BLASTX nr result

ID: Bupleurum21_contig00023669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023669
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23090.3| unnamed protein product [Vitis vinifera]              120   3e-25
ref|XP_003634174.1| PREDICTED: two-component response regulator-...   120   3e-25
ref|XP_002524429.1| conserved hypothetical protein [Ricinus comm...   114   2e-23
gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]          114   2e-23
ref|XP_002321351.1| response regulator [Populus trichocarpa] gi|...   112   6e-23

>emb|CBI23090.3| unnamed protein product [Vitis vinifera]
          Length = 747

 Score =  120 bits (300), Expect = 3e-25
 Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 12/134 (8%)
 Frame = +1

Query: 34  NIASAQLKHRKSYDLEPIKDQTHLSSVSDQHGGGDFSNDISNRFNS-----------RSN 180
           N +++Q  H+  + L+ ++ Q H S  +DQ+    F N  ++  NS            +N
Sbjct: 471 NNSTSQTNHKPEHKLDSLEGQGHFSPATDQNSSSSFGNGGASNLNSFGCGSICGSNGNAN 530

Query: 181 AVQFVKVAAENGKESNLI-HDEKFQRSIQREAALAKFRLKRKERCFDKKVRYHSRSRLAE 357
            V  V+ AAE   E  +  H+   QRSIQREAAL KFRLKRK+RCF+KKVRY SR +LAE
Sbjct: 531 TVAVVQAAAEGKNEEGIFSHEGHSQRSIQREAALTKFRLKRKDRCFEKKVRYESRKKLAE 590

Query: 358 KRPRVKGQFVRQVH 399
           +RPRVKGQFVRQVH
Sbjct: 591 QRPRVKGQFVRQVH 604


>ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
           vinifera]
          Length = 688

 Score =  120 bits (300), Expect = 3e-25
 Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 12/134 (8%)
 Frame = +1

Query: 34  NIASAQLKHRKSYDLEPIKDQTHLSSVSDQHGGGDFSNDISNRFNS-----------RSN 180
           N +++Q  H+  + L+ ++ Q H S  +DQ+    F N  ++  NS            +N
Sbjct: 537 NNSTSQTNHKPEHKLDSLEGQGHFSPATDQNSSSSFGNGGASNLNSFGCGSICGSNGNAN 596

Query: 181 AVQFVKVAAENGKESNLI-HDEKFQRSIQREAALAKFRLKRKERCFDKKVRYHSRSRLAE 357
            V  V+ AAE   E  +  H+   QRSIQREAAL KFRLKRK+RCF+KKVRY SR +LAE
Sbjct: 597 TVAVVQAAAEGKNEEGIFSHEGHSQRSIQREAALTKFRLKRKDRCFEKKVRYESRKKLAE 656

Query: 358 KRPRVKGQFVRQVH 399
           +RPRVKGQFVRQVH
Sbjct: 657 QRPRVKGQFVRQVH 670


>ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
           gi|223536313|gb|EEF37964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score =  114 bits (285), Expect = 2e-23
 Identities = 64/131 (48%), Positives = 84/131 (64%), Gaps = 10/131 (7%)
 Frame = +1

Query: 61  RKSYDLEPIKDQTHLSSVSDQHGGGDFSNDISNRFN--------SRSNAVQF--VKVAAE 210
           ++  +L+P +D+ H+S  +DQ     F N  ++  N        S SN  Q   V+VAAE
Sbjct: 538 KQDKELDPPEDRGHISPTTDQSATSSFYNGAASHLNMGYGSHSGSNSNVDQVANVRVAAE 597

Query: 211 NGKESNLIHDEKFQRSIQREAALAKFRLKRKERCFDKKVRYHSRSRLAEKRPRVKGQFVR 390
              E + +H+    RSIQREAAL KFRLKRK+RC++KKVRY SR +LAE+RPRVKGQFVR
Sbjct: 598 RKNEESTLHNANSHRSIQREAALNKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVR 657

Query: 391 QVHL*QLETDK 423
           Q H    ETD+
Sbjct: 658 QAHP-SAETDQ 667


>gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
          Length = 698

 Score =  114 bits (284), Expect = 2e-23
 Identities = 67/145 (46%), Positives = 88/145 (60%), Gaps = 12/145 (8%)
 Frame = +1

Query: 4   QESMQYMMDQNIASAQLKHRKSYDLEPIKDQTHLSSVSDQHGGGDFSNDISNRFNS---- 171
           Q+   +  + N A+ Q  +++ + L+P++D+ HLSS +DQ     F N   +  NS    
Sbjct: 540 QQCDPHGQNTNDAANQNVYKQEHKLDPLEDRGHLSSATDQSASSSFCNGGVSHHNSIGYG 599

Query: 172 -----RSNA--VQFVKVAAENGKESNLI-HDEKFQRSIQREAALAKFRLKRKERCFDKKV 327
                 SN   V FV  A E+  E      +    RS QREAALAKFRLKRKERC++KKV
Sbjct: 600 SGCGSNSNVDHVAFVGAAPESKNEEGFYPQNGSAHRSFQREAALAKFRLKRKERCYEKKV 659

Query: 328 RYHSRSRLAEKRPRVKGQFVRQVHL 402
           RY SR +LAE+RPRVKGQFVRQVH+
Sbjct: 660 RYESRKKLAEQRPRVKGQFVRQVHI 684


>ref|XP_002321351.1| response regulator [Populus trichocarpa]
           gi|222868347|gb|EEF05478.1| response regulator [Populus
           trichocarpa]
          Length = 477

 Score =  112 bits (281), Expect = 6e-23
 Identities = 61/121 (50%), Positives = 78/121 (64%), Gaps = 12/121 (9%)
 Frame = +1

Query: 76  LEPIKDQTHLSSVSDQHGGGDFSNDISNRFNS---------RSNAVQFVKVAAEN---GK 219
           L+ ++ + H+SS +DQ     F N  ++ FNS          SNA Q   V+A +    +
Sbjct: 348 LDSLEGREHISSATDQSASSSFCNGAASHFNSIGYGSASGSYSNADQIATVSAASESKNE 407

Query: 220 ESNLIHDEKFQRSIQREAALAKFRLKRKERCFDKKVRYHSRSRLAEKRPRVKGQFVRQVH 399
           E    H+    RSIQREAAL KFRLKRKERC++KKVRY SR +LAE+RPRVKGQFVRQVH
Sbjct: 408 EGVFTHNSNSHRSIQREAALTKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVH 467

Query: 400 L 402
           +
Sbjct: 468 I 468


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