BLASTX nr result
ID: Bupleurum21_contig00023605
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00023605 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270719.2| PREDICTED: uncharacterized protein LOC100243... 66 3e-09 emb|CBI31232.3| unnamed protein product [Vitis vinifera] 66 3e-09 emb|CAN79168.1| hypothetical protein VITISV_028064 [Vitis vinifera] 65 4e-09 ref|XP_002337003.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_002878479.1| double-stranded RNA-binding domain (dsrbd)-c... 59 3e-07 >ref|XP_002270719.2| PREDICTED: uncharacterized protein LOC100243264 [Vitis vinifera] Length = 495 Score = 65.9 bits (159), Expect = 3e-09 Identities = 35/53 (66%), Positives = 43/53 (81%) Frame = +2 Query: 2 EKSGPPHLPNFVSTVEIGGKSFKGQIAKTKKIAEMNAAKAAYICLTDQERQSS 160 EKSG H+P F+STVEI G++F GQ AKTKK+AEMNAAKAAY L +ER+S+ Sbjct: 260 EKSGVSHMPTFLSTVEIEGETFVGQKAKTKKLAEMNAAKAAYTHL--KERRSN 310 >emb|CBI31232.3| unnamed protein product [Vitis vinifera] Length = 494 Score = 65.9 bits (159), Expect = 3e-09 Identities = 35/53 (66%), Positives = 43/53 (81%) Frame = +2 Query: 2 EKSGPPHLPNFVSTVEIGGKSFKGQIAKTKKIAEMNAAKAAYICLTDQERQSS 160 EKSG H+P F+STVEI G++F GQ AKTKK+AEMNAAKAAY L +ER+S+ Sbjct: 259 EKSGVSHMPTFLSTVEIEGETFVGQKAKTKKLAEMNAAKAAYTHL--KERRSN 309 >emb|CAN79168.1| hypothetical protein VITISV_028064 [Vitis vinifera] Length = 292 Score = 65.5 bits (158), Expect = 4e-09 Identities = 32/49 (65%), Positives = 40/49 (81%) Frame = +2 Query: 2 EKSGPPHLPNFVSTVEIGGKSFKGQIAKTKKIAEMNAAKAAYICLTDQE 148 EKSG H+P F+STVEI G++F GQ AKTKK+AEMNAAKAAY L +++ Sbjct: 244 EKSGVSHMPTFLSTVEIEGETFVGQKAKTKKLAEMNAAKAAYTHLKERK 292 >ref|XP_002337003.1| predicted protein [Populus trichocarpa] gi|222837556|gb|EEE75921.1| predicted protein [Populus trichocarpa] Length = 330 Score = 59.7 bits (143), Expect = 2e-07 Identities = 34/57 (59%), Positives = 39/57 (68%) Frame = +2 Query: 2 EKSGPPHLPNFVSTVEIGGKSFKGQIAKTKKIAEMNAAKAAYICLTDQERQSSSVTG 172 +KSG H+P FVS VEI G+ F GQ AKTKK AEM+AAK AY L Q+R SS G Sbjct: 104 DKSGEAHVPTFVSKVEIEGEIFTGQGAKTKKQAEMSAAKIAYTAL--QQRYSSQSPG 158 >ref|XP_002878479.1| double-stranded RNA-binding domain (dsrbd)-containing protein 4 [Arabidopsis lyrata subsp. lyrata] gi|297324317|gb|EFH54738.1| double-stranded RNA-binding domain (dsrbd)-containing protein 4 [Arabidopsis lyrata subsp. lyrata] Length = 343 Score = 59.3 bits (142), Expect = 3e-07 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 20/98 (20%) Frame = +2 Query: 8 SGPPHLPNFVSTVEIGGKSFKGQIAKTKKIAEMNAAKAAYICLTD--------------- 142 SGP H P F+STVE GK F G AKTKK+AEM+AAK A++ + + Sbjct: 96 SGPSHSPTFISTVEFAGKVFTGDEAKTKKLAEMSAAKIAFMSIKNGNSNQTSSPSLSCER 155 Query: 143 QERQSSSVTGT-----SEVSPVILQPTVIERVKVVATD 241 QE SS+V + S+ S V++ P ++ V+ D Sbjct: 156 QEAASSNVKSSLQEIHSQPSKVVMTPDAPSKLMKVSED 193