BLASTX nr result

ID: Bupleurum21_contig00023579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023579
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272496.1| PREDICTED: 60S ribosomal protein L38 isoform...    64   1e-08
ref|XP_002272538.1| PREDICTED: 60S ribosomal protein L38 isoform...    64   1e-08
ref|XP_002462980.1| hypothetical protein SORBIDRAFT_02g035760 [S...    64   1e-08
ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [G...    64   2e-08
ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycin...    64   2e-08

>ref|XP_002272496.1| PREDICTED: 60S ribosomal protein L38 isoform 1 [Vitis vinifera]
          Length = 69

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   CSKYLYTLCVHDAEKAEKLKQSLPPGLSVQDI 98
           CSKYLYTLCV DAEKA+KLKQSLPPGLSVQD+
Sbjct: 38  CSKYLYTLCVFDAEKADKLKQSLPPGLSVQDL 69


>ref|XP_002272538.1| PREDICTED: 60S ribosomal protein L38 isoform 2 [Vitis vinifera]
           gi|297743847|emb|CBI36730.3| unnamed protein product
           [Vitis vinifera]
          Length = 96

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   CSKYLYTLCVHDAEKAEKLKQSLPPGLSVQDI 98
           CSKYLYTLCV DAEKA+KLKQSLPPGLSVQD+
Sbjct: 65  CSKYLYTLCVFDAEKADKLKQSLPPGLSVQDL 96


>ref|XP_002462980.1| hypothetical protein SORBIDRAFT_02g035760 [Sorghum bicolor]
           gi|241926357|gb|EER99501.1| hypothetical protein
           SORBIDRAFT_02g035760 [Sorghum bicolor]
          Length = 69

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   CSKYLYTLCVHDAEKAEKLKQSLPPGLSVQDI 98
           CSKYLYTLCVHDA+KA KLKQSLPPGL+VQ+I
Sbjct: 38  CSKYLYTLCVHDADKANKLKQSLPPGLTVQEI 69


>ref|XP_003546983.1| PREDICTED: 60S ribosomal protein L38-like [Glycine max]
          Length = 100

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   CSKYLYTLCVHDAEKAEKLKQSLPPGLSVQDI 98
           CSKYLYTLCV D+EKA+KLKQSLPPGLSVQD+
Sbjct: 69  CSKYLYTLCVFDSEKADKLKQSLPPGLSVQDV 100


>ref|XP_003543572.1| PREDICTED: 60S ribosomal protein L38 [Glycine max]
          Length = 69

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +3

Query: 3   CSKYLYTLCVHDAEKAEKLKQSLPPGLSVQDI 98
           CSKYLYTLCV D+EKA+KLKQSLPPGLSVQD+
Sbjct: 38  CSKYLYTLCVFDSEKADKLKQSLPPGLSVQDV 69


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