BLASTX nr result

ID: Bupleurum21_contig00023647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023647
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142770.1| PREDICTED: cystinosin homolog [Cucumis sativ...   142   4e-32
ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis l...   141   1e-31
ref|NP_198883.1| cystinosin [Arabidopsis thaliana] gi|13124057|s...   140   2e-31
gb|AAM63025.1| unknown [Arabidopsis thaliana]                         140   2e-31
ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|1...   135   5e-30

>ref|XP_004142770.1| PREDICTED: cystinosin homolog [Cucumis sativus]
           gi|449483821|ref|XP_004156702.1| PREDICTED: cystinosin
           homolog [Cucumis sativus]
          Length = 274

 Score =  142 bits (359), Expect = 4e-32
 Identities = 81/157 (51%), Positives = 92/157 (58%)
 Frame = +3

Query: 6   FSTIQVIMTVVKYIPQAIMNFRRKSTIGFSIGNIXXXXXXXXTXXXXXXXXXXXXXXXXX 185
           F++IQV MT +KYIPQAIMNF RKST GFSIGNI                          
Sbjct: 155 FNSIQVFMTAIKYIPQAIMNFLRKSTDGFSIGNILLDF---------------------- 192

Query: 186 XXXXXXXXXXXXXXXLGGLTNYAQMAVQSIDQHSWVNFYGNIGKTLLSLVSIFFDILFIL 365
                          LGGL NYAQMAVQSIDQ+SWVNFYGNIGKTLLSL+SIFFD+LF+L
Sbjct: 193 ---------------LGGLANYAQMAVQSIDQNSWVNFYGNIGKTLLSLISIFFDLLFML 237

Query: 366 QHYVFYPVKETAKASPVDVVSKEPLIDSSHNPNTIDV 476
           QHYV YP K    +   D  ++E LI     P + DV
Sbjct: 238 QHYVLYPGKRPIVSQKADDKTREALIAPPDRPQSEDV 274


>ref|XP_002870687.1| PQ-loop repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316523|gb|EFH46946.1| PQ-loop repeat family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 270

 Score =  141 bits (356), Expect = 1e-31
 Identities = 78/150 (52%), Positives = 89/150 (59%)
 Frame = +3

Query: 6   FSTIQVIMTVVKYIPQAIMNFRRKSTIGFSIGNIXXXXXXXXTXXXXXXXXXXXXXXXXX 185
           F++IQV MT VKYIPQA MNF RKST+G+SIGNI                          
Sbjct: 155 FNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFT--------------------- 193

Query: 186 XXXXXXXXXXXXXXXLGGLTNYAQMAVQSIDQHSWVNFYGNIGKTLLSLVSIFFDILFIL 365
                           GGL NY QM +QSIDQ+SW NFYGNIGKTLLSL+SIFFDILF+ 
Sbjct: 194 ----------------GGLANYLQMVIQSIDQNSWKNFYGNIGKTLLSLISIFFDILFMF 237

Query: 366 QHYVFYPVKETAKASPVDVVSKEPLIDSSH 455
           QHYV YP K+ +K+      S EPLIDSSH
Sbjct: 238 QHYVLYPEKKASKSLETGEESNEPLIDSSH 267


>ref|NP_198883.1| cystinosin [Arabidopsis thaliana]
           gi|13124057|sp|P57758.1|CTNS_ARATH RecName:
           Full=Cystinosin homolog gi|9758095|dbj|BAB08539.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|15529266|gb|AAK97727.1| AT5g40670/MNF13_190
           [Arabidopsis thaliana] gi|16974419|gb|AAL31135.1|
           AT5g40670/MNF13_190 [Arabidopsis thaliana]
           gi|332007197|gb|AED94580.1| cystinosin [Arabidopsis
           thaliana]
          Length = 270

 Score =  140 bits (354), Expect = 2e-31
 Identities = 77/150 (51%), Positives = 89/150 (59%)
 Frame = +3

Query: 6   FSTIQVIMTVVKYIPQAIMNFRRKSTIGFSIGNIXXXXXXXXTXXXXXXXXXXXXXXXXX 185
           F++IQV MT VKYIPQA MNF RKST+G+SIGNI                          
Sbjct: 155 FNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFT--------------------- 193

Query: 186 XXXXXXXXXXXXXXXLGGLTNYAQMAVQSIDQHSWVNFYGNIGKTLLSLVSIFFDILFIL 365
                           GGL NY QM +QSIDQ+SW NFYGN+GKTLLSL+SIFFDILF+ 
Sbjct: 194 ----------------GGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMF 237

Query: 366 QHYVFYPVKETAKASPVDVVSKEPLIDSSH 455
           QHYV YP K+ +K+      S EPLIDSSH
Sbjct: 238 QHYVLYPEKKVSKSPETGEESNEPLIDSSH 267


>gb|AAM63025.1| unknown [Arabidopsis thaliana]
          Length = 270

 Score =  140 bits (354), Expect = 2e-31
 Identities = 77/150 (51%), Positives = 89/150 (59%)
 Frame = +3

Query: 6   FSTIQVIMTVVKYIPQAIMNFRRKSTIGFSIGNIXXXXXXXXTXXXXXXXXXXXXXXXXX 185
           F++IQV MT VKYIPQA MNF RKST+G+SIGNI                          
Sbjct: 155 FNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFT--------------------- 193

Query: 186 XXXXXXXXXXXXXXXLGGLTNYAQMAVQSIDQHSWVNFYGNIGKTLLSLVSIFFDILFIL 365
                           GGL NY QM +QSIDQ+SW NFYGN+GKTLLSL+SIFFDILF+ 
Sbjct: 194 ----------------GGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMC 237

Query: 366 QHYVFYPVKETAKASPVDVVSKEPLIDSSH 455
           QHYV YP K+ +K+      S EPLIDSSH
Sbjct: 238 QHYVLYPEKKVSKSPETSEESNEPLIDSSH 267


>ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|118485298|gb|ABK94508.1|
           unknown [Populus trichocarpa]
           gi|222867000|gb|EEF04131.1| predicted protein [Populus
           trichocarpa]
          Length = 274

 Score =  135 bits (341), Expect = 5e-30
 Identities = 78/152 (51%), Positives = 90/152 (59%)
 Frame = +3

Query: 6   FSTIQVIMTVVKYIPQAIMNFRRKSTIGFSIGNIXXXXXXXXTXXXXXXXXXXXXXXXXX 185
           F++IQV MTV+KYIPQ IMNF RKST GFSIGNI                          
Sbjct: 155 FNSIQVFMTVIKYIPQVIMNFMRKSTDGFSIGNILLDC---------------------- 192

Query: 186 XXXXXXXXXXXXXXXLGGLTNYAQMAVQSIDQHSWVNFYGNIGKTLLSLVSIFFDILFIL 365
                          LGG+TNYAQMAVQSIDQ+SWVNFYGNIGKTLLSLVSIFFD++F+ 
Sbjct: 193 ---------------LGGVTNYAQMAVQSIDQNSWVNFYGNIGKTLLSLVSIFFDLVFMC 237

Query: 366 QHYVFYPVKETAKASPVDVVSKEPLIDSSHNP 461
           QHY+ YP +  A    ++    EPLI  S  P
Sbjct: 238 QHYILYP-ENKAVPPKLNKEGTEPLIRFSEEP 268


Top