BLASTX nr result

ID: Bupleurum21_contig00023667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023667
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31582.3| unnamed protein product [Vitis vinifera]               92   8e-17
ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256...    92   8e-17
emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]    90   5e-16
ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|2...    84   3e-14
ref|XP_002311195.1| predicted protein [Populus trichocarpa] gi|2...    84   3e-14

>emb|CBI31582.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
 Frame = +3

Query: 192 NVSVRGGSVNRPLECRLSNMPV----HRQQCNVNSCVNGDGFVFPGGRRYIAAGGVGLRK 359
           +V +  G   RPL    S  P     H+ Q   +S           G R +  GG GL++
Sbjct: 95  SVGLESGRCGRPLGLPPSAWPPLQHQHQHQHQQSS----------SGMRAVFLGGSGLKR 144

Query: 360 KSAGTGVFLPRRYPDSIDCRVKSGCPSSFNTPKTAQELNVNYGNVMSQTKAQAPFMSGSI 539
           +SAGTGVFLPRR+ ++ D R K GC +     +  Q LN+N+ ++ S   +Q  F  G  
Sbjct: 145 ESAGTGVFLPRRFGNASDSRKKPGCSTVLLPARVVQALNLNFEDMGSH--SQPHFNGGVA 202

Query: 540 PDHDAMIMRRNAMLAQLRRNNMNMMPYGAMKGDMLPPEKWSY 665
           PD++A++ RRNA+++Q +R   N+ P G M  ++  P++W+Y
Sbjct: 203 PDYEALMARRNALISQQKR---NLRPEGTMNHEIRLPQEWTY 241


>ref|XP_002281465.1| PREDICTED: uncharacterized protein LOC100256408 [Vitis vinifera]
          Length = 417

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
 Frame = +3

Query: 192 NVSVRGGSVNRPLECRLSNMPV----HRQQCNVNSCVNGDGFVFPGGRRYIAAGGVGLRK 359
           +V +  G   RPL    S  P     H+ Q   +S           G R +  GG GL++
Sbjct: 271 SVGLESGRCGRPLGLPPSAWPPLQHQHQHQHQQSS----------SGMRAVFLGGSGLKR 320

Query: 360 KSAGTGVFLPRRYPDSIDCRVKSGCPSSFNTPKTAQELNVNYGNVMSQTKAQAPFMSGSI 539
           +SAGTGVFLPRR+ ++ D R K GC +     +  Q LN+N+ ++ S   +Q  F  G  
Sbjct: 321 ESAGTGVFLPRRFGNASDSRKKPGCSTVLLPARVVQALNLNFEDMGSH--SQPHFNGGVA 378

Query: 540 PDHDAMIMRRNAMLAQLRRNNMNMMPYGAMKGDMLPPEKWSY 665
           PD++A++ RRNA+++Q +R   N+ P G M  ++  P++W+Y
Sbjct: 379 PDYEALMARRNALISQQKR---NLRPEGTMNHEIRLPQEWTY 417


>emb|CAN66597.1| hypothetical protein VITISV_030013 [Vitis vinifera]
          Length = 425

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
 Frame = +3

Query: 192 NVSVRGGSVNRPLECRLSNMPV--HRQQCNVNSCVNGDGFVFPGGRRYIAAGGVGLRKKS 365
           +V +  G   RPL    S  P   H+ Q   +S           G R +  GG GL+++S
Sbjct: 281 SVGLESGRCGRPLGLPPSAWPPLQHQHQHQQSS----------SGMRAVFLGGSGLKRES 330

Query: 366 AGTGVFLPRRYPDSIDCRVKSGCPSSFNTPKTAQELNVNYGNVMSQTKAQAPFMSGSIPD 545
           AGTGVFLPRR+ +  D R K GC +     +  Q LN+N+ ++ S   +Q  F  G  PD
Sbjct: 331 AGTGVFLPRRFGNXSDSRKKPGCSTVLLPARVVQALNLNFEDMGSH--SQPHFNGGVAPD 388

Query: 546 HDAMIMRRNAMLAQLRRNNMNMMPYGAMKGDMLPPEKWSY 665
           ++A++ RRNA+++Q +R   N+ P   M  ++  P++W+Y
Sbjct: 389 YEALMARRNALISQQKR---NLRPEXTMNHEIRLPQEWTY 425


>ref|XP_002316248.1| predicted protein [Populus trichocarpa] gi|222865288|gb|EEF02419.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
 Frame = +3

Query: 123 VKQNCGSIWVQSPRVTA--------------DYSCGFNVSVRGGSVNRPLECRLSNMP-- 254
           ++Q C SIW +    T+                S G +V    G   RPL    S  P  
Sbjct: 230 LRQQCSSIWERQQVKTSWQAQPQFHQHQHQQVQSRGRDVRYEDGRCGRPLGLPQSAWPPL 289

Query: 255 -VHRQQCNVNSCVNGDGFVFPGGRRYIAAGGVGLRKKSAGTGVFLPRRYPDSIDCRVKSG 431
            VH Q  + NS           G R +  GG G++++ AGTGVFLPRRY +  D + KSG
Sbjct: 290 QVHPQNQHSNSA----------GMRAVFLGGSGVKRECAGTGVFLPRRYGNPPDPKKKSG 339

Query: 432 CPSSFNTPKTAQELNVNYGNVMSQTKAQAPFMSGSI--PDHDAMIMRRNAMLAQLRRNNM 605
           C +     K  Q LN+N+ ++     AQ    + +    ++DA++ RRNA+LAQ +R   
Sbjct: 340 CSTVLLPAKVVQALNLNFDDMDISGLAQPRLNNNASFHSEYDALMARRNALLAQQKR--- 396

Query: 606 NMMPYGAMKGDMLPPEKWSY 665
           N+     +  ++  P++W+Y
Sbjct: 397 NLRQENVLNREIRLPQEWTY 416


>ref|XP_002311195.1| predicted protein [Populus trichocarpa] gi|222851015|gb|EEE88562.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
 Frame = +3

Query: 123 VKQNCGSIWVQSPRVTA--------DYSCGFNVSVRGGSVN-------RPLECRLSNMP- 254
           +KQ C SIW +    T+         +S    +  RG S         R L    S  P 
Sbjct: 225 LKQQCSSIWERQQVKTSWQAQPRHHHHSHHHQIQSRGTSAGNENGRFVRSLGLPQSAWPP 284

Query: 255 --VHRQQCNVNSCVNGDGFVFPGGRRYIAAGGVGLRKKSAGTGVFLPRRYPDSIDCRVKS 428
             VH Q  + NS           G R +  GG G++++ AGTGVFLPRRY +  + + KS
Sbjct: 285 LQVHAQNQHTNSA----------GTRAVFPGGSGVKRECAGTGVFLPRRYSNPPEPKKKS 334

Query: 429 GCPSSFNTPKTAQELNVNYGNVMSQTKAQAPFMSGSI--PDHDAMIMRRNAMLAQLRRNN 602
           GCP+     K  Q LN+N+ ++     AQ    S +    D+DA+++RR+A++AQ +R  
Sbjct: 335 GCPAVLFPAKVVQALNLNFDDMDFNGLAQPRLNSNAAFPSDYDALMIRRSALVAQQKR-- 392

Query: 603 MNMMPYGAMKGDMLPPEKWSY 665
            N+     +  ++  P++W+Y
Sbjct: 393 -NLRQESVLNHEIRLPQEWTY 412


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