BLASTX nr result

ID: Bupleurum21_contig00023628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023628
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323318.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_002532077.1| conserved hypothetical protein [Ricinus comm...   174   1e-41
ref|XP_002308029.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
ref|XP_003535921.1| PREDICTED: uncharacterized protein LOC100805...   168   6e-40
emb|CBI29841.3| unnamed protein product [Vitis vinifera]              163   1e-38

>ref|XP_002323318.1| predicted protein [Populus trichocarpa] gi|222867948|gb|EEF05079.1|
           predicted protein [Populus trichocarpa]
          Length = 771

 Score =  177 bits (448), Expect = 1e-42
 Identities = 84/113 (74%), Positives = 97/113 (85%)
 Frame = -2

Query: 555 MKSDMSLTICSSEVFYIPRRFVTDYIDLVNLVGNLDIHQKVAIPMMFLSMDSADNFDSIF 376
           MKSD SL I SSE+FYIP+ F+TD++DLV LVG+LDIHQKVAIPM F+SMDS  NFDS+ 
Sbjct: 659 MKSDQSLVIGSSEIFYIPQHFITDFVDLVGLVGDLDIHQKVAIPMFFMSMDSPQNFDSVL 718

Query: 375 NTMVYKRKQPSNSTTFYSPKAPAVHPWNVSSEQDFIKLIRTMAAGDPLLMELV 217
           +TMVYKRK P +++T YS + PAVHPWNVSSEQDFIKLIR MA GDPLLMELV
Sbjct: 719 STMVYKRKPPPDNSTLYSAQVPAVHPWNVSSEQDFIKLIRIMAEGDPLLMELV 771


>ref|XP_002532077.1| conserved hypothetical protein [Ricinus communis]
            gi|223528259|gb|EEF30311.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 814

 Score =  174 bits (440), Expect = 1e-41
 Identities = 80/113 (70%), Positives = 97/113 (85%)
 Frame = -2

Query: 555  MKSDMSLTICSSEVFYIPRRFVTDYIDLVNLVGNLDIHQKVAIPMMFLSMDSADNFDSIF 376
            MK+D S+TICSSE+FYIPR FV D++DLV+LVG+ +IH  +AIPM F+SMDS  NFDS+ 
Sbjct: 702  MKNDQSITICSSEIFYIPRHFVPDFVDLVSLVGDQEIHNNIAIPMFFVSMDSPQNFDSVL 761

Query: 375  NTMVYKRKQPSNSTTFYSPKAPAVHPWNVSSEQDFIKLIRTMAAGDPLLMELV 217
            +TMVYKRK PSN++T Y+ +A AVHPWNVSSEQDFIKL+R MA GDPLLMELV
Sbjct: 762  STMVYKRKPPSNNSTLYNAQASAVHPWNVSSEQDFIKLVRIMAEGDPLLMELV 814


>ref|XP_002308029.1| predicted protein [Populus trichocarpa] gi|222854005|gb|EEE91552.1|
           predicted protein [Populus trichocarpa]
          Length = 771

 Score =  170 bits (430), Expect = 2e-40
 Identities = 82/112 (73%), Positives = 95/112 (84%)
 Frame = -2

Query: 555 MKSDMSLTICSSEVFYIPRRFVTDYIDLVNLVGNLDIHQKVAIPMMFLSMDSADNFDSIF 376
           MKSD SL I SSE+FYIP++ VTD++DLV LVG+L+IHQKVAIPM F+SMDS  NFDS+ 
Sbjct: 659 MKSDQSLVIGSSEIFYIPQQLVTDFVDLVGLVGDLNIHQKVAIPMFFMSMDSPQNFDSVL 718

Query: 375 NTMVYKRKQPSNSTTFYSPKAPAVHPWNVSSEQDFIKLIRTMAAGDPLLMEL 220
           +TMVYK K P  ++TFYS +APAVHPWNVSSEQDFIKL R MA GDPLLMEL
Sbjct: 719 STMVYKPKPPPANSTFYSAQAPAVHPWNVSSEQDFIKLTRIMAEGDPLLMEL 770


>ref|XP_003535921.1| PREDICTED: uncharacterized protein LOC100805551 [Glycine max]
          Length = 759

 Score =  168 bits (425), Expect = 6e-40
 Identities = 76/111 (68%), Positives = 96/111 (86%)
 Frame = -2

Query: 549 SDMSLTICSSEVFYIPRRFVTDYIDLVNLVGNLDIHQKVAIPMMFLSMDSADNFDSIFNT 370
           +D +L ICSSEVFY+P+R ++D+++LVNLVG+L+IHQKVAIPM F+S+DS  NFD + +T
Sbjct: 649 NDKNLLICSSEVFYVPQRLISDFVELVNLVGDLEIHQKVAIPMFFVSLDSPQNFDPVLDT 708

Query: 369 MVYKRKQPSNSTTFYSPKAPAVHPWNVSSEQDFIKLIRTMAAGDPLLMELV 217
           M+YK+  P+NSTT YS K PAVHPW+VSSEQ+FIKLIR MA GDPLLMELV
Sbjct: 709 MIYKQNPPANSTTLYSAKVPAVHPWSVSSEQEFIKLIRIMAEGDPLLMELV 759


>emb|CBI29841.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/114 (69%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
 Frame = -2

Query: 555 MKSDMSLTICSSEVFYIPRRFVTDYIDLVNLVGNLDIHQKVAIPMMFLSMDSADNFDSIF 376
           + SD  LT+CSS+VFYIPRRF+ D+ +LVNLV NL+IH KVAIPM FLSMDS  NFD + 
Sbjct: 613 INSDQLLTVCSSDVFYIPRRFIADFTELVNLVDNLEIHHKVAIPMFFLSMDSPQNFDPVL 672

Query: 375 NTMVYKRKQPS-NSTTFYSPKAPAVHPWNVSSEQDFIKLIRTMAAGDPLLMELV 217
           + M+Y+   PS NS+TFYS K PAVHPWNVSSEQ+FIKLIR MAAGD LL+ELV
Sbjct: 673 SRMIYEENPPSTNSSTFYSDKVPAVHPWNVSSEQEFIKLIRIMAAGDLLLLELV 726


Top