BLASTX nr result

ID: Bupleurum21_contig00023590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023590
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...   166   2e-63
gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriand...   136   3e-57
gb|ADG26669.1| homogentisate geranylgeranyl transferase [Foenicu...   162   7e-47
gb|ADG26672.1| homogentisate geranylgeranyl transferase, partial...   161   2e-43
emb|CBI21093.3| unnamed protein product [Vitis vinifera]              111   8e-43

>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score =  166 bits (420), Expect(2) = 2e-63
 Identities = 84/106 (79%), Positives = 90/106 (84%)
 Frame = -2

Query: 318 YYIASLFVSSLELHIDLPLFRWKRNAFLAAMCIVIVRAITVQLTVFYHI*MYVLGRPVAF 139
           Y +   F       ID+PLFRWK+NAFLAAMCIVIVRAITVQLTVFYHI  YVLGRPV F
Sbjct: 132 YCLLVCFFFGTAYSIDVPLFRWKKNAFLAAMCIVIVRAITVQLTVFYHIQQYVLGRPVLF 191

Query: 138 SRSLAFAIICISLFVTVIALFKDIPDEDGDKDFGIQTITVILGKKR 1
           SRSLAFAIIC++LFVTVIALFKDIPD DGD+DFGIQTITV LGKKR
Sbjct: 192 SRSLAFAIICMTLFVTVIALFKDIPDVDGDRDFGIQTITVTLGKKR 237



 Score =  102 bits (253), Expect(2) = 2e-63
 Identities = 50/54 (92%), Positives = 52/54 (96%)
 Frame = -3

Query: 548 EVMIPIVCVNIYVVGLNQLFDVEIDKVNKPNLPIASGEYSMELGKAIVLAFGLM 387
           +VMIPIVCVNIYVVGLNQL+DVEIDKVNKPNLPIASGEYSME GKAIV AFGLM
Sbjct: 64  KVMIPIVCVNIYVVGLNQLYDVEIDKVNKPNLPIASGEYSMETGKAIVSAFGLM 117


>gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriandrum sativum]
          Length = 401

 Score =  136 bits (343), Expect(3) = 3e-57
 Identities = 65/92 (70%), Positives = 76/92 (82%)
 Frame = -2

Query: 276 IDLPLFRWKRNAFLAAMCIVIVRAITVQLTVFYHI*MYVLGRPVAFSRSLAFAIICISLF 97
           ++LPL RWKRNAFLAA  I++VRAITV L  FYHI  YVLGRP+ F RSL FA +CIS+F
Sbjct: 230 VELPLLRWKRNAFLAAFSILMVRAITVNLAFFYHIQKYVLGRPMVFPRSLCFATVCISMF 289

Query: 96  VTVIALFKDIPDEDGDKDFGIQTITVILGKKR 1
            TVIALFKDIPD DGD+DFGIQ+ +V LG+KR
Sbjct: 290 TTVIALFKDIPDVDGDRDFGIQSFSVCLGQKR 321



 Score = 90.9 bits (224), Expect(3) = 3e-57
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = -3

Query: 548 EVMIPIVCVNIYVVGLNQLFDVEIDKVNKPNLPIASGEYSMELGKAIVLAFGLM 387
           + +IP + +NIYVVGLNQLFDVEIDKVNKPNLP+ASGEYSM LGKAIV AFGLM
Sbjct: 148 KALIPSIFMNIYVVGLNQLFDVEIDKVNKPNLPLASGEYSMGLGKAIVSAFGLM 201



 Score = 41.2 bits (95), Expect(3) = 3e-57
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = -1

Query: 355 SIVMGIISRSPPVLYCILICFFFGTAY 275
           S  MGI+ +SPPV + +LICF FG+AY
Sbjct: 202 SFAMGIVFQSPPVFFALLICFLFGSAY 228


>gb|ADG26669.1| homogentisate geranylgeranyl transferase [Foeniculum vulgare]
          Length = 186

 Score =  162 bits (409), Expect(2) = 7e-47
 Identities = 80/92 (86%), Positives = 86/92 (93%)
 Frame = -2

