATIYSRMHVKPSAQPIVLSVPICHYDDNE 205


>ref|XP_002866129.1| hypothetical protein ARALYDRAFT_495706 [Arabidopsis lyrata subsp.
           lyrata] gi|297311964|gb|EFH42388.1| hypothetical protein
           ARALYDRAFT_495706 [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score =  262 bits (669), Expect = 6e-68
 Identities = 125/211 (59%), Positives = 159/211 (75%)
 Frame = -2

Query: 633 LLRKVWESVSNRCTANKSVRLPDGAYTDNNNNMYIHIYSTGGGAFDRIPLDIFIQILKLL 454
           +LRKVW SV NR  + K       A T     + +   S+  GAFD++P+DI +QIL ++
Sbjct: 2   ILRKVWGSVWNRSNSGKDSVCHQRAMTHVAPPLLLSS-SSSLGAFDQLPMDILVQILMMM 60

Query: 453 GPKEVAKLSVVCKYWKFIVSDNRLWIYFLQNQHQPWESIFFAETNLRSGYDRLTYPIQMP 274
            P++  KL + CK WK + + NRLWI++LQ   +PW+SIFFAET+LRSGY       Q  
Sbjct: 61  EPRDAVKLGLTCKTWKCVAAGNRLWIFYLQCSQEPWDSIFFAETSLRSGYPLRMISSQSG 120

Query: 273 ELSFMHIYGQRATVPGAIIIDGGSGYCKYGWSKYNSPSGRSATFLEFGNIESPLYSRLRN 94
           ELSFMHIY QRA VPG+IIIDGGSGYCK+GWSKY SPSGRSATFLEFGNIESP+Y+RL++
Sbjct: 121 ELSFMHIYSQRAQVPGSIIIDGGSGYCKFGWSKYASPSGRSATFLEFGNIESPIYARLQH 180

Query: 93  FYATIYSRMQVKSSTQPVVVSIPICHYDDTE 1
           F+ATI++RMQVK S QP+VVS+P+CH+DDTE
Sbjct: 181 FFATIFTRMQVKPSMQPIVVSLPLCHFDDTE 211


>gb|AAM53249.1|AF507917_1 actin-related protein 8A [Arabidopsis thaliana]
          Length = 241

 Score =  260 bits (665), Expect = 2e-67
 Identities = 126/217 (58%), Positives = 160/217 (73%), Gaps = 6/217 (2%)
 Frame = -2

Query: 633 LLRKVWESVSNRCTANKSVRLPDGAYTDNNNNMYIHI------YSTGGGAFDRIPLDIFI 472
           +L+KVW SV NR  + K +          N++  I +       S+  GAFD++P+DI +
Sbjct: 2   ILKKVWGSVWNRSNSGKDLV---------NHHRAIDVPPLLLSSSSSLGAFDQLPMDILV 52

Query: 471 QILKLLGPKEVAKLSVVCKYWKFIVSDNRLWIYFLQNQHQPWESIFFAETNLRSGYDRLT 292
           QIL ++ PK+  KL + CK WK + S NRLWI++LQ   +PW+SIFFAET+LRSGY    
Sbjct: 53  QILMMMEPKDAVKLGLTCKAWKCVASGNRLWIFYLQCSQEPWDSIFFAETSLRSGYPLRM 112

Query: 291 YPIQMPELSFMHIYGQRATVPGAIIIDGGSGYCKYGWSKYNSPSGRSATFLEFGNIESPL 112
              Q  ELSFMHIY QRA VPG+IIIDGGSGYCK+GWSKY SPSGRSATFLEFGNIESP+
Sbjct: 113 ISSQSGELSFMHIYSQRAQVPGSIIIDGGSGYCKFGWSKYASPSGRSATFLEFGNIESPI 172

Query: 111 YSRLRNFYATIYSRMQVKSSTQPVVVSIPICHYDDTE 1
           Y+RL+ F+ATI++RMQVK S QP+VVS+P+CH+DDTE
Sbjct: 173 YARLQQFFATIFTRMQVKPSMQPIVVSLPLCHFDDTE 209


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