BLASTX nr result

ID: Bupleurum21_contig00023670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023670
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596211.1| Ubiquitin carboxyl-terminal hydrolase [Medic...    68   2e-09
ref|XP_002530131.1| conserved hypothetical protein [Ricinus comm...    68   2e-09
ref|XP_002317364.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07

>ref|XP_003596211.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355485259|gb|AES66462.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 983

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 38/88 (43%), Positives = 50/88 (56%)
 Frame = +2

Query: 425 CSPEGISTNKSIKAKSASHLPGTKMHRLSRPKSGASFELSSPDMEIKDQLVDDSKVGRPR 604
           CS E  +   S KAK  SH    K+ +  +  S  S +   P++E K ++ D+ KV   R
Sbjct: 336 CSSE-TTVKGSAKAKKPSHTSKAKLSKSPKSTSKTSIDFCDPEIEKKGKIPDEPKVAGSR 394

Query: 605 STAPSWGGDGVPSTGFMKMVGLMKSTKH 688
           ST P  G +GV STG MKM+GL KSTKH
Sbjct: 395 STLPLHGINGVTSTGLMKMMGLRKSTKH 422


>ref|XP_002530131.1| conserved hypothetical protein [Ricinus communis]
           gi|223530356|gb|EEF32247.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 870

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 47/111 (42%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = +2

Query: 356 DMVVSGGSSVLEENTCN-QKVPLNCSPEGISTNKSIKAKSASHLPGTKMHRLSRPKSGAS 532
           D   +GG+    EN  N Q V LNCS E     ++ +AK AS   GTK+ + S+      
Sbjct: 274 DFTWNGGNMPNVENNLNDQTVELNCSYEAPVMKENERAKFASQPTGTKISKSSKSTMKVF 333

Query: 533 FELSSPDMEIKDQLVDDSKVGRPRSTAPSWGGDGVPSTGFMKMVGLMKSTK 685
            E S   +E K    DDSK  R R   P+ G +GV STG MKMVGL KS K
Sbjct: 334 AEPSYTGVEEKGLSGDDSKDVRMRHAIPAPGSNGVASTGIMKMVGLRKSAK 384


>ref|XP_002317364.1| predicted protein [Populus trichocarpa] gi|222860429|gb|EEE97976.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 37/87 (42%), Positives = 50/87 (57%)
 Frame = +2

Query: 425 CSPEGISTNKSIKAKSASHLPGTKMHRLSRPKSGASFELSSPDMEIKDQLVDDSKVGRPR 604
           C  E   TN ++KA +A H  G K  + S+ K   S + S   ++ K QL DDSKV R R
Sbjct: 256 CYYETPVTNGNVKANTALHPMGNKSLKSSKSKMKFSGDQSYFKIDGKGQLTDDSKVARMR 315

Query: 605 STAPSWGGDGVPSTGFMKMVGLMKSTK 685
           +  P+ G +GV S G MKM+ L KS+K
Sbjct: 316 NANPAAGTNGVTSIGIMKMMDLRKSSK 342


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