Query: 276 IDLPLFRWKRNAFLAAMCIVIVRAITVQLTVFYHI*MYVLGRPVAFSRSLAFAIICISLF 97
           ID+PLFRWK+NAFLAA CIVIVRAITVQLTVFYHI  YVLGRPV F+RSLAFAIIC++LF
Sbjct: 36  IDVPLFRWKKNAFLAATCIVIVRAITVQLTVFYHIQQYVLGRPVIFTRSLAFAIICMTLF 95

Query: 96  VTVIALFKDIPDEDGDKDFGIQTITVILGKKR 1
           VTVIALFKDIPD DGD+DFGIQTITV LGKKR
Sbjct: 96  VTVIALFKDIPDVDGDRDFGIQTITVTLGKKR 127



 Score = 50.8 bits (120), Expect(2) = 7e-47
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = -1

Query: 355 SIVMGIISRSPPVLYCILICFFFGTAY 275
           SI+MGI+ +SPPVLYC+L+C FFGTAY
Sbjct: 8   SIIMGIMFQSPPVLYCLLVCIFFGTAY 34


>gb|ADG26672.1| homogentisate geranylgeranyl transferase, partial [Pimpinella
           anisum]
          Length = 168

 Score =  161 bits (408), Expect(2) = 2e-43
 Identities = 79/92 (85%), Positives = 87/92 (94%)
 Frame = -2

Query: 276 IDLPLFRWKRNAFLAAMCIVIVRAITVQLTVFYHI*MYVLGRPVAFSRSLAFAIICISLF 97
           ID+PLFRWK+NAFLAA+CIVIVRAITVQLTVFYHI  YVLGRPV FSRSLAFAIIC++LF
Sbjct: 20  IDVPLFRWKKNAFLAALCIVIVRAITVQLTVFYHIQQYVLGRPVPFSRSLAFAIICMTLF 79

Query: 96  VTVIALFKDIPDEDGDKDFGIQTITVILGKKR 1
           VTVIALFKDIPD DGD+DFGIQT++V LGKKR
Sbjct: 80  VTVIALFKDIPDVDGDRDFGIQTMSVTLGKKR 111



 Score = 40.0 bits (92), Expect(2) = 2e-43
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 328 SPPVLYCILICFFFGTAY 275
           SPPVL C+L+CFFFGTAY
Sbjct: 1   SPPVLLCLLVCFFFGTAY 18


>emb|CBI21093.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  111 bits (277), Expect(3) = 8e-43
 Identities = 54/100 (54%), Positives = 71/100 (71%)
 Frame = -2

Query: 300 FVSSLELHIDLPLFRWKRNAFLAAMCIVIVRAITVQLTVFYHI*MYVLGRPVAFSRSLAF 121
           F+      I++PL RWKR   LAA CI+IVRAI VQL  F HI  +VLGR + +++S+ F
Sbjct: 194 FLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLGRSIVYTKSVVF 253

Query: 120 AIICISLFVTVIALFKDIPDEDGDKDFGIQTITVILGKKR 1
            +  +  F TVIALFKDIPD DGD++FGIQ+ TV LG+K+
Sbjct: 254 GVAFMCFFSTVIALFKDIPDVDGDREFGIQSFTVKLGQKK 293



 Score = 75.9 bits (185), Expect(3) = 8e-43
 Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = -3

Query: 548 EVMIPIVCVNIYVVGLNQLFDVEIDKVNKPNLPIASGEYSMELGKAIVLAFGLM-IGASL 372
           + M+P V +NIYVVGLNQ+FDVEIDKVNKP LP+ASG++SME G  IV    LM +G  +
Sbjct: 120 KAMVPSVLMNIYVVGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGI 179

Query: 371 CHQ 363
             Q
Sbjct: 180 MFQ 182



 Score = 32.7 bits (73), Expect(3) = 8e-43
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -1

Query: 355 SIVMGIISRSPPVLYCILICFFFGTAY 275
           S+ MGI+ +SPP+   +LI F  GTAY
Sbjct: 174 SVGMGIMFQSPPLFCALLISFLLGTAY 200


